RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 RUSC2Q8N2Y8 1516 aa37.51■■■■□ 3.59
CHKA-206ENST00000531341 FAM69CQ0P6D2 419 aa37.43■■■■□ 3.58
CHKA-206ENST00000531341 ABCC10Q5T3U5 1492 aa37.38■■■■□ 3.57
CHKA-206ENST00000531341 NPM1P06748 294 aaKnown RBP eCLIP37.36■■■■□ 3.57
CHKA-206ENST00000531341 IGF1RP08069 1367 aa37.36■■■■□ 3.57
CHKA-206ENST00000531341 ADCY10Q96PN6 1610 aa37.32■■■■□ 3.57
CHKA-206ENST00000531341 MAPKBP1O60336 1514 aa37.31■■■■□ 3.56
CHKA-206ENST00000531341 KIAA0586Q9BVV6 1533 aa37.29■■■■□ 3.56
CHKA-206ENST00000531341 DIP2BQ9P265 1576 aa37.25■■■■□ 3.55
CHKA-206ENST00000531341 KIF27Q86VH2 1401 aa37.22■■■■□ 3.55
CHKA-206ENST00000531341 CUL7Q14999 1698 aa37.13■■■■□ 3.53
CHKA-206ENST00000531341 TTBK1Q5TCY1 1321 aaPredicted RBP37.09■■■■□ 3.53
CHKA-206ENST00000531341 CARMIL1Q5VZK9 1371 aa37.06■■■■□ 3.52
CHKA-206ENST00000531341 PTPRGP23470 1445 aa37.06■■■■□ 3.52
CHKA-206ENST00000531341 KDM6BO15054 1643 aa37.01■■■■□ 3.52
CHKA-206ENST00000531341 KDM4FA0A1W2PPD8 638 aa37.01■■■■□ 3.52
CHKA-206ENST00000531341 TSPOAP1O95153 1857 aa37■■■■□ 3.51
CHKA-206ENST00000531341 TNIKQ9UKE5 1360 aa36.94■■■■□ 3.5
CHKA-206ENST00000531341 CARMIL2Q6F5E8 1435 aa36.9■■■■□ 3.5
CHKA-206ENST00000531341 ABCC2Q92887 1545 aa36.89■■■■□ 3.5
CHKA-206ENST00000531341 ASXL2Q76L83 1435 aa36.85■■■■□ 3.49
CHKA-206ENST00000531341 IQGAP2Q13576 1575 aa36.84■■■■□ 3.49
CHKA-206ENST00000531341 DISP1Q96F81 1524 aa36.79■■■■□ 3.48
CHKA-206ENST00000531341 UHRF1BP1LA0JNW5 1464 aa36.76■■■■□ 3.48
CHKA-206ENST00000531341 PLB1Q6P1J6 1458 aa36.76■■■■□ 3.48
CHKA-206ENST00000531341 UACAQ9BZF9 1416 aa36.76■■■■□ 3.47
CHKA-206ENST00000531341 PPRC1Q5VV67 1664 aaKnown RBP36.74■■■■□ 3.47
CHKA-206ENST00000531341 GLI2P10070 1586 aa36.73■■■■□ 3.47
CHKA-206ENST00000531341 COL17A1Q9UMD9 1497 aaPredicted RBP36.63■■■■□ 3.45
CHKA-206ENST00000531341 RAPGEF2Q9Y4G8 1499 aa36.63■■■■□ 3.45
CHKA-206ENST00000531341 KDM5BQ9UGL1 1544 aa36.62■■■■□ 3.45
CHKA-206ENST00000531341 EPRSP07814 1512 aaKnown RBP36.61■■■■□ 3.45
CHKA-206ENST00000531341 UGGT2Q9NYU1 1516 aa36.61■■■■□ 3.45
CHKA-206ENST00000531341 KIAA0556O60303 1618 aa36.53■■■■□ 3.44
CHKA-206ENST00000531341 ZCCHC11Q5TAX3 1644 aaKnown RBP36.53■■■■□ 3.44
CHKA-206ENST00000531341 MAP3K4Q9Y6R4 1608 aa36.52■■■■□ 3.44
CHKA-206ENST00000531341 ADGRL1O94910 1474 aa36.5■■■■□ 3.43
CHKA-206ENST00000531341 TEX14Q8IWB6 1497 aa36.4■■■■□ 3.42
CHKA-206ENST00000531341 WDR7Q9Y4E6 1490 aa36.37■■■■□ 3.41
CHKA-206ENST00000531341 ILDR1Q86SU0 546 aaPredicted RBP36.3■■■■□ 3.4
CHKA-206ENST00000531341 KCNH8Q96L42 1107 aa36.29■■■■□ 3.4
CHKA-206ENST00000531341 CTTNBP2Q8WZ74 1663 aa36.27■■■■□ 3.4
CHKA-206ENST00000531341 ABCA8O94911 1581 aa36.24■■■■□ 3.39
CHKA-206ENST00000531341 CD109Q6YHK3 1445 aa36.23■■■■□ 3.39
CHKA-206ENST00000531341 GOLGA3Q08378 1498 aa36.22■■■■□ 3.39
CHKA-206ENST00000531341 MAGI3Q5TCQ9 1506 aa36.18■■■■□ 3.38
CHKA-206ENST00000531341 PRXQ9BXM0 1461 aa36.18■■■■□ 3.38
CHKA-206ENST00000531341 CFAP43Q8NDM7 1665 aa36.13■■■■□ 3.37
CHKA-206ENST00000531341 HECW2Q9P2P5 1572 aa36.12■■■■□ 3.37
CHKA-206ENST00000531341 ARID3CA6NKF2 412 aa36.1■■■■□ 3.37
CHKA-206ENST00000531341 P3H3Q8IVL6 736 aa36.09■■■■□ 3.37
CHKA-206ENST00000531341 ATP10BO94823 1461 aa36■■■■□ 3.35
CHKA-206ENST00000531341 KIF21BO75037 1637 aa35.93■■■■□ 3.34
CHKA-206ENST00000531341 ARAP3Q8WWN8 1544 aa35.92■■■■□ 3.34
CHKA-206ENST00000531341 FAM9AQ8IZU1 332 aaPredicted RBP35.83■■■■□ 3.33
CHKA-206ENST00000531341 CSRNP3Q8WYN3 585 aa35.82■■■■□ 3.32
CHKA-206ENST00000531341 ABCA9Q8IUA7 1624 aa35.82■■■■□ 3.32
CHKA-206ENST00000531341 RAPGEF3O95398 923 aa35.81■■■■□ 3.32
CHKA-206ENST00000531341 SAMD9Q5K651 1589 aa35.8■■■■□ 3.32
CHKA-206ENST00000531341 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.74■■■■□ 3.31
CHKA-206ENST00000531341 HNRNPUL2Q1KMD3 747 aaKnown RBP35.74■■■■□ 3.31
CHKA-206ENST00000531341 RAPGEF6Q8TEU7 1601 aa35.74■■■■□ 3.31
CHKA-206ENST00000531341 PHLDB1Q86UU1 1377 aa35.74■■■■□ 3.31
CHKA-206ENST00000531341 RANGAP1P46060 587 aaPredicted RBP35.72■■■■□ 3.31
CHKA-206ENST00000531341 NUP153P49790 1475 aaKnown RBP35.67■■■■□ 3.3
CHKA-206ENST00000531341 NEO1Q92859 1461 aa35.67■■■■□ 3.3
CHKA-206ENST00000531341 PTPRMP28827 1452 aa35.67■■■■□ 3.3
CHKA-206ENST00000531341 ADAMTSL3P82987 1691 aa35.66■■■■□ 3.3
CHKA-206ENST00000531341 FRMPD1Q5SYB0 1578 aa35.64■■■■□ 3.3
CHKA-206ENST00000531341 FHOD3Q2V2M9 1422 aa35.63■■■■□ 3.29
CHKA-206ENST00000531341 ARID4BQ4LE39 1312 aaPredicted RBP35.56■■■■□ 3.28
CHKA-206ENST00000531341 BCORL1Q5H9F3 1711 aa35.52■■■■□ 3.28
CHKA-206ENST00000531341 PLEKHD1A6NEE1 506 aa35.51■■■■□ 3.28
CHKA-206ENST00000531341 MADDQ8WXG6 1647 aa35.49■■■■□ 3.27
CHKA-206ENST00000531341 AKNAQ7Z591 1439 aa35.46■■■■□ 3.27
CHKA-206ENST00000531341 DENND4BO75064 1496 aaPredicted RBP35.45■■■■□ 3.27
CHKA-206ENST00000531341 EEA1Q15075 1411 aa35.44■■■■□ 3.26
CHKA-206ENST00000531341 FBXO41Q8TF61 875 aa35.44■■■■□ 3.26
CHKA-206ENST00000531341 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.43■■■■□ 3.26
CHKA-206ENST00000531341 FANCAO15360 1455 aa35.41■■■■□ 3.26
CHKA-206ENST00000531341 RICTORQ6R327 1708 aa35.4■■■■□ 3.26
CHKA-206ENST00000531341 ARHGEF40Q8TER5 1519 aa35.4■■■■□ 3.26
CHKA-206ENST00000531341 LMTK3Q96Q04 1460 aa35.38■■■■□ 3.25
CHKA-206ENST00000531341 PCF11O94913 1555 aaKnown RBP35.37■■■■□ 3.25
CHKA-206ENST00000531341 TTC37Q6PGP7 1564 aa35.36■■■■□ 3.25
CHKA-206ENST00000531341 RIMS1Q86UR5 1692 aaKnown RBP35.33■■■■□ 3.25
CHKA-206ENST00000531341 YEATS2Q9ULM3 1422 aa35.32■■■■□ 3.25
CHKA-206ENST00000531341 CDK13Q14004 1512 aaKnown RBP35.31■■■■□ 3.24
CHKA-206ENST00000531341 SIGLEC1Q9BZZ2 1709 aa35.3■■■■□ 3.24
CHKA-206ENST00000531341 PLPPR3Q6T4P5 718 aa35.3■■■■□ 3.24
CHKA-206ENST00000531341 EFCAB5A4FU69 1503 aa35.29■■■■□ 3.24
CHKA-206ENST00000531341 CFAP74Q9C0B2 1584 aa35.27■■■■□ 3.24
CHKA-206ENST00000531341 HSPA2P54652 639 aa35.26■■■■□ 3.24
CHKA-206ENST00000531341 ZMYM4Q5VZL5 1548 aa35.26■■■■□ 3.23
CHKA-206ENST00000531341 ZFYVE16Q7Z3T8 1539 aa35.23■■■■□ 3.23
CHKA-206ENST00000531341 EHMT2Q96KQ7 1210 aa35.23■■■■□ 3.23
CHKA-206ENST00000531341 MLECQ14165 292 aa35.21■■■■□ 3.23
CHKA-206ENST00000531341 PLCH2O75038 1416 aa35.2■■■■□ 3.23
CHKA-206ENST00000531341 SCAPERQ9BY12 1400 aa35.2■■■■□ 3.23
CHKA-206ENST00000531341 HECW1Q76N89 1606 aa35.2■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms