RNA–Protein interactions for RNA: ENST00000528910.5

USP35-202, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-202ENST00000528910 CYB5RLQ6IPT4 315 aa29.51■■■□□ 2.31
USP35-202ENST00000528910 RAPGEF2Q9Y4G8 1499 aa29.47■■■□□ 2.31
USP35-202ENST00000528910 PRG4Q92954 1404 aaPredicted RBP29.43■■■□□ 2.3
USP35-202ENST00000528910 IQGAP2Q13576 1575 aa29.4■■■□□ 2.3
USP35-202ENST00000528910 JPH4Q96JJ6 628 aa29.39■■■□□ 2.3
USP35-202ENST00000528910 PRXQ9BXM0 1461 aa29.37■■■□□ 2.29
USP35-202ENST00000528910 CTTNBP2Q8WZ74 1663 aa29.36■■■□□ 2.29
USP35-202ENST00000528910 EEA1Q15075 1411 aa29.32■■■□□ 2.28
USP35-202ENST00000528910 UGGT2Q9NYU1 1516 aa29.24■■■□□ 2.27
USP35-202ENST00000528910 CHIC1Q5VXU3 224 aa29.22■■■□□ 2.27
USP35-202ENST00000528910 DISP1Q96F81 1524 aa29.17■■■□□ 2.26
USP35-202ENST00000528910 CARMIL2Q6F5E8 1435 aa29.16■■■□□ 2.26
USP35-202ENST00000528910 CSRNP3Q8WYN3 585 aa29.15■■■□□ 2.26
USP35-202ENST00000528910 KIAA0556O60303 1618 aa29.14■■■□□ 2.26
USP35-202ENST00000528910 ADCY10Q96PN6 1610 aa29.12■■■□□ 2.25
USP35-202ENST00000528910 KIF21BO75037 1637 aa29.12■■■□□ 2.25
USP35-202ENST00000528910 TNIKQ9UKE5 1360 aa29.08■■■□□ 2.25
USP35-202ENST00000528910 PTPRGP23470 1445 aa29.03■■■□□ 2.24
USP35-202ENST00000528910 GOLGA3Q08378 1498 aa29.01■■■□□ 2.23
USP35-202ENST00000528910 TRHP20396 242 aaPredicted RBP28.99■■■□□ 2.23
USP35-202ENST00000528910 MAPKBP1O60336 1514 aa28.98■■■□□ 2.23
USP35-202ENST00000528910 SAMD9Q5K651 1589 aa28.94■■■□□ 2.22
USP35-202ENST00000528910 UHRF1BP1LA0JNW5 1464 aa28.94■■■□□ 2.22
USP35-202ENST00000528910 FAM9AQ8IZU1 332 aaPredicted RBP28.93■■■□□ 2.22
USP35-202ENST00000528910 ABCC2Q92887 1545 aa28.92■■■□□ 2.22
USP35-202ENST00000528910 KIF13AQ9H1H9 1805 aa28.92■■■□□ 2.22
USP35-202ENST00000528910 UACAQ9BZF9 1416 aa28.88■■■□□ 2.21
USP35-202ENST00000528910 ABCA8O94911 1581 aa28.82■■■□□ 2.2
USP35-202ENST00000528910 DIP2BQ9P265 1576 aa28.81■■■□□ 2.2
USP35-202ENST00000528910 KDM5BQ9UGL1 1544 aa28.79■■■□□ 2.2
USP35-202ENST00000528910 TTBK1Q5TCY1 1321 aaPredicted RBP28.79■■■□□ 2.2
USP35-202ENST00000528910 NPM1P06748 294 aaKnown RBP eCLIP28.79■■■□□ 2.2
USP35-202ENST00000528910 ABCC10Q5T3U5 1492 aa28.78■■■□□ 2.2
USP35-202ENST00000528910 ZCCHC11Q5TAX3 1644 aaKnown RBP28.78■■■□□ 2.2
USP35-202ENST00000528910 PLB1Q6P1J6 1458 aa28.77■■■□□ 2.2
USP35-202ENST00000528910 EFCAB5A4FU69 1503 aa28.76■■■□□ 2.19
USP35-202ENST00000528910 ASXL2Q76L83 1435 aa28.67■■■□□ 2.18
USP35-202ENST00000528910 RAPGEF6Q8TEU7 1601 aa28.65■■■□□ 2.18
USP35-202ENST00000528910 GLI2P10070 1586 aa28.62■■■□□ 2.17
USP35-202ENST00000528910 FHOD3Q2V2M9 1422 aa28.61■■■□□ 2.17
USP35-202ENST00000528910 P3H3Q8IVL6 736 aa28.59■■■□□ 2.17
USP35-202ENST00000528910 UBTFP17480 764 aaKnown RBP28.57■■■□□ 2.16
USP35-202ENST00000528910 FAM69CQ0P6D2 419 aa28.56■■■□□ 2.16
USP35-202ENST00000528910 WDR7Q9Y4E6 1490 aa28.55■■■□□ 2.16
USP35-202ENST00000528910 EPRSP07814 1512 aaKnown RBP28.54■■■□□ 2.16
USP35-202ENST00000528910 ARHGAP35Q9NRY4 1499 aa28.53■■■□□ 2.16
USP35-202ENST00000528910 MAP3K4Q9Y6R4 1608 aa28.52■■■□□ 2.16
USP35-202ENST00000528910 TSPOAP1O95153 1857 aa28.52■■■□□ 2.16
USP35-202ENST00000528910 PPRC1Q5VV67 1664 aaKnown RBP28.51■■■□□ 2.16
USP35-202ENST00000528910 RANGAP1P46060 587 aaPredicted RBP28.5■■■□□ 2.15
USP35-202ENST00000528910 EHMT2Q96KQ7 1210 aa28.5■■■□□ 2.15
USP35-202ENST00000528910 NUP153P49790 1475 aaKnown RBP28.49■■■□□ 2.15
USP35-202ENST00000528910 ATP10BO94823 1461 aa28.48■■■□□ 2.15
USP35-202ENST00000528910 CFAP43Q8NDM7 1665 aa28.42■■■□□ 2.14
USP35-202ENST00000528910 FMN1Q68DA7 1419 aa28.4■■■□□ 2.14
USP35-202ENST00000528910 HECW1Q76N89 1606 aa28.37■■■□□ 2.13
USP35-202ENST00000528910 KDM6BO15054 1643 aa28.35■■■□□ 2.13
USP35-202ENST00000528910 ABCA9Q8IUA7 1624 aa28.32■■■□□ 2.12
USP35-202ENST00000528910 ARID3CA6NKF2 412 aa28.31■■■□□ 2.12
USP35-202ENST00000528910 TEX14Q8IWB6 1497 aa28.3■■■□□ 2.12
USP35-202ENST00000528910 LRRIQ1Q96JM4 1722 aa28.28■■■□□ 2.12
USP35-202ENST00000528910 MAGI3Q5TCQ9 1506 aa28.28■■■□□ 2.12
USP35-202ENST00000528910 CDK13Q14004 1512 aaKnown RBP28.27■■■□□ 2.12
USP35-202ENST00000528910 PCF11O94913 1555 aaKnown RBP28.26■■■□□ 2.11
USP35-202ENST00000528910 CLIP1P30622 1438 aa28.26■■■□□ 2.11
USP35-202ENST00000528910 CD109Q6YHK3 1445 aa28.22■■■□□ 2.11
USP35-202ENST00000528910 KCNH8Q96L42 1107 aa28.19■■■□□ 2.1
USP35-202ENST00000528910 CASKIN1Q8WXD9 1431 aa28.18■■■□□ 2.1
USP35-202ENST00000528910 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.16■■■□□ 2.1
USP35-202ENST00000528910 HNRNPUL2Q1KMD3 747 aaKnown RBP28.16■■■□□ 2.1
USP35-202ENST00000528910 FYCO1Q9BQS8 1478 aa28.15■■■□□ 2.1
USP35-202ENST00000528910 CEP162Q5TB80 1403 aa28.13■■■□□ 2.09
USP35-202ENST00000528910 CCDC18Q5T9S5 1454 aa28.12■■■□□ 2.09
USP35-202ENST00000528910 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.12■■■□□ 2.09
USP35-202ENST00000528910 TTC37Q6PGP7 1564 aa28.11■■■□□ 2.09
USP35-202ENST00000528910 COL17A1Q9UMD9 1497 aaPredicted RBP28.11■■■□□ 2.09
USP35-202ENST00000528910 PLEKHD1A6NEE1 506 aa28.1■■■□□ 2.09
USP35-202ENST00000528910 KIF14Q15058 1648 aa28.05■■■□□ 2.08
USP35-202ENST00000528910 CFAP74Q9C0B2 1584 aa28.03■■■□□ 2.08
USP35-202ENST00000528910 NEO1Q92859 1461 aa28.03■■■□□ 2.08
USP35-202ENST00000528910 TROQ12816 1431 aaPredicted RBP28.03■■■□□ 2.08
USP35-202ENST00000528910 ARAP3Q8WWN8 1544 aa28.02■■■□□ 2.08
USP35-202ENST00000528910 MYO5CQ9NQX4 1742 aa28.01■■■□□ 2.07
USP35-202ENST00000528910 ATP1B4Q9UN42 357 aaPredicted RBP28■■■□□ 2.07
USP35-202ENST00000528910 PHLDB1Q86UU1 1377 aa27.99■■■□□ 2.07
USP35-202ENST00000528910 CDK11AQ9UQ88 783 aaPredicted RBP27.97■■■□□ 2.07
USP35-202ENST00000528910 LOC105371045A0A1W2PR82 267 aa27.93■■■□□ 2.06
USP35-202ENST00000528910 FRMPD1Q5SYB0 1578 aa27.92■■■□□ 2.06
USP35-202ENST00000528910 FANCAO15360 1455 aa27.92■■■□□ 2.06
USP35-202ENST00000528910 PLCH2O75038 1416 aa27.89■■■□□ 2.06
USP35-202ENST00000528910 RICTORQ6R327 1708 aa27.89■■■□□ 2.05
USP35-202ENST00000528910 PREX2Q70Z35 1606 aa27.87■■■□□ 2.05
USP35-202ENST00000528910 CDC42BPBQ9Y5S2 1711 aa27.84■■■□□ 2.05
USP35-202ENST00000528910 AKNAQ7Z591 1439 aa27.84■■■□□ 2.05
USP35-202ENST00000528910 CDC42BPAQ5VT25 1732 aa27.83■■■□□ 2.05
USP35-202ENST00000528910 VPS8Q8N3P4 1428 aa27.82■■■□□ 2.04
USP35-202ENST00000528910 EHBP1L1Q8N3D4 1523 aa27.79■■■□□ 2.04
USP35-202ENST00000528910 ZMYM4Q5VZL5 1548 aa27.78■■■□□ 2.04
USP35-202ENST00000528910 DENND4BO75064 1496 aaPredicted RBP27.78■■■□□ 2.04
USP35-202ENST00000528910 ARHGAP5Q13017 1502 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms