RNA–Protein interactions for RNA: ENST00000532268.1

SRPRA-207, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 829 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-207ENST00000532268 NISCHQ9Y2I1 1504 aa22.13■■□□□ 1.13
SRPRA-207ENST00000532268 CCDC180Q9P1Z9 1646 aa19.45■□□□□ 0.7
SRPRA-207ENST00000532268 ABCC9O60706 1549 aa18.96■□□□□ 0.63
SRPRA-207ENST00000532268 DCAF8L2P0C7V8 631 aa18.55■□□□□ 0.56
SRPRA-207ENST00000532268 ZCCHC6Q5VYS8 1495 aaKnown RBP18.51■□□□□ 0.55
SRPRA-207ENST00000532268 RB1CC1Q8TDY2 1594 aa18.26■□□□□ 0.51
SRPRA-207ENST00000532268 DCAF1Q9Y4B6 1507 aa18.26■□□□□ 0.51
SRPRA-207ENST00000532268 NACADO15069 1562 aa18.24■□□□□ 0.51
SRPRA-207ENST00000532268 MYO15BQ96JP2 1530 aa18.16■□□□□ 0.5
SRPRA-207ENST00000532268 SHROOM4Q9ULL8 1493 aa17.92■□□□□ 0.46
SRPRA-207ENST00000532268 SCRIBQ14160 1630 aa17.9■□□□□ 0.46
SRPRA-207ENST00000532268 UNC13AQ9UPW8 1703 aa17.86■□□□□ 0.45
SRPRA-207ENST00000532268 PABPN1Q86U42 306 aaKnown RBP eCLIP17.74■□□□□ 0.43
SRPRA-207ENST00000532268 BICRAQ9NZM4 1560 aa17.7■□□□□ 0.42
SRPRA-207ENST00000532268 DNAJC5BQ9UF47 199 aa17.61■□□□□ 0.41
SRPRA-207ENST00000532268 CECR2Q9BXF3 1484 aa17.22■□□□□ 0.35
SRPRA-207ENST00000532268 EIF4G1Q04637 1599 aaKnown RBP17.22■□□□□ 0.35
SRPRA-207ENST00000532268 CC2D2AQ9P2K1 1620 aa17.17■□□□□ 0.34
SRPRA-207ENST00000532268 BAZ1AQ9NRL2 1556 aaPredicted RBP17.14■□□□□ 0.33
SRPRA-207ENST00000532268 SUPT5HO00267 1087 aaKnown RBP17.09■□□□□ 0.33
SRPRA-207ENST00000532268 SMARCA4P51532 1647 aa17.09■□□□□ 0.33
SRPRA-207ENST00000532268 MROH2BQ7Z745 1585 aa17.08■□□□□ 0.32
SRPRA-207ENST00000532268 RSF1Q96T23 1441 aaPredicted RBP17.04■□□□□ 0.32
SRPRA-207ENST00000532268 WIZO95785 1651 aa16.93■□□□□ 0.3
SRPRA-207ENST00000532268 SMARCA2P51531 1590 aa16.9■□□□□ 0.3
SRPRA-207ENST00000532268 ATAD2BQ9ULI0 1458 aa16.89■□□□□ 0.29
SRPRA-207ENST00000532268 NCAPD3P42695 1498 aa16.84■□□□□ 0.29
SRPRA-207ENST00000532268 PEG3Q9GZU2 1588 aa16.84■□□□□ 0.29
SRPRA-207ENST00000532268 BAZ1BQ9UIG0 1483 aaKnown RBP16.83■□□□□ 0.28
SRPRA-207ENST00000532268 TOP2AP11388 1531 aaKnown RBP16.75■□□□□ 0.27
SRPRA-207ENST00000532268 HMGXB3Q12766 1538 aa16.75■□□□□ 0.27
SRPRA-207ENST00000532268 CCDC88BA6NC98 1476 aa16.58■□□□□ 0.24
SRPRA-207ENST00000532268 DNAJC5Q9H3Z4 198 aa16.47■□□□□ 0.23
SRPRA-207ENST00000532268 NESP48681 1621 aa16.41■□□□□ 0.22
SRPRA-207ENST00000532268 LAMC3Q9Y6N6 1575 aa16.38■□□□□ 0.21
SRPRA-207ENST00000532268 CADPSQ9ULU8 1353 aa16.38■□□□□ 0.21
SRPRA-207ENST00000532268 ERCC6Q03468 1493 aa16.36■□□□□ 0.21
SRPRA-207ENST00000532268 CFTRP13569 1480 aa16.33■□□□□ 0.2
SRPRA-207ENST00000532268 PDS5BQ9NTI5 1447 aa16.29■□□□□ 0.2
SRPRA-207ENST00000532268 KIF21AQ7Z4S6 1674 aa16.23■□□□□ 0.19
SRPRA-207ENST00000532268 PRDM2Q13029 1718 aa16.21■□□□□ 0.19
SRPRA-207ENST00000532268 CUX2O14529 1486 aa16.21■□□□□ 0.19
SRPRA-207ENST00000532268 FANCD2Q9BXW9 1451 aa16.2■□□□□ 0.18
SRPRA-207ENST00000532268 CEP164Q9UPV0 1460 aa16.16■□□□□ 0.18
SRPRA-207ENST00000532268 THOC2Q8NI27 1593 aaKnown RBP16.14■□□□□ 0.17
SRPRA-207ENST00000532268 ABCC8Q09428 1581 aa16.13■□□□□ 0.17
SRPRA-207ENST00000532268 CHIC1Q5VXU3 224 aa16.1■□□□□ 0.17
SRPRA-207ENST00000532268 WRNQ14191 1432 aaPredicted RBP eCLIP16.09■□□□□ 0.17
SRPRA-207ENST00000532268 MRC2Q9UBG0 1479 aa16.09■□□□□ 0.17
SRPRA-207ENST00000532268 TRIM41Q8WV44 630 aa16.08■□□□□ 0.16
SRPRA-207ENST00000532268 WDR62O43379 1518 aa16.02■□□□□ 0.15
SRPRA-207ENST00000532268 CUX1P39880 1505 aa16■□□□□ 0.15
SRPRA-207ENST00000532268 SYNJ1O43426 1573 aa16■□□□□ 0.15
SRPRA-207ENST00000532268 DNMBPQ6XZF7 1577 aa15.99■□□□□ 0.15
SRPRA-207ENST00000532268 URB2Q14146 1524 aaKnown RBP15.99■□□□□ 0.15
SRPRA-207ENST00000532268 TOPBP1Q92547 1522 aa15.97■□□□□ 0.15
SRPRA-207ENST00000532268 TOP2BQ02880 1626 aa15.95■□□□□ 0.14
SRPRA-207ENST00000532268 BIVM-ERCC5R4GMW8 1640 aa15.94■□□□□ 0.14
SRPRA-207ENST00000532268 FGD5Q6ZNL6 1462 aa15.91■□□□□ 0.14
SRPRA-207ENST00000532268 POLA1P09884 1462 aaPredicted RBP15.86■□□□□ 0.13
SRPRA-207ENST00000532268 SOGA1O94964 1423 aa15.85■□□□□ 0.13
SRPRA-207ENST00000532268 RAD54L2Q9Y4B4 1467 aa15.83■□□□□ 0.12
SRPRA-207ENST00000532268 FAM9AQ8IZU1 332 aaPredicted RBP15.81■□□□□ 0.12
SRPRA-207ENST00000532268 IFT140Q96RY7 1462 aa15.78■□□□□ 0.12
SRPRA-207ENST00000532268 ABCA10Q8WWZ4 1543 aa15.73■□□□□ 0.11
SRPRA-207ENST00000532268 KIF27Q86VH2 1401 aa15.73■□□□□ 0.11
SRPRA-207ENST00000532268 TDRD9Q8NDG6 1382 aaKnown RBP15.73■□□□□ 0.11
SRPRA-207ENST00000532268 TARBP1Q13395 1621 aaKnown RBP15.72■□□□□ 0.11
SRPRA-207ENST00000532268 RUSC2Q8N2Y8 1516 aa15.69■□□□□ 0.1
SRPRA-207ENST00000532268 ZNF608Q9ULD9 1512 aaPredicted RBP15.69■□□□□ 0.1
SRPRA-207ENST00000532268 WDR97A6NE52 1622 aa15.68■□□□□ 0.1
SRPRA-207ENST00000532268 EEA1Q15075 1411 aa15.68■□□□□ 0.1
SRPRA-207ENST00000532268 AQRO60306 1485 aaKnown RBP eCLIP15.66■□□□□ 0.12e-8■■■■■ 36.6
SRPRA-207ENST00000532268 GAPVD1Q14C86 1478 aa15.66■□□□□ 0.1
SRPRA-207ENST00000532268 CSRNP3Q8WYN3 585 aa15.64■□□□□ 0.09
SRPRA-207ENST00000532268 EHMT2Q96KQ7 1210 aa15.64■□□□□ 0.09
SRPRA-207ENST00000532268 EIF4G3O43432 1585 aaKnown RBP15.62■□□□□ 0.09
SRPRA-207ENST00000532268 ABCA5Q8WWZ7 1642 aa15.61■□□□□ 0.09
SRPRA-207ENST00000532268 GRIN2BQ13224 1484 aa15.59■□□□□ 0.09
SRPRA-207ENST00000532268 OSCARQ8IYS5 282 aa15.59■□□□□ 0.09
SRPRA-207ENST00000532268 IGF1RP08069 1367 aa15.58■□□□□ 0.08
SRPRA-207ENST00000532268 PBRM1Q86U86 1689 aa15.57■□□□□ 0.08
SRPRA-207ENST00000532268 ERICH3Q5RHP9 1530 aa15.55■□□□□ 0.08
SRPRA-207ENST00000532268 SNAPC4Q5SXM2 1469 aa15.53■□□□□ 0.08
SRPRA-207ENST00000532268 CARMIL1Q5VZK9 1371 aa15.53■□□□□ 0.08
SRPRA-207ENST00000532268 FBLN2P98095 1184 aa15.52■□□□□ 0.08
SRPRA-207ENST00000532268 CUL7Q14999 1698 aa15.51■□□□□ 0.07
SRPRA-207ENST00000532268 LOC105371045A0A1W2PR82 267 aa15.49■□□□□ 0.07
SRPRA-207ENST00000532268 UBTFP17480 764 aaKnown RBP15.49■□□□□ 0.07
SRPRA-207ENST00000532268 MAGI1Q96QZ7 1491 aaPredicted RBP15.48■□□□□ 0.07
SRPRA-207ENST00000532268 CHMP7Q8WUX9 453 aaPredicted RBP15.48■□□□□ 0.07
SRPRA-207ENST00000532268 FHAD1B1AJZ9 1412 aa15.48■□□□□ 0.07
SRPRA-207ENST00000532268 RAPGEF2Q9Y4G8 1499 aa15.47■□□□□ 0.07
SRPRA-207ENST00000532268 ADAMTS12P58397 1594 aa15.47■□□□□ 0.07
SRPRA-207ENST00000532268 GOLGA3Q08378 1498 aa15.46■□□□□ 0.07
SRPRA-207ENST00000532268 PRXQ9BXM0 1461 aa15.46■□□□□ 0.07
SRPRA-207ENST00000532268 CHD1O14646 1710 aa15.46■□□□□ 0.07
SRPRA-207ENST00000532268 KIF21BO75037 1637 aa15.46■□□□□ 0.06
SRPRA-207ENST00000532268 AEBP2Q6ZN18 517 aaPredicted RBP15.45■□□□□ 0.06
SRPRA-207ENST00000532268 SYNJ2O15056 1496 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms