RNA–Protein interactions for RNA: ENST00000530548.5

PPFIA1-215, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 2

Gene PPFIA1, Length 3,774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-215ENST00000530548 KCNH8Q96L42 1107 aa11.24□□□□□ -0.61
PPFIA1-215ENST00000530548 AQRO60306 1485 aaKnown RBP eCLIP11.21□□□□□ -0.611e-6■■□□□ 13.9
PPFIA1-215ENST00000530548 HMGXB3Q12766 1538 aa11.19□□□□□ -0.62
PPFIA1-215ENST00000530548 PEG3Q9GZU2 1588 aa11.18□□□□□ -0.62
PPFIA1-215ENST00000530548 CDK11AQ9UQ88 783 aaPredicted RBP11.18□□□□□ -0.62
PPFIA1-215ENST00000530548 CCNB3Q8WWL7 1395 aa11.17□□□□□ -0.62
PPFIA1-215ENST00000530548 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.16□□□□□ -0.623e-7■■□□□ 13.1
PPFIA1-215ENST00000530548 ARAP1Q96P48 1450 aa11.16□□□□□ -0.62
PPFIA1-215ENST00000530548 PELP1Q8IZL8 1130 aaKnown RBP11.15□□□□□ -0.62
PPFIA1-215ENST00000530548 DDX10Q13206 875 aaKnown RBP11.15□□□□□ -0.62
PPFIA1-215ENST00000530548 MIER1Q8N108 512 aa11.15□□□□□ -0.62
PPFIA1-215ENST00000530548 TOP2BQ02880 1626 aa11.15□□□□□ -0.62
PPFIA1-215ENST00000530548 FOXD1Q16676 465 aa11.14□□□□□ -0.63
PPFIA1-215ENST00000530548 SENP3Q9H4L4 574 aaPredicted RBP11.14□□□□□ -0.63
PPFIA1-215ENST00000530548 KIF21BO75037 1637 aa11.14□□□□□ -0.63
PPFIA1-215ENST00000530548 POLA1P09884 1462 aaPredicted RBP11.13□□□□□ -0.63
PPFIA1-215ENST00000530548 TOPBP1Q92547 1522 aa11.12□□□□□ -0.63
PPFIA1-215ENST00000530548 GAPVD1Q14C86 1478 aa11.11□□□□□ -0.63
PPFIA1-215ENST00000530548 PRXQ9BXM0 1461 aa11.11□□□□□ -0.63
PPFIA1-215ENST00000530548 CFDP1Q9UEE9 299 aaPredicted RBP11.1□□□□□ -0.63
PPFIA1-215ENST00000530548 PLEKHD1A6NEE1 506 aa11.09□□□□□ -0.63
PPFIA1-215ENST00000530548 FHAD1B1AJZ9 1412 aa11.09□□□□□ -0.63
PPFIA1-215ENST00000530548 ARHGAP35Q9NRY4 1499 aa11.09□□□□□ -0.63
PPFIA1-215ENST00000530548 GTF3C3Q9Y5Q9 886 aa11.08□□□□□ -0.64
PPFIA1-215ENST00000530548 TONSLQ96HA7 1378 aa11.08□□□□□ -0.64
PPFIA1-215ENST00000530548 KDM2AQ9Y2K7 1162 aa11.08□□□□□ -0.64
PPFIA1-215ENST00000530548 JPH4Q96JJ6 628 aa11.07□□□□□ -0.64
PPFIA1-215ENST00000530548 SENP3-EIF4A1A0A087X0R7 540 aa11.07□□□□□ -0.64
PPFIA1-215ENST00000530548 RAB3GAP2Q9H2M9 1393 aa11.06□□□□□ -0.64
PPFIA1-215ENST00000530548 SLC4A1APQ9BWU0 796 aaKnown RBP11.06□□□□□ -0.64
PPFIA1-215ENST00000530548 PHLDB1Q86UU1 1377 aa11.04□□□□□ -0.64
PPFIA1-215ENST00000530548 TSPY4P0CV99 314 aa11.03□□□□□ -0.64
PPFIA1-215ENST00000530548 TSPY10P0CW01 314 aa11.03□□□□□ -0.64
PPFIA1-215ENST00000530548 ZNF644Q9H582 1327 aaPredicted RBP11.03□□□□□ -0.64
PPFIA1-215ENST00000530548 URB2Q14146 1524 aaKnown RBP11.03□□□□□ -0.64
PPFIA1-215ENST00000530548 BCANQ96GW7 911 aa11.02□□□□□ -0.65
PPFIA1-215ENST00000530548 RGL3Q3MIN7 710 aa11.02□□□□□ -0.65
PPFIA1-215ENST00000530548 PLPPR3Q6T4P5 718 aa11□□□□□ -0.65
PPFIA1-215ENST00000530548 FMN1Q68DA7 1419 aa11□□□□□ -0.65
PPFIA1-215ENST00000530548 ACIN1Q9UKV3 1341 aaKnown RBP10.99□□□□□ -0.65
PPFIA1-215ENST00000530548 ZNF608Q9ULD9 1512 aaPredicted RBP10.98□□□□□ -0.65
PPFIA1-215ENST00000530548 CHGAP10645 457 aaKnown RBP10.98□□□□□ -0.65
PPFIA1-215ENST00000530548 SETD5Q9C0A6 1442 aa10.97□□□□□ -0.65
PPFIA1-215ENST00000530548 DHX57Q6P158 1386 aaKnown RBP10.97□□□□□ -0.65
PPFIA1-215ENST00000530548 ANP32CO43423 234 aa10.97□□□□□ -0.65
PPFIA1-215ENST00000530548 HNRNPMP52272 730 aaKnown RBP eCLIP10.97□□□□□ -0.654e-11■■■■■ 33.2
PPFIA1-215ENST00000530548 NPM1P06748 294 aaKnown RBP eCLIP10.96□□□□□ -0.65
PPFIA1-215ENST00000530548 DNMBPQ6XZF7 1577 aa10.96□□□□□ -0.66
PPFIA1-215ENST00000530548 ERICH3Q5RHP9 1530 aa10.95□□□□□ -0.66
PPFIA1-215ENST00000530548 SCAF1Q9H7N4 1312 aaKnown RBP10.95□□□□□ -0.66
PPFIA1-215ENST00000530548 MYT1Q01538 1121 aa10.93□□□□□ -0.66
PPFIA1-215ENST00000530548 MRC2Q9UBG0 1479 aa10.92□□□□□ -0.66
PPFIA1-215ENST00000530548 ABCA10Q8WWZ4 1543 aa10.92□□□□□ -0.66
PPFIA1-215ENST00000530548 BIVM-ERCC5R4GMW8 1640 aa10.92□□□□□ -0.66
PPFIA1-215ENST00000530548 LRRC9Q6ZRR7 1453 aa10.92□□□□□ -0.66
PPFIA1-215ENST00000530548 NEFLP07196 543 aa10.9□□□□□ -0.66
PPFIA1-215ENST00000530548 SNAPC4Q5SXM2 1469 aa10.9□□□□□ -0.66
PPFIA1-215ENST00000530548 GRIN2BQ13224 1484 aa10.9□□□□□ -0.67
PPFIA1-215ENST00000530548 SALL2Q9Y467 1007 aaPredicted RBP10.89□□□□□ -0.67
PPFIA1-215ENST00000530548 CARMIL2Q6F5E8 1435 aa10.89□□□□□ -0.67
PPFIA1-215ENST00000530548 LAMC3Q9Y6N6 1575 aa10.89□□□□□ -0.67
PPFIA1-215ENST00000530548 FAM9BQ8IZU0 186 aa10.89□□□□□ -0.67
PPFIA1-215ENST00000530548 MPHOSPH9Q99550 1183 aa10.89□□□□□ -0.67
PPFIA1-215ENST00000530548 PKD2Q13563 968 aa10.88□□□□□ -0.67
PPFIA1-215ENST00000530548 PTPRGP23470 1445 aa10.85□□□□□ -0.67
PPFIA1-215ENST00000530548 FGD6Q6ZV73 1430 aa10.84□□□□□ -0.67
PPFIA1-215ENST00000530548 CASKIN1Q8WXD9 1431 aa10.84□□□□□ -0.67
PPFIA1-215ENST00000530548 PRDM2Q13029 1718 aa10.84□□□□□ -0.67
PPFIA1-215ENST00000530548 EIF4G2P78344 907 aaKnown RBP eCLIP10.84□□□□□ -0.67
PPFIA1-215ENST00000530548 CDK13Q14004 1512 aaKnown RBP10.84□□□□□ -0.67
PPFIA1-215ENST00000530548 L3MBTL2Q969R5 705 aa10.84□□□□□ -0.67
PPFIA1-215ENST00000530548 HNRNPUQ00839 825 aaKnown RBP eCLIP10.83□□□□□ -0.68
PPFIA1-215ENST00000530548 PRG4Q92954 1404 aaPredicted RBP10.83□□□□□ -0.68
PPFIA1-215ENST00000530548 NCOA2Q15596 1464 aa10.83□□□□□ -0.68
PPFIA1-215ENST00000530548 DCAF11Q8TEB1 546 aa10.83□□□□□ -0.68
PPFIA1-215ENST00000530548 PPP1R15AO75807 674 aaPredicted RBP10.82□□□□□ -0.68
PPFIA1-215ENST00000530548 PCF11O94913 1555 aaKnown RBP10.82□□□□□ -0.68
PPFIA1-215ENST00000530548 IRX6P78412 446 aaPredicted RBP10.81□□□□□ -0.68
PPFIA1-215ENST00000530548 IFT140Q96RY7 1462 aa10.81□□□□□ -0.68
PPFIA1-215ENST00000530548 CYB5RLQ6IPT4 315 aa10.81□□□□□ -0.68
PPFIA1-215ENST00000530548 CLSPNQ9HAW4 1339 aa10.81□□□□□ -0.68
PPFIA1-215ENST00000530548 NUP155O75694 1391 aa10.8□□□□□ -0.68
PPFIA1-215ENST00000530548 RRBP1Q9P2E9 1410 aaKnown RBP10.8□□□□□ -0.68
PPFIA1-215ENST00000530548 KIF21AQ7Z4S6 1674 aa10.8□□□□□ -0.68
PPFIA1-215ENST00000530548 HSPA5P11021 654 aaKnown RBP10.8□□□□□ -0.68
PPFIA1-215ENST00000530548 TIAM1Q13009 1591 aa10.8□□□□□ -0.68
PPFIA1-215ENST00000530548 PLB1Q6P1J6 1458 aa10.79□□□□□ -0.68
PPFIA1-215ENST00000530548 MYOM3Q5VTT5 1437 aa10.79□□□□□ -0.68
PPFIA1-215ENST00000530548 CCDC18Q5T9S5 1454 aa10.78□□□□□ -0.68
PPFIA1-215ENST00000530548 GGT6Q6P531 493 aa10.78□□□□□ -0.68
PPFIA1-215ENST00000530548 CARD11Q9BXL7 1154 aa10.78□□□□□ -0.68
PPFIA1-215ENST00000530548 MLECQ14165 292 aa10.77□□□□□ -0.68
PPFIA1-215ENST00000530548 MRS2Q9HD23 443 aa10.77□□□□□ -0.69
PPFIA1-215ENST00000530548 FYCO1Q9BQS8 1478 aa10.76□□□□□ -0.69
PPFIA1-215ENST00000530548 FKBP8Q14318 412 aa10.75□□□□□ -0.69
PPFIA1-215ENST00000530548 AFAP1Q8N556 730 aa10.75□□□□□ -0.69
PPFIA1-215ENST00000530548 NUTM2DQ5VT03 806 aaPredicted RBP10.74□□□□□ -0.69
PPFIA1-215ENST00000530548 STAG3Q9UJ98 1225 aa10.74□□□□□ -0.69
PPFIA1-215ENST00000530548 EFCAB2Q5VUJ9 269 aa10.73□□□□□ -0.69
PPFIA1-215ENST00000530548 KIF3BO15066 747 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms