RNA–Protein interactions for RNA: ENST00000529854.1

GSDMD-209, Transcript of gasdermin D, humanhuman

TSL 4

Gene GSDMD, Length 511 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-209ENST00000529854 JPH4Q96JJ6 628 aa28.72■■■□□ 2.19
GSDMD-209ENST00000529854 KIAA0586Q9BVV6 1533 aa28.71■■■□□ 2.19
GSDMD-209ENST00000529854 RAPGEF2Q9Y4G8 1499 aa28.71■■■□□ 2.19
GSDMD-209ENST00000529854 CHIC1Q5VXU3 224 aa28.7■■■□□ 2.18
GSDMD-209ENST00000529854 PRG4Q92954 1404 aaPredicted RBP28.69■■■□□ 2.18
GSDMD-209ENST00000529854 PRXQ9BXM0 1461 aa28.6■■■□□ 2.17
GSDMD-209ENST00000529854 IQGAP2Q13576 1575 aa28.56■■■□□ 2.16
GSDMD-209ENST00000529854 CSRNP3Q8WYN3 585 aa28.55■■■□□ 2.16
GSDMD-209ENST00000529854 FAM9AQ8IZU1 332 aaPredicted RBP28.54■■■□□ 2.16
GSDMD-209ENST00000529854 EEA1Q15075 1411 aa28.52■■■□□ 2.16
GSDMD-209ENST00000529854 CTTNBP2Q8WZ74 1663 aa28.45■■■□□ 2.15
GSDMD-209ENST00000529854 UGGT2Q9NYU1 1516 aa28.39■■■□□ 2.14
GSDMD-209ENST00000529854 CARMIL2Q6F5E8 1435 aa28.39■■■□□ 2.14
GSDMD-209ENST00000529854 DISP1Q96F81 1524 aa28.38■■■□□ 2.13
GSDMD-209ENST00000529854 TTBK1Q5TCY1 1321 aaPredicted RBP28.38■■■□□ 2.13
GSDMD-209ENST00000529854 TNIKQ9UKE5 1360 aa28.33■■■□□ 2.13
GSDMD-209ENST00000529854 TRHP20396 242 aaPredicted RBP28.32■■■□□ 2.12
GSDMD-209ENST00000529854 PTPRGP23470 1445 aa28.32■■■□□ 2.12
GSDMD-209ENST00000529854 KIAA0556O60303 1618 aa28.31■■■□□ 2.12
GSDMD-209ENST00000529854 ADCY10Q96PN6 1610 aa28.29■■■□□ 2.12
GSDMD-209ENST00000529854 KIF21BO75037 1637 aa28.28■■■□□ 2.12
GSDMD-209ENST00000529854 EHMT2Q96KQ7 1210 aa28.23■■■□□ 2.11
GSDMD-209ENST00000529854 GOLGA3Q08378 1498 aa28.21■■■□□ 2.11
GSDMD-209ENST00000529854 NPM1P06748 294 aaKnown RBP eCLIP28.15■■■□□ 2.1
GSDMD-209ENST00000529854 UACAQ9BZF9 1416 aa28.13■■■□□ 2.09
GSDMD-209ENST00000529854 RANGAP1P46060 587 aaPredicted RBP28.13■■■□□ 2.09
GSDMD-209ENST00000529854 P3H3Q8IVL6 736 aa28.12■■■□□ 2.09
GSDMD-209ENST00000529854 ABCC2Q92887 1545 aa28.09■■■□□ 2.09
GSDMD-209ENST00000529854 UHRF1BP1LA0JNW5 1464 aa28.08■■■□□ 2.09
GSDMD-209ENST00000529854 SAMD9Q5K651 1589 aa28.08■■■□□ 2.09
GSDMD-209ENST00000529854 MAPKBP1O60336 1514 aa28.07■■■□□ 2.08
GSDMD-209ENST00000529854 UBTFP17480 764 aaKnown RBP28.06■■■□□ 2.08
GSDMD-209ENST00000529854 PLB1Q6P1J6 1458 aa28.06■■■□□ 2.08
GSDMD-209ENST00000529854 KIF13AQ9H1H9 1805 aa27.99■■■□□ 2.07
GSDMD-209ENST00000529854 ABCA8O94911 1581 aa27.99■■■□□ 2.07
GSDMD-209ENST00000529854 FHOD3Q2V2M9 1422 aa27.97■■■□□ 2.07
GSDMD-209ENST00000529854 KDM5BQ9UGL1 1544 aa27.97■■■□□ 2.07
GSDMD-209ENST00000529854 ABCC10Q5T3U5 1492 aa27.96■■■□□ 2.07
GSDMD-209ENST00000529854 ZCCHC11Q5TAX3 1644 aaKnown RBP27.95■■■□□ 2.06
GSDMD-209ENST00000529854 DIP2BQ9P265 1576 aa27.94■■■□□ 2.06
GSDMD-209ENST00000529854 ASXL2Q76L83 1435 aa27.93■■■□□ 2.06
GSDMD-209ENST00000529854 FAM69CQ0P6D2 419 aa27.93■■■□□ 2.06
GSDMD-209ENST00000529854 EFCAB5A4FU69 1503 aa27.92■■■□□ 2.06
GSDMD-209ENST00000529854 ARID3CA6NKF2 412 aa27.86■■■□□ 2.05
GSDMD-209ENST00000529854 RAPGEF6Q8TEU7 1601 aa27.84■■■□□ 2.05
GSDMD-209ENST00000529854 ARHGAP35Q9NRY4 1499 aa27.83■■■□□ 2.04
GSDMD-209ENST00000529854 ATP10BO94823 1461 aa27.76■■■□□ 2.04
GSDMD-209ENST00000529854 WDR7Q9Y4E6 1490 aa27.76■■■□□ 2.04
GSDMD-209ENST00000529854 EPRSP07814 1512 aaKnown RBP27.76■■■□□ 2.03
GSDMD-209ENST00000529854 NUP153P49790 1475 aaKnown RBP27.75■■■□□ 2.03
GSDMD-209ENST00000529854 TSPOAP1O95153 1857 aa27.74■■■□□ 2.03
GSDMD-209ENST00000529854 GLI2P10070 1586 aa27.73■■■□□ 2.03
GSDMD-209ENST00000529854 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.67■■■□□ 2.02
GSDMD-209ENST00000529854 HNRNPUL2Q1KMD3 747 aaKnown RBP27.67■■■□□ 2.02
GSDMD-209ENST00000529854 KCNH8Q96L42 1107 aa27.67■■■□□ 2.02
GSDMD-209ENST00000529854 FMN1Q68DA7 1419 aa27.66■■■□□ 2.02
GSDMD-209ENST00000529854 MAP3K4Q9Y6R4 1608 aa27.63■■■□□ 2.01
GSDMD-209ENST00000529854 PPRC1Q5VV67 1664 aaKnown RBP27.62■■■□□ 2.01
GSDMD-209ENST00000529854 CLIP1P30622 1438 aa27.62■■■□□ 2.01
GSDMD-209ENST00000529854 ATP1B4Q9UN42 357 aaPredicted RBP27.59■■■□□ 2.01
GSDMD-209ENST00000529854 CDK13Q14004 1512 aaKnown RBP27.58■■■□□ 2.01
GSDMD-209ENST00000529854 HECW1Q76N89 1606 aa27.56■■■□□ 2
GSDMD-209ENST00000529854 LOC105371045A0A1W2PR82 267 aa27.56■■■□□ 2
GSDMD-209ENST00000529854 CFAP43Q8NDM7 1665 aa27.52■■■□□ 2
GSDMD-209ENST00000529854 CD109Q6YHK3 1445 aa27.51■■□□□ 1.99
GSDMD-209ENST00000529854 KDM6BO15054 1643 aa27.51■■□□□ 1.99
GSDMD-209ENST00000529854 PCF11O94913 1555 aaKnown RBP27.51■■□□□ 1.99
GSDMD-209ENST00000529854 CEP162Q5TB80 1403 aa27.5■■□□□ 1.99
GSDMD-209ENST00000529854 PLEKHD1A6NEE1 506 aa27.49■■□□□ 1.99
GSDMD-209ENST00000529854 TEX14Q8IWB6 1497 aa27.47■■□□□ 1.99
GSDMD-209ENST00000529854 LRRIQ1Q96JM4 1722 aa27.46■■□□□ 1.99
GSDMD-209ENST00000529854 ABCA9Q8IUA7 1624 aa27.45■■□□□ 1.99
GSDMD-209ENST00000529854 CASKIN1Q8WXD9 1431 aa27.45■■□□□ 1.98
GSDMD-209ENST00000529854 MAGI3Q5TCQ9 1506 aa27.44■■□□□ 1.98
GSDMD-209ENST00000529854 COL17A1Q9UMD9 1497 aaPredicted RBP27.39■■□□□ 1.98
GSDMD-209ENST00000529854 FYCO1Q9BQS8 1478 aa27.38■■□□□ 1.97
GSDMD-209ENST00000529854 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.36■■□□□ 1.97
GSDMD-209ENST00000529854 TTC37Q6PGP7 1564 aa27.34■■□□□ 1.97
GSDMD-209ENST00000529854 CCDC18Q5T9S5 1454 aa27.33■■□□□ 1.97
GSDMD-209ENST00000529854 CDK11AQ9UQ88 783 aaPredicted RBP27.33■■□□□ 1.97
GSDMD-209ENST00000529854 TROQ12816 1431 aaPredicted RBP27.3■■□□□ 1.96
GSDMD-209ENST00000529854 KIF14Q15058 1648 aa27.29■■□□□ 1.96
GSDMD-209ENST00000529854 NEO1Q92859 1461 aa27.22■■□□□ 1.95
GSDMD-209ENST00000529854 ARAP3Q8WWN8 1544 aa27.2■■□□□ 1.94
GSDMD-209ENST00000529854 FANCAO15360 1455 aa27.19■■□□□ 1.94
GSDMD-209ENST00000529854 PHLDB1Q86UU1 1377 aa27.17■■□□□ 1.94
GSDMD-209ENST00000529854 PLCH2O75038 1416 aa27.16■■□□□ 1.94
GSDMD-209ENST00000529854 MYO5CQ9NQX4 1742 aa27.16■■□□□ 1.94
GSDMD-209ENST00000529854 VPS8Q8N3P4 1428 aa27.15■■□□□ 1.94
GSDMD-209ENST00000529854 AKNAQ7Z591 1439 aa27.14■■□□□ 1.93
GSDMD-209ENST00000529854 CFAP74Q9C0B2 1584 aa27.14■■□□□ 1.93
GSDMD-209ENST00000529854 RAPGEF3O95398 923 aa27.12■■□□□ 1.93
GSDMD-209ENST00000529854 FRMPD1Q5SYB0 1578 aa27.09■■□□□ 1.93
GSDMD-209ENST00000529854 MTUS2Q5JR59 1369 aa27.08■■□□□ 1.93
GSDMD-209ENST00000529854 ARHGAP5Q13017 1502 aa27.07■■□□□ 1.92
GSDMD-209ENST00000529854 DENND4BO75064 1496 aaPredicted RBP27.06■■□□□ 1.92
GSDMD-209ENST00000529854 EFCAB2Q5VUJ9 269 aa27.05■■□□□ 1.92
GSDMD-209ENST00000529854 ADGRL1O94910 1474 aa27.05■■□□□ 1.92
GSDMD-209ENST00000529854 PREX2Q70Z35 1606 aa27.04■■□□□ 1.92
GSDMD-209ENST00000529854 CDC42BPBQ9Y5S2 1711 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms