RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 JPH4Q96JJ6 628 aa31.66■■■□□ 2.66
GMDS-208ENST00000530927 PRG4Q92954 1404 aaPredicted RBP31.65■■■□□ 2.66
GMDS-208ENST00000530927 KIAA0586Q9BVV6 1533 aa31.64■■■□□ 2.65
GMDS-208ENST00000530927 RAPGEF2Q9Y4G8 1499 aa31.63■■■□□ 2.65
GMDS-208ENST00000530927 CHIC1Q5VXU3 224 aa31.62■■■□□ 2.65
GMDS-208ENST00000530927 PRXQ9BXM0 1461 aa31.52■■■□□ 2.64
GMDS-208ENST00000530927 IQGAP2Q13576 1575 aa31.49■■■□□ 2.63
GMDS-208ENST00000530927 FAM9AQ8IZU1 332 aaPredicted RBP31.48■■■□□ 2.63
GMDS-208ENST00000530927 CSRNP3Q8WYN3 585 aa31.44■■■□□ 2.62
GMDS-208ENST00000530927 CTTNBP2Q8WZ74 1663 aa31.37■■■□□ 2.61
GMDS-208ENST00000530927 EEA1Q15075 1411 aa31.36■■■□□ 2.61
GMDS-208ENST00000530927 TTBK1Q5TCY1 1321 aaPredicted RBP31.32■■■□□ 2.6
GMDS-208ENST00000530927 DISP1Q96F81 1524 aa31.31■■■□□ 2.6
GMDS-208ENST00000530927 UGGT2Q9NYU1 1516 aa31.29■■■□□ 2.6
GMDS-208ENST00000530927 CARMIL2Q6F5E8 1435 aa31.26■■■□□ 2.6
GMDS-208ENST00000530927 TRHP20396 242 aaPredicted RBP31.24■■■□□ 2.59
GMDS-208ENST00000530927 ADCY10Q96PN6 1610 aa31.23■■■□□ 2.59
GMDS-208ENST00000530927 PTPRGP23470 1445 aa31.21■■■□□ 2.59
GMDS-208ENST00000530927 KIAA0556O60303 1618 aa31.21■■■□□ 2.59
GMDS-208ENST00000530927 TNIKQ9UKE5 1360 aa31.21■■■□□ 2.59
GMDS-208ENST00000530927 EHMT2Q96KQ7 1210 aa31.17■■■□□ 2.58
GMDS-208ENST00000530927 KIF21BO75037 1637 aa31.15■■■□□ 2.58
GMDS-208ENST00000530927 RANGAP1P46060 587 aaPredicted RBP31.05■■■□□ 2.56
GMDS-208ENST00000530927 GOLGA3Q08378 1498 aa31.04■■■□□ 2.56
GMDS-208ENST00000530927 P3H3Q8IVL6 736 aa31.03■■■□□ 2.56
GMDS-208ENST00000530927 UACAQ9BZF9 1416 aa31.01■■■□□ 2.55
GMDS-208ENST00000530927 NPM1P06748 294 aaKnown RBP eCLIP30.99■■■□□ 2.55
GMDS-208ENST00000530927 SAMD9Q5K651 1589 aa30.96■■■□□ 2.55
GMDS-208ENST00000530927 ABCC2Q92887 1545 aa30.96■■■□□ 2.55
GMDS-208ENST00000530927 PLB1Q6P1J6 1458 aa30.96■■■□□ 2.55
GMDS-208ENST00000530927 MAPKBP1O60336 1514 aa30.95■■■□□ 2.54
GMDS-208ENST00000530927 UHRF1BP1LA0JNW5 1464 aa30.94■■■□□ 2.54
GMDS-208ENST00000530927 KIF13AQ9H1H9 1805 aa30.92■■■□□ 2.54
GMDS-208ENST00000530927 UBTFP17480 764 aaKnown RBP30.91■■■□□ 2.54
GMDS-208ENST00000530927 ABCA8O94911 1581 aa30.88■■■□□ 2.53
GMDS-208ENST00000530927 ABCC10Q5T3U5 1492 aa30.84■■■□□ 2.53
GMDS-208ENST00000530927 ZCCHC11Q5TAX3 1644 aaKnown RBP30.84■■■□□ 2.53
GMDS-208ENST00000530927 FHOD3Q2V2M9 1422 aa30.84■■■□□ 2.53
GMDS-208ENST00000530927 KDM5BQ9UGL1 1544 aa30.84■■■□□ 2.53
GMDS-208ENST00000530927 DIP2BQ9P265 1576 aa30.83■■■□□ 2.53
GMDS-208ENST00000530927 FAM69CQ0P6D2 419 aa30.81■■■□□ 2.52
GMDS-208ENST00000530927 ASXL2Q76L83 1435 aa30.81■■■□□ 2.52
GMDS-208ENST00000530927 ARID3CA6NKF2 412 aa30.76■■■□□ 2.51
GMDS-208ENST00000530927 EFCAB5A4FU69 1503 aa30.74■■■□□ 2.51
GMDS-208ENST00000530927 RAPGEF6Q8TEU7 1601 aa30.69■■■□□ 2.5
GMDS-208ENST00000530927 ARHGAP35Q9NRY4 1499 aa30.67■■■□□ 2.5
GMDS-208ENST00000530927 TSPOAP1O95153 1857 aa30.63■■■□□ 2.49
GMDS-208ENST00000530927 ATP10BO94823 1461 aa30.63■■■□□ 2.49
GMDS-208ENST00000530927 EPRSP07814 1512 aaKnown RBP30.62■■■□□ 2.49
GMDS-208ENST00000530927 WDR7Q9Y4E6 1490 aa30.6■■■□□ 2.49
GMDS-208ENST00000530927 NUP153P49790 1475 aaKnown RBP30.6■■■□□ 2.49
GMDS-208ENST00000530927 GLI2P10070 1586 aa30.57■■■□□ 2.48
GMDS-208ENST00000530927 KCNH8Q96L42 1107 aa30.53■■■□□ 2.48
GMDS-208ENST00000530927 PPRC1Q5VV67 1664 aaKnown RBP30.52■■■□□ 2.48
GMDS-208ENST00000530927 MAP3K4Q9Y6R4 1608 aa30.49■■■□□ 2.47
GMDS-208ENST00000530927 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.47■■■□□ 2.47
GMDS-208ENST00000530927 HNRNPUL2Q1KMD3 747 aaKnown RBP30.47■■■□□ 2.47
GMDS-208ENST00000530927 CDK13Q14004 1512 aaKnown RBP30.44■■■□□ 2.46
GMDS-208ENST00000530927 FMN1Q68DA7 1419 aa30.44■■■□□ 2.46
GMDS-208ENST00000530927 LOC105371045A0A1W2PR82 267 aa30.42■■■□□ 2.46
GMDS-208ENST00000530927 CLIP1P30622 1438 aa30.41■■■□□ 2.46
GMDS-208ENST00000530927 ATP1B4Q9UN42 357 aaPredicted RBP30.41■■■□□ 2.46
GMDS-208ENST00000530927 HECW1Q76N89 1606 aa30.36■■■□□ 2.45
GMDS-208ENST00000530927 KDM6BO15054 1643 aa30.35■■■□□ 2.45
GMDS-208ENST00000530927 LRRIQ1Q96JM4 1722 aa30.34■■■□□ 2.45
GMDS-208ENST00000530927 CFAP43Q8NDM7 1665 aa30.34■■■□□ 2.45
GMDS-208ENST00000530927 PCF11O94913 1555 aaKnown RBP30.33■■■□□ 2.45
GMDS-208ENST00000530927 CD109Q6YHK3 1445 aa30.33■■■□□ 2.45
GMDS-208ENST00000530927 CEP162Q5TB80 1403 aa30.29■■■□□ 2.44
GMDS-208ENST00000530927 ABCA9Q8IUA7 1624 aa30.28■■■□□ 2.44
GMDS-208ENST00000530927 PLEKHD1A6NEE1 506 aa30.27■■■□□ 2.44
GMDS-208ENST00000530927 COL17A1Q9UMD9 1497 aaPredicted RBP30.26■■■□□ 2.44
GMDS-208ENST00000530927 TEX14Q8IWB6 1497 aa30.26■■■□□ 2.43
GMDS-208ENST00000530927 MAGI3Q5TCQ9 1506 aa30.24■■■□□ 2.43
GMDS-208ENST00000530927 CASKIN1Q8WXD9 1431 aa30.24■■■□□ 2.43
GMDS-208ENST00000530927 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.18■■■□□ 2.42
GMDS-208ENST00000530927 TTC37Q6PGP7 1564 aa30.17■■■□□ 2.42
GMDS-208ENST00000530927 FYCO1Q9BQS8 1478 aa30.16■■■□□ 2.42
GMDS-208ENST00000530927 KIF14Q15058 1648 aa30.12■■■□□ 2.41
GMDS-208ENST00000530927 CCDC18Q5T9S5 1454 aa30.09■■■□□ 2.41
GMDS-208ENST00000530927 TROQ12816 1431 aaPredicted RBP30.07■■■□□ 2.4
GMDS-208ENST00000530927 CDK11AQ9UQ88 783 aaPredicted RBP30.05■■■□□ 2.4
GMDS-208ENST00000530927 NEO1Q92859 1461 aa29.99■■■□□ 2.39
GMDS-208ENST00000530927 ARAP3Q8WWN8 1544 aa29.98■■■□□ 2.39
GMDS-208ENST00000530927 FANCAO15360 1455 aa29.97■■■□□ 2.39
GMDS-208ENST00000530927 MYO5CQ9NQX4 1742 aa29.94■■■□□ 2.38
GMDS-208ENST00000530927 RAPGEF3O95398 923 aa29.94■■■□□ 2.38
GMDS-208ENST00000530927 PLCH2O75038 1416 aa29.93■■■□□ 2.38
GMDS-208ENST00000530927 AKNAQ7Z591 1439 aa29.92■■■□□ 2.38
GMDS-208ENST00000530927 FRMPD1Q5SYB0 1578 aa29.91■■■□□ 2.38
GMDS-208ENST00000530927 PHLDB1Q86UU1 1377 aa29.89■■■□□ 2.38
GMDS-208ENST00000530927 CFAP74Q9C0B2 1584 aa29.89■■■□□ 2.37
GMDS-208ENST00000530927 VPS8Q8N3P4 1428 aa29.88■■■□□ 2.37
GMDS-208ENST00000530927 CDC42BPBQ9Y5S2 1711 aa29.84■■■□□ 2.37
GMDS-208ENST00000530927 ARHGAP5Q13017 1502 aa29.83■■■□□ 2.37
GMDS-208ENST00000530927 RICTORQ6R327 1708 aa29.82■■■□□ 2.36
GMDS-208ENST00000530927 MTUS2Q5JR59 1369 aa29.81■■■□□ 2.36
GMDS-208ENST00000530927 PREX2Q70Z35 1606 aa29.81■■■□□ 2.36
GMDS-208ENST00000530927 DENND4BO75064 1496 aaPredicted RBP29.81■■■□□ 2.36
GMDS-208ENST00000530927 ADGRL1O94910 1474 aa29.81■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms