RNA–Protein interactions for RNA: ENST00000531318.1

NFRKB-208, Transcript of nuclear factor related to kappaB binding protein, humanhuman

TSL 4

Gene NFRKB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKB-208ENST00000531318 SHROOM2Q13796 1616 aa13.28□□□□□ -0.28
NFRKB-208ENST00000531318 FHAD1B1AJZ9 1412 aa13.27□□□□□ -0.29
NFRKB-208ENST00000531318 ERICH3Q5RHP9 1530 aa13.23□□□□□ -0.29
NFRKB-208ENST00000531318 PRG4Q92954 1404 aaPredicted RBP13.22□□□□□ -0.29
NFRKB-208ENST00000531318 TSPOAP1O95153 1857 aa13.2□□□□□ -0.3
NFRKB-208ENST00000531318 JPH4Q96JJ6 628 aa13.18□□□□□ -0.3
NFRKB-208ENST00000531318 RUSC2Q8N2Y8 1516 aa13.16□□□□□ -0.3
NFRKB-208ENST00000531318 NPM1P06748 294 aaKnown RBP eCLIP13.15□□□□□ -0.3
NFRKB-208ENST00000531318 FAM69CQ0P6D2 419 aa13.15□□□□□ -0.3
NFRKB-208ENST00000531318 ADCY10Q96PN6 1610 aa13.12□□□□□ -0.31
NFRKB-208ENST00000531318 DIP2BQ9P265 1576 aa13.11□□□□□ -0.31
NFRKB-208ENST00000531318 TTBK1Q5TCY1 1321 aaPredicted RBP13.1□□□□□ -0.31
NFRKB-208ENST00000531318 ABCC10Q5T3U5 1492 aa13.1□□□□□ -0.31
NFRKB-208ENST00000531318 KDM6BO15054 1643 aa13.08□□□□□ -0.32
NFRKB-208ENST00000531318 MAPKBP1O60336 1514 aa13.08□□□□□ -0.32
NFRKB-208ENST00000531318 CUL7Q14999 1698 aa13.05□□□□□ -0.32
NFRKB-208ENST00000531318 PPP6R1Q9UPN7 881 aa13.04□□□□□ -0.32
NFRKB-208ENST00000531318 KIAA0586Q9BVV6 1533 aa13.03□□□□□ -0.32
NFRKB-208ENST00000531318 KIF27Q86VH2 1401 aa13.01□□□□□ -0.33
NFRKB-208ENST00000531318 IGF1RP08069 1367 aa13□□□□□ -0.33
NFRKB-208ENST00000531318 ADRA2BP18089 450 aa13□□□□□ -0.33
NFRKB-208ENST00000531318 KDM4FA0A1W2PPD8 638 aa12.98□□□□□ -0.33
NFRKB-208ENST00000531318 PTPRGP23470 1445 aa12.97□□□□□ -0.33
NFRKB-208ENST00000531318 CARMIL1Q5VZK9 1371 aa12.94□□□□□ -0.34
NFRKB-208ENST00000531318 PPRC1Q5VV67 1664 aaKnown RBP12.94□□□□□ -0.34
NFRKB-208ENST00000531318 CARMIL2Q6F5E8 1435 aa12.94□□□□□ -0.34
NFRKB-208ENST00000531318 IQGAP2Q13576 1575 aa12.94□□□□□ -0.34
NFRKB-208ENST00000531318 TNIKQ9UKE5 1360 aa12.93□□□□□ -0.34
NFRKB-208ENST00000531318 ABCC2Q92887 1545 aa12.93□□□□□ -0.34
NFRKB-208ENST00000531318 ASXL2Q76L83 1435 aa12.91□□□□□ -0.34
NFRKB-208ENST00000531318 PLB1Q6P1J6 1458 aa12.89□□□□□ -0.35
NFRKB-208ENST00000531318 GLI2P10070 1586 aa12.87□□□□□ -0.35
NFRKB-208ENST00000531318 ZCCHC11Q5TAX3 1644 aaKnown RBP12.87□□□□□ -0.35
NFRKB-208ENST00000531318 ADGRL1O94910 1474 aa12.86□□□□□ -0.35
NFRKB-208ENST00000531318 UACAQ9BZF9 1416 aa12.86□□□□□ -0.35
NFRKB-208ENST00000531318 DISP1Q96F81 1524 aa12.85□□□□□ -0.35
NFRKB-208ENST00000531318 PIAS4Q8N2W9 510 aaPredicted RBP12.85□□□□□ -0.35
NFRKB-208ENST00000531318 UHRF1BP1LA0JNW5 1464 aa12.85□□□□□ -0.35
NFRKB-208ENST00000531318 MAP3K4Q9Y6R4 1608 aa12.84□□□□□ -0.35
NFRKB-208ENST00000531318 EPRSP07814 1512 aaKnown RBP12.83□□□□□ -0.36
NFRKB-208ENST00000531318 KIAA0556O60303 1618 aa12.82□□□□□ -0.36
NFRKB-208ENST00000531318 ILDR1Q86SU0 546 aaPredicted RBP12.82□□□□□ -0.36
NFRKB-208ENST00000531318 CTTNBP2Q8WZ74 1663 aa12.81□□□□□ -0.36
NFRKB-208ENST00000531318 COL17A1Q9UMD9 1497 aaPredicted RBP12.81□□□□□ -0.36
NFRKB-208ENST00000531318 RAPGEF2Q9Y4G8 1499 aa12.8□□□□□ -0.36
NFRKB-208ENST00000531318 KDM5BQ9UGL1 1544 aa12.8□□□□□ -0.36
NFRKB-208ENST00000531318 TEX14Q8IWB6 1497 aa12.79□□□□□ -0.36
NFRKB-208ENST00000531318 UGGT2Q9NYU1 1516 aa12.79□□□□□ -0.36
NFRKB-208ENST00000531318 HECW2Q9P2P5 1572 aa12.77□□□□□ -0.37
NFRKB-208ENST00000531318 KCNH8Q96L42 1107 aa12.75□□□□□ -0.37
NFRKB-208ENST00000531318 WDR7Q9Y4E6 1490 aa12.75□□□□□ -0.37
NFRKB-208ENST00000531318 CFAP43Q8NDM7 1665 aa12.74□□□□□ -0.37
NFRKB-208ENST00000531318 KIF21BO75037 1637 aa12.72□□□□□ -0.37
NFRKB-208ENST00000531318 CD109Q6YHK3 1445 aa12.71□□□□□ -0.38
NFRKB-208ENST00000531318 ARID3CA6NKF2 412 aa12.7□□□□□ -0.38
NFRKB-208ENST00000531318 MSH5O43196 834 aa12.7□□□□□ -0.38
NFRKB-208ENST00000531318 GOLGA3Q08378 1498 aa12.69□□□□□ -0.38
NFRKB-208ENST00000531318 ABCA8O94911 1581 aa12.69□□□□□ -0.38
NFRKB-208ENST00000531318 P3H3Q8IVL6 736 aa12.66□□□□□ -0.38
NFRKB-208ENST00000531318 MAGI3Q5TCQ9 1506 aa12.66□□□□□ -0.38
NFRKB-208ENST00000531318 FAM9AQ8IZU1 332 aaPredicted RBP12.61□□□□□ -0.39
NFRKB-208ENST00000531318 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.58□□□□□ -0.4
NFRKB-208ENST00000531318 HNRNPUL2Q1KMD3 747 aaKnown RBP12.58□□□□□ -0.4
NFRKB-208ENST00000531318 ATP10BO94823 1461 aa12.58□□□□□ -0.4
NFRKB-208ENST00000531318 PRXQ9BXM0 1461 aa12.58□□□□□ -0.4
NFRKB-208ENST00000531318 RANGAP1P46060 587 aaPredicted RBP12.57□□□□□ -0.4
NFRKB-208ENST00000531318 ABCA9Q8IUA7 1624 aa12.57□□□□□ -0.4
NFRKB-208ENST00000531318 ARAP3Q8WWN8 1544 aa12.57□□□□□ -0.4
NFRKB-208ENST00000531318 RAPGEF6Q8TEU7 1601 aa12.56□□□□□ -0.4
NFRKB-208ENST00000531318 ADAMTSL3P82987 1691 aa12.55□□□□□ -0.4
NFRKB-208ENST00000531318 RAPGEF3O95398 923 aa12.55□□□□□ -0.4
NFRKB-208ENST00000531318 ARID4BQ4LE39 1312 aaPredicted RBP12.55□□□□□ -0.4
NFRKB-208ENST00000531318 BCORL1Q5H9F3 1711 aa12.54□□□□□ -0.4
NFRKB-208ENST00000531318 PTPRMP28827 1452 aa12.53□□□□□ -0.4
NFRKB-208ENST00000531318 MADDQ8WXG6 1647 aa12.53□□□□□ -0.4
NFRKB-208ENST00000531318 SAMD9Q5K651 1589 aa12.52□□□□□ -0.4
NFRKB-208ENST00000531318 RIMS1Q86UR5 1692 aaKnown RBP12.52□□□□□ -0.4
NFRKB-208ENST00000531318 FRMPD1Q5SYB0 1578 aa12.51□□□□□ -0.41
NFRKB-208ENST00000531318 NEO1Q92859 1461 aa12.49□□□□□ -0.41
NFRKB-208ENST00000531318 PHLDB1Q86UU1 1377 aa12.49□□□□□ -0.41
NFRKB-208ENST00000531318 FBXO41Q8TF61 875 aa12.49□□□□□ -0.41
NFRKB-208ENST00000531318 RICTORQ6R327 1708 aa12.48□□□□□ -0.41
NFRKB-208ENST00000531318 CSRNP3Q8WYN3 585 aa12.47□□□□□ -0.41
NFRKB-208ENST00000531318 PCF11O94913 1555 aaKnown RBP12.47□□□□□ -0.41
NFRKB-208ENST00000531318 FHOD3Q2V2M9 1422 aa12.46□□□□□ -0.41
NFRKB-208ENST00000531318 ARHGEF40Q8TER5 1519 aa12.46□□□□□ -0.42
NFRKB-208ENST00000531318 NUP153P49790 1475 aaKnown RBP12.46□□□□□ -0.42
NFRKB-208ENST00000531318 CFAP74Q9C0B2 1584 aa12.44□□□□□ -0.42
NFRKB-208ENST00000531318 DENND4BO75064 1496 aaPredicted RBP12.44□□□□□ -0.42
NFRKB-208ENST00000531318 PLEKHD1A6NEE1 506 aa12.43□□□□□ -0.42
NFRKB-208ENST00000531318 FER1L4A9Z1Z3 1794 aa12.43□□□□□ -0.42
NFRKB-208ENST00000531318 TTC37Q6PGP7 1564 aa12.43□□□□□ -0.42
NFRKB-208ENST00000531318 LMTK3Q96Q04 1460 aa12.42□□□□□ -0.42
NFRKB-208ENST00000531318 AKNAQ7Z591 1439 aa12.42□□□□□ -0.42
NFRKB-208ENST00000531318 SIGLEC1Q9BZZ2 1709 aa12.42□□□□□ -0.42
NFRKB-208ENST00000531318 FANCAO15360 1455 aa12.41□□□□□ -0.42
NFRKB-208ENST00000531318 HSPA2P54652 639 aa12.41□□□□□ -0.42
NFRKB-208ENST00000531318 MLECQ14165 292 aa12.41□□□□□ -0.42
NFRKB-208ENST00000531318 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.41□□□□□ -0.42
NFRKB-208ENST00000531318 EHMT2Q96KQ7 1210 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms