RNA–Protein interactions for RNA: ENST00000528906.5

PSMD13-208, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

TSL 5

Gene PSMD13, Length 858 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-208ENST00000528906 KIAA0586Q9BVV6 1533 aa20.88■□□□□ 0.93
PSMD13-208ENST00000528906 CEP162Q5TB80 1403 aa20.85■□□□□ 0.93
PSMD13-208ENST00000528906 CLIP1P30622 1438 aa20.82■□□□□ 0.92
PSMD13-208ENST00000528906 OSCARQ8IYS5 282 aa20.82■□□□□ 0.92
PSMD13-208ENST00000528906 RANGAP1P46060 587 aaPredicted RBP20.81■□□□□ 0.92
PSMD13-208ENST00000528906 JPH4Q96JJ6 628 aa20.79■□□□□ 0.92
PSMD13-208ENST00000528906 CEP170Q5SW79 1584 aa20.77■□□□□ 0.92
PSMD13-208ENST00000528906 IQGAP2Q13576 1575 aa20.75■□□□□ 0.91
PSMD13-208ENST00000528906 CHD1O14646 1710 aa20.73■□□□□ 0.91
PSMD13-208ENST00000528906 CTTNBP2Q8WZ74 1663 aa20.71■□□□□ 0.91
PSMD13-208ENST00000528906 UGGT2Q9NYU1 1516 aa20.7■□□□□ 0.9
PSMD13-208ENST00000528906 ARHGAP35Q9NRY4 1499 aa20.69■□□□□ 0.9
PSMD13-208ENST00000528906 EFCAB5A4FU69 1503 aa20.68■□□□□ 0.9
PSMD13-208ENST00000528906 CARMIL2Q6F5E8 1435 aa20.67■□□□□ 0.9
PSMD13-208ENST00000528906 P3H3Q8IVL6 736 aa20.66■□□□□ 0.9
PSMD13-208ENST00000528906 CLASP1Q7Z460 1538 aa20.63■□□□□ 0.89
PSMD13-208ENST00000528906 PRG4Q92954 1404 aaPredicted RBP20.62■□□□□ 0.89
PSMD13-208ENST00000528906 ARAP1Q96P48 1450 aa20.6■□□□□ 0.89
PSMD13-208ENST00000528906 DISP1Q96F81 1524 aa20.59■□□□□ 0.89
PSMD13-208ENST00000528906 SAMD9Q5K651 1589 aa20.59■□□□□ 0.89
PSMD13-208ENST00000528906 FHOD3Q2V2M9 1422 aa20.58■□□□□ 0.88
PSMD13-208ENST00000528906 VPS8Q8N3P4 1428 aa20.57■□□□□ 0.88
PSMD13-208ENST00000528906 FMN1Q68DA7 1419 aa20.56■□□□□ 0.88
PSMD13-208ENST00000528906 SHROOM2Q13796 1616 aa20.54■□□□□ 0.88
PSMD13-208ENST00000528906 KIAA0556O60303 1618 aa20.52■□□□□ 0.88
PSMD13-208ENST00000528906 PTPRGP23470 1445 aa20.5■□□□□ 0.87
PSMD13-208ENST00000528906 APLP2Q06481 763 aa20.48■□□□□ 0.87
PSMD13-208ENST00000528906 TTBK1Q5TCY1 1321 aaPredicted RBP20.46■□□□□ 0.87
PSMD13-208ENST00000528906 CASKIN1Q8WXD9 1431 aa20.45■□□□□ 0.86
PSMD13-208ENST00000528906 ATP1B4Q9UN42 357 aaPredicted RBP20.43■□□□□ 0.86
PSMD13-208ENST00000528906 FYCO1Q9BQS8 1478 aa20.39■□□□□ 0.85
PSMD13-208ENST00000528906 ERCC6L2Q5T890 1561 aa20.38■□□□□ 0.85
PSMD13-208ENST00000528906 UACAQ9BZF9 1416 aa20.35■□□□□ 0.85
PSMD13-208ENST00000528906 PLB1Q6P1J6 1458 aa20.33■□□□□ 0.85
PSMD13-208ENST00000528906 ARHGEF11O15085 1522 aa20.32■□□□□ 0.84
PSMD13-208ENST00000528906 MAP3K1Q13233 1512 aa20.31■□□□□ 0.84
PSMD13-208ENST00000528906 PCF11O94913 1555 aaKnown RBP20.29■□□□□ 0.84
PSMD13-208ENST00000528906 CDK11AQ9UQ88 783 aaPredicted RBP20.29■□□□□ 0.84
PSMD13-208ENST00000528906 ABCA8O94911 1581 aa20.29■□□□□ 0.84
PSMD13-208ENST00000528906 CCDC18Q5T9S5 1454 aa20.28■□□□□ 0.84
PSMD13-208ENST00000528906 UHRF1BP1LA0JNW5 1464 aa20.27■□□□□ 0.84
PSMD13-208ENST00000528906 NUP153P49790 1475 aaKnown RBP20.27■□□□□ 0.84
PSMD13-208ENST00000528906 HECW1Q76N89 1606 aa20.27■□□□□ 0.83
PSMD13-208ENST00000528906 RAPGEF6Q8TEU7 1601 aa20.27■□□□□ 0.83
PSMD13-208ENST00000528906 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.26■□□□□ 0.83
PSMD13-208ENST00000528906 HNRNPUL2Q1KMD3 747 aaKnown RBP20.26■□□□□ 0.83
PSMD13-208ENST00000528906 EPRSP07814 1512 aaKnown RBP20.26■□□□□ 0.83
PSMD13-208ENST00000528906 ABCC2Q92887 1545 aa20.23■□□□□ 0.83
PSMD13-208ENST00000528906 ARID3CA6NKF2 412 aa20.23■□□□□ 0.83
PSMD13-208ENST00000528906 CYB5RLQ6IPT4 315 aa20.23■□□□□ 0.83
PSMD13-208ENST00000528906 KANK4Q5T7N3 995 aaPredicted RBP20.22■□□□□ 0.83
PSMD13-208ENST00000528906 NPM1P06748 294 aaKnown RBP eCLIP20.21■□□□□ 0.83
PSMD13-208ENST00000528906 ATP10BO94823 1461 aa20.2■□□□□ 0.82
PSMD13-208ENST00000528906 PLEKHD1A6NEE1 506 aa20.2■□□□□ 0.82
PSMD13-208ENST00000528906 PPARGC1BQ86YN6 1023 aaKnown RBP20.2■□□□□ 0.82
PSMD13-208ENST00000528906 TIAM1Q13009 1591 aa20.2■□□□□ 0.82
PSMD13-208ENST00000528906 MTUS2Q5JR59 1369 aa20.19■□□□□ 0.82
PSMD13-208ENST00000528906 RIMBP3CA6NJZ7 1639 aa20.17■□□□□ 0.82
PSMD13-208ENST00000528906 RIMBP3BA6NNM3 1639 aa20.17■□□□□ 0.82
PSMD13-208ENST00000528906 RIMBP3Q9UFD9 1639 aa20.17■□□□□ 0.82
PSMD13-208ENST00000528906 DNAJC5Q9H3Z4 198 aa20.17■□□□□ 0.82
PSMD13-208ENST00000528906 LRRC9Q6ZRR7 1453 aa20.17■□□□□ 0.82
PSMD13-208ENST00000528906 KDM5BQ9UGL1 1544 aa20.16■□□□□ 0.82
PSMD13-208ENST00000528906 CDK13Q14004 1512 aaKnown RBP20.14■□□□□ 0.81
PSMD13-208ENST00000528906 TROQ12816 1431 aaPredicted RBP20.1■□□□□ 0.81
PSMD13-208ENST00000528906 CFAP43Q8NDM7 1665 aa20.09■□□□□ 0.81
PSMD13-208ENST00000528906 ADCY10Q96PN6 1610 aa20.08■□□□□ 0.8
PSMD13-208ENST00000528906 EHBP1L1Q8N3D4 1523 aa20.07■□□□□ 0.8
PSMD13-208ENST00000528906 LRRIQ1Q96JM4 1722 aa20.02■□□□□ 0.8
PSMD13-208ENST00000528906 TRIM26Q12899 539 aaPredicted RBP20.02■□□□□ 0.8
PSMD13-208ENST00000528906 MAGI3Q5TCQ9 1506 aa20.02■□□□□ 0.79
PSMD13-208ENST00000528906 KCNH8Q96L42 1107 aa20■□□□□ 0.79
PSMD13-208ENST00000528906 NCOA2Q15596 1464 aa19.99■□□□□ 0.79
PSMD13-208ENST00000528906 ZCCHC11Q5TAX3 1644 aaKnown RBP19.99■□□□□ 0.79
PSMD13-208ENST00000528906 ASXL2Q76L83 1435 aa19.98■□□□□ 0.79
PSMD13-208ENST00000528906 WDR7Q9Y4E6 1490 aa19.97■□□□□ 0.79
PSMD13-208ENST00000528906 PHLDB1Q86UU1 1377 aa19.95■□□□□ 0.79
PSMD13-208ENST00000528906 CCNB3Q8WWL7 1395 aa19.95■□□□□ 0.79
PSMD13-208ENST00000528906 SUPT6HQ7KZ85 1726 aaKnown RBP19.93■□□□□ 0.78
PSMD13-208ENST00000528906 MYOM3Q5VTT5 1437 aa19.92■□□□□ 0.78
PSMD13-208ENST00000528906 MAPKBP1O60336 1514 aa19.91■□□□□ 0.78
PSMD13-208ENST00000528906 KIF14Q15058 1648 aa19.9■□□□□ 0.78
PSMD13-208ENST00000528906 ABCC10Q5T3U5 1492 aa19.89■□□□□ 0.77
PSMD13-208ENST00000528906 MIA2Q96PC5 1412 aa19.89■□□□□ 0.77
PSMD13-208ENST00000528906 RRBP1Q9P2E9 1410 aaKnown RBP19.89■□□□□ 0.77
PSMD13-208ENST00000528906 CFDP1Q9UEE9 299 aaPredicted RBP19.89■□□□□ 0.77
PSMD13-208ENST00000528906 GPATCH8Q9UKJ3 1502 aaKnown RBP19.86■□□□□ 0.77
PSMD13-208ENST00000528906 FGD6Q6ZV73 1430 aa19.86■□□□□ 0.77
PSMD13-208ENST00000528906 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.85■□□□□ 0.775e-6■■■□□ 14.8
PSMD13-208ENST00000528906 FAM50AQ14320 339 aaKnown RBP19.84■□□□□ 0.77
PSMD13-208ENST00000528906 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.82■□□□□ 0.769e-11■■■□□ 17.3
PSMD13-208ENST00000528906 EFCAB2Q5VUJ9 269 aa19.82■□□□□ 0.76
PSMD13-208ENST00000528906 PCGF6Q9BYE7 350 aa19.82■□□□□ 0.76
PSMD13-208ENST00000528906 PLCH2O75038 1416 aa19.82■□□□□ 0.76
PSMD13-208ENST00000528906 FAM69CQ0P6D2 419 aa19.8■□□□□ 0.76
PSMD13-208ENST00000528906 ZNF777Q9ULD5 760 aaPredicted RBP19.78■□□□□ 0.76
PSMD13-208ENST00000528906 CD109Q6YHK3 1445 aa19.77■□□□□ 0.76
PSMD13-208ENST00000528906 TCOF1Q13428 1488 aaKnown RBP19.76■□□□□ 0.75
PSMD13-208ENST00000528906 ARAP3Q8WWN8 1544 aa19.75■□□□□ 0.75
PSMD13-208ENST00000528906 GLI2P10070 1586 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms