RNA–Protein interactions for RNA: ENST00000530322.5

SF3B2-209, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-209ENST00000530322 KIAA0586Q9BVV6 1533 aa28.51■■■□□ 2.15
SF3B2-209ENST00000530322 JPH4Q96JJ6 628 aa28.49■■■□□ 2.15
SF3B2-209ENST00000530322 RAPGEF2Q9Y4G8 1499 aa28.48■■■□□ 2.15
SF3B2-209ENST00000530322 PRG4Q92954 1404 aaPredicted RBP28.45■■■□□ 2.15
SF3B2-209ENST00000530322 CHIC1Q5VXU3 224 aa28.41■■■□□ 2.14
SF3B2-209ENST00000530322 PRXQ9BXM0 1461 aa28.37■■■□□ 2.13
SF3B2-209ENST00000530322 IQGAP2Q13576 1575 aa28.34■■■□□ 2.13
SF3B2-209ENST00000530322 EEA1Q15075 1411 aa28.32■■■□□ 2.12
SF3B2-209ENST00000530322 CSRNP3Q8WYN3 585 aa28.3■■■□□ 2.12
SF3B2-209ENST00000530322 CTTNBP2Q8WZ74 1663 aa28.25■■■□□ 2.11
SF3B2-209ENST00000530322 UGGT2Q9NYU1 1516 aa28.19■■■□□ 2.1
SF3B2-209ENST00000530322 CARMIL2Q6F5E8 1435 aa28.18■■■□□ 2.1
SF3B2-209ENST00000530322 FAM9AQ8IZU1 332 aaPredicted RBP28.16■■■□□ 2.1
SF3B2-209ENST00000530322 DISP1Q96F81 1524 aa28.16■■■□□ 2.1
SF3B2-209ENST00000530322 TNIKQ9UKE5 1360 aa28.11■■■□□ 2.09
SF3B2-209ENST00000530322 PTPRGP23470 1445 aa28.09■■■□□ 2.09
SF3B2-209ENST00000530322 KIAA0556O60303 1618 aa28.08■■■□□ 2.09
SF3B2-209ENST00000530322 KIF21BO75037 1637 aa28.07■■■□□ 2.08
SF3B2-209ENST00000530322 ADCY10Q96PN6 1610 aa28.07■■■□□ 2.08
SF3B2-209ENST00000530322 TRHP20396 242 aaPredicted RBP28.04■■■□□ 2.08
SF3B2-209ENST00000530322 TTBK1Q5TCY1 1321 aaPredicted RBP28■■■□□ 2.07
SF3B2-209ENST00000530322 GOLGA3Q08378 1498 aa28■■■□□ 2.07
SF3B2-209ENST00000530322 UHRF1BP1LA0JNW5 1464 aa27.91■■■□□ 2.06
SF3B2-209ENST00000530322 NPM1P06748 294 aaKnown RBP eCLIP27.91■■■□□ 2.06
SF3B2-209ENST00000530322 UACAQ9BZF9 1416 aa27.91■■■□□ 2.06
SF3B2-209ENST00000530322 MAPKBP1O60336 1514 aa27.89■■■□□ 2.06
SF3B2-209ENST00000530322 ABCC2Q92887 1545 aa27.87■■■□□ 2.05
SF3B2-209ENST00000530322 SAMD9Q5K651 1589 aa27.87■■■□□ 2.05
SF3B2-209ENST00000530322 KIF13AQ9H1H9 1805 aa27.82■■■□□ 2.04
SF3B2-209ENST00000530322 P3H3Q8IVL6 736 aa27.8■■■□□ 2.04
SF3B2-209ENST00000530322 EHMT2Q96KQ7 1210 aa27.8■■■□□ 2.04
SF3B2-209ENST00000530322 PLB1Q6P1J6 1458 aa27.8■■■□□ 2.04
SF3B2-209ENST00000530322 ABCA8O94911 1581 aa27.78■■■□□ 2.04
SF3B2-209ENST00000530322 KDM5BQ9UGL1 1544 aa27.77■■■□□ 2.04
SF3B2-209ENST00000530322 UBTFP17480 764 aaKnown RBP27.77■■■□□ 2.04
SF3B2-209ENST00000530322 ABCC10Q5T3U5 1492 aa27.76■■■□□ 2.04
SF3B2-209ENST00000530322 RANGAP1P46060 587 aaPredicted RBP27.75■■■□□ 2.03
SF3B2-209ENST00000530322 ZCCHC11Q5TAX3 1644 aaKnown RBP27.73■■■□□ 2.03
SF3B2-209ENST00000530322 DIP2BQ9P265 1576 aa27.73■■■□□ 2.03
SF3B2-209ENST00000530322 EFCAB5A4FU69 1503 aa27.72■■■□□ 2.03
SF3B2-209ENST00000530322 ASXL2Q76L83 1435 aa27.7■■■□□ 2.03
SF3B2-209ENST00000530322 FAM69CQ0P6D2 419 aa27.68■■■□□ 2.02
SF3B2-209ENST00000530322 FHOD3Q2V2M9 1422 aa27.67■■■□□ 2.02
SF3B2-209ENST00000530322 RAPGEF6Q8TEU7 1601 aa27.62■■■□□ 2.01
SF3B2-209ENST00000530322 ARHGAP35Q9NRY4 1499 aa27.57■■■□□ 2
SF3B2-209ENST00000530322 GLI2P10070 1586 aa27.56■■■□□ 2
SF3B2-209ENST00000530322 ATP10BO94823 1461 aa27.54■■■□□ 2
SF3B2-209ENST00000530322 EPRSP07814 1512 aaKnown RBP27.54■■■□□ 2
SF3B2-209ENST00000530322 WDR7Q9Y4E6 1490 aa27.54■■■□□ 2
SF3B2-209ENST00000530322 NUP153P49790 1475 aaKnown RBP27.51■■■□□ 2
SF3B2-209ENST00000530322 TSPOAP1O95153 1857 aa27.51■■□□□ 1.99
SF3B2-209ENST00000530322 ARID3CA6NKF2 412 aa27.5■■□□□ 1.99
SF3B2-209ENST00000530322 MAP3K4Q9Y6R4 1608 aa27.45■■□□□ 1.98
SF3B2-209ENST00000530322 FMN1Q68DA7 1419 aa27.44■■□□□ 1.98
SF3B2-209ENST00000530322 PPRC1Q5VV67 1664 aaKnown RBP27.43■■□□□ 1.98
SF3B2-209ENST00000530322 KCNH8Q96L42 1107 aa27.38■■□□□ 1.97
SF3B2-209ENST00000530322 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.36■■□□□ 1.97
SF3B2-209ENST00000530322 HNRNPUL2Q1KMD3 747 aaKnown RBP27.36■■□□□ 1.97
SF3B2-209ENST00000530322 CLIP1P30622 1438 aa27.35■■□□□ 1.97
SF3B2-209ENST00000530322 CFAP43Q8NDM7 1665 aa27.35■■□□□ 1.97
SF3B2-209ENST00000530322 HECW1Q76N89 1606 aa27.34■■□□□ 1.97
SF3B2-209ENST00000530322 CDK13Q14004 1512 aaKnown RBP27.31■■□□□ 1.96
SF3B2-209ENST00000530322 KDM6BO15054 1643 aa27.3■■□□□ 1.96
SF3B2-209ENST00000530322 CD109Q6YHK3 1445 aa27.29■■□□□ 1.96
SF3B2-209ENST00000530322 TEX14Q8IWB6 1497 aa27.28■■□□□ 1.96
SF3B2-209ENST00000530322 ABCA9Q8IUA7 1624 aa27.27■■□□□ 1.96
SF3B2-209ENST00000530322 PLEKHD1A6NEE1 506 aa27.26■■□□□ 1.95
SF3B2-209ENST00000530322 ATP1B4Q9UN42 357 aaPredicted RBP27.26■■□□□ 1.95
SF3B2-209ENST00000530322 MAGI3Q5TCQ9 1506 aa27.26■■□□□ 1.95
SF3B2-209ENST00000530322 PCF11O94913 1555 aaKnown RBP27.25■■□□□ 1.95
SF3B2-209ENST00000530322 LRRIQ1Q96JM4 1722 aa27.24■■□□□ 1.95
SF3B2-209ENST00000530322 LOC105371045A0A1W2PR82 267 aa27.24■■□□□ 1.95
SF3B2-209ENST00000530322 CASKIN1Q8WXD9 1431 aa27.24■■□□□ 1.95
SF3B2-209ENST00000530322 CEP162Q5TB80 1403 aa27.22■■□□□ 1.95
SF3B2-209ENST00000530322 FYCO1Q9BQS8 1478 aa27.17■■□□□ 1.94
SF3B2-209ENST00000530322 COL17A1Q9UMD9 1497 aaPredicted RBP27.16■■□□□ 1.94
SF3B2-209ENST00000530322 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.14■■□□□ 1.94
SF3B2-209ENST00000530322 CCDC18Q5T9S5 1454 aa27.13■■□□□ 1.93
SF3B2-209ENST00000530322 CDK11AQ9UQ88 783 aaPredicted RBP27.12■■□□□ 1.93
SF3B2-209ENST00000530322 TTC37Q6PGP7 1564 aa27.1■■□□□ 1.93
SF3B2-209ENST00000530322 TROQ12816 1431 aaPredicted RBP27.07■■□□□ 1.92
SF3B2-209ENST00000530322 NEO1Q92859 1461 aa27.04■■□□□ 1.92
SF3B2-209ENST00000530322 ARAP3Q8WWN8 1544 aa27.04■■□□□ 1.92
SF3B2-209ENST00000530322 KIF14Q15058 1648 aa27.04■■□□□ 1.92
SF3B2-209ENST00000530322 PHLDB1Q86UU1 1377 aa27.03■■□□□ 1.92
SF3B2-209ENST00000530322 FANCAO15360 1455 aa26.97■■□□□ 1.91
SF3B2-209ENST00000530322 CFAP74Q9C0B2 1584 aa26.97■■□□□ 1.91
SF3B2-209ENST00000530322 MYO5CQ9NQX4 1742 aa26.96■■□□□ 1.91
SF3B2-209ENST00000530322 PLCH2O75038 1416 aa26.96■■□□□ 1.91
SF3B2-209ENST00000530322 AKNAQ7Z591 1439 aa26.91■■□□□ 1.9
SF3B2-209ENST00000530322 VPS8Q8N3P4 1428 aa26.9■■□□□ 1.9
SF3B2-209ENST00000530322 FRMPD1Q5SYB0 1578 aa26.87■■□□□ 1.89
SF3B2-209ENST00000530322 RAPGEF3O95398 923 aa26.86■■□□□ 1.89
SF3B2-209ENST00000530322 CDC42BPBQ9Y5S2 1711 aa26.85■■□□□ 1.89
SF3B2-209ENST00000530322 DENND4BO75064 1496 aaPredicted RBP26.84■■□□□ 1.89
SF3B2-209ENST00000530322 RICTORQ6R327 1708 aa26.84■■□□□ 1.89
SF3B2-209ENST00000530322 PREX2Q70Z35 1606 aa26.83■■□□□ 1.89
SF3B2-209ENST00000530322 EFCAB2Q5VUJ9 269 aa26.83■■□□□ 1.89
SF3B2-209ENST00000530322 MTUS2Q5JR59 1369 aa26.83■■□□□ 1.88
SF3B2-209ENST00000530322 ARHGAP5Q13017 1502 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms