RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 IQGAP2Q13576 1575 aa12.81□□□□□ -0.36
SSBP3-211ENST00000528787 CEP170Q5SW79 1584 aa12.81□□□□□ -0.36
SSBP3-211ENST00000528787 CLASP1Q7Z460 1538 aa12.8□□□□□ -0.36
SSBP3-211ENST00000528787 CARMIL2Q6F5E8 1435 aa12.79□□□□□ -0.36
SSBP3-211ENST00000528787 TNIKQ9UKE5 1360 aa12.76□□□□□ -0.37
SSBP3-211ENST00000528787 SHROOM2Q13796 1616 aa12.76□□□□□ -0.37
SSBP3-211ENST00000528787 JPH4Q96JJ6 628 aa12.75□□□□□ -0.37
SSBP3-211ENST00000528787 EFCAB5A4FU69 1503 aa12.74□□□□□ -0.37
SSBP3-211ENST00000528787 UGGT2Q9NYU1 1516 aa12.73□□□□□ -0.37
SSBP3-211ENST00000528787 PRG4Q92954 1404 aaPredicted RBP12.68□□□□□ -0.38
SSBP3-211ENST00000528787 KIAA0556O60303 1618 aa12.66□□□□□ -0.38
SSBP3-211ENST00000528787 SAMD9Q5K651 1589 aa12.65□□□□□ -0.38
SSBP3-211ENST00000528787 DNAJC5Q9H3Z4 198 aa12.65□□□□□ -0.38
SSBP3-211ENST00000528787 ARHGEF11O15085 1522 aa12.64□□□□□ -0.39
SSBP3-211ENST00000528787 EHMT2Q96KQ7 1210 aa12.64□□□□□ -0.39
SSBP3-211ENST00000528787 CLIP1P30622 1438 aa12.63□□□□□ -0.39
SSBP3-211ENST00000528787 FMN1Q68DA7 1419 aa12.63□□□□□ -0.39
SSBP3-211ENST00000528787 CEP162Q5TB80 1403 aa12.62□□□□□ -0.39
SSBP3-211ENST00000528787 RIMBP3CA6NJZ7 1639 aa12.61□□□□□ -0.39
SSBP3-211ENST00000528787 RIMBP3BA6NNM3 1639 aa12.61□□□□□ -0.39
SSBP3-211ENST00000528787 RIMBP3Q9UFD9 1639 aa12.61□□□□□ -0.39
SSBP3-211ENST00000528787 DISP1Q96F81 1524 aa12.61□□□□□ -0.39
SSBP3-211ENST00000528787 PTPRGP23470 1445 aa12.61□□□□□ -0.39
SSBP3-211ENST00000528787 LOC105371045A0A1W2PR82 267 aa12.59□□□□□ -0.39
SSBP3-211ENST00000528787 RANGAP1P46060 587 aaPredicted RBP12.57□□□□□ -0.4
SSBP3-211ENST00000528787 ARHGAP35Q9NRY4 1499 aa12.56□□□□□ -0.4
SSBP3-211ENST00000528787 NPM1P06748 294 aaKnown RBP eCLIP12.55□□□□□ -0.4
SSBP3-211ENST00000528787 FHOD3Q2V2M9 1422 aa12.53□□□□□ -0.4
SSBP3-211ENST00000528787 UACAQ9BZF9 1416 aa12.53□□□□□ -0.4
SSBP3-211ENST00000528787 UHRF1BP1LA0JNW5 1464 aa12.53□□□□□ -0.4
SSBP3-211ENST00000528787 ARAP1Q96P48 1450 aa12.52□□□□□ -0.41
SSBP3-211ENST00000528787 ERCC6L2Q5T890 1561 aa12.52□□□□□ -0.41
SSBP3-211ENST00000528787 HECW1Q76N89 1606 aa12.51□□□□□ -0.41
SSBP3-211ENST00000528787 RAPGEF6Q8TEU7 1601 aa12.51□□□□□ -0.41
SSBP3-211ENST00000528787 P3H3Q8IVL6 736 aa12.51□□□□□ -0.41
SSBP3-211ENST00000528787 FYCO1Q9BQS8 1478 aa12.5□□□□□ -0.41
SSBP3-211ENST00000528787 ABCC2Q92887 1545 aa12.5□□□□□ -0.41
SSBP3-211ENST00000528787 CCDC18Q5T9S5 1454 aa12.49□□□□□ -0.41
SSBP3-211ENST00000528787 APLP2Q06481 763 aa12.49□□□□□ -0.41
SSBP3-211ENST00000528787 CYB5RLQ6IPT4 315 aa12.49□□□□□ -0.41
SSBP3-211ENST00000528787 CDK11AQ9UQ88 783 aaPredicted RBP12.49□□□□□ -0.41
SSBP3-211ENST00000528787 ABCA8O94911 1581 aa12.48□□□□□ -0.41
SSBP3-211ENST00000528787 VPS8Q8N3P4 1428 aa12.48□□□□□ -0.41
SSBP3-211ENST00000528787 CASKIN1Q8WXD9 1431 aa12.48□□□□□ -0.41
SSBP3-211ENST00000528787 TTBK1Q5TCY1 1321 aaPredicted RBP12.46□□□□□ -0.41
SSBP3-211ENST00000528787 ADCY10Q96PN6 1610 aa12.44□□□□□ -0.42
SSBP3-211ENST00000528787 KDM5BQ9UGL1 1544 aa12.43□□□□□ -0.42
SSBP3-211ENST00000528787 PLB1Q6P1J6 1458 aa12.43□□□□□ -0.42
SSBP3-211ENST00000528787 ATP1B4Q9UN42 357 aaPredicted RBP12.42□□□□□ -0.42
SSBP3-211ENST00000528787 MAP3K1Q13233 1512 aa12.42□□□□□ -0.42
SSBP3-211ENST00000528787 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.41□□□□□ -0.42
SSBP3-211ENST00000528787 PCF11O94913 1555 aaKnown RBP12.41□□□□□ -0.42
SSBP3-211ENST00000528787 HNRNPUL2Q1KMD3 747 aaKnown RBP12.41□□□□□ -0.42
SSBP3-211ENST00000528787 PLEKHD1A6NEE1 506 aa12.4□□□□□ -0.42
SSBP3-211ENST00000528787 MAPKBP1O60336 1514 aa12.4□□□□□ -0.42
SSBP3-211ENST00000528787 EPRSP07814 1512 aaKnown RBP12.4□□□□□ -0.42
SSBP3-211ENST00000528787 ZCCHC11Q5TAX3 1644 aaKnown RBP12.4□□□□□ -0.42
SSBP3-211ENST00000528787 NUP153P49790 1475 aaKnown RBP12.4□□□□□ -0.43
SSBP3-211ENST00000528787 ATP10BO94823 1461 aa12.36□□□□□ -0.43
SSBP3-211ENST00000528787 CFAP43Q8NDM7 1665 aa12.35□□□□□ -0.43
SSBP3-211ENST00000528787 WDR7Q9Y4E6 1490 aa12.34□□□□□ -0.43
SSBP3-211ENST00000528787 MTUS2Q5JR59 1369 aa12.33□□□□□ -0.44
SSBP3-211ENST00000528787 TIAM1Q13009 1591 aa12.33□□□□□ -0.44
SSBP3-211ENST00000528787 EHBP1L1Q8N3D4 1523 aa12.32□□□□□ -0.44
SSBP3-211ENST00000528787 ASXL2Q76L83 1435 aa12.32□□□□□ -0.44
SSBP3-211ENST00000528787 TROQ12816 1431 aaPredicted RBP12.31□□□□□ -0.44
SSBP3-211ENST00000528787 KIF14Q15058 1648 aa12.31□□□□□ -0.44
SSBP3-211ENST00000528787 LRRIQ1Q96JM4 1722 aa12.3□□□□□ -0.44
SSBP3-211ENST00000528787 CDK13Q14004 1512 aaKnown RBP12.3□□□□□ -0.44
SSBP3-211ENST00000528787 SUPT6HQ7KZ85 1726 aaKnown RBP12.29□□□□□ -0.44
SSBP3-211ENST00000528787 GLI2P10070 1586 aa12.28□□□□□ -0.44
SSBP3-211ENST00000528787 ABCC10Q5T3U5 1492 aa12.27□□□□□ -0.45
SSBP3-211ENST00000528787 LRRC9Q6ZRR7 1453 aa12.27□□□□□ -0.45
SSBP3-211ENST00000528787 ARID3CA6NKF2 412 aa12.26□□□□□ -0.45
SSBP3-211ENST00000528787 ABCA9Q8IUA7 1624 aa12.24□□□□□ -0.45
SSBP3-211ENST00000528787 TEX14Q8IWB6 1497 aa12.24□□□□□ -0.45
SSBP3-211ENST00000528787 CFAP74Q9C0B2 1584 aa12.24□□□□□ -0.45
SSBP3-211ENST00000528787 ITSN2Q9NZM3 1697 aa12.24□□□□□ -0.45
SSBP3-211ENST00000528787 MYO5CQ9NQX4 1742 aa12.23□□□□□ -0.45
SSBP3-211ENST00000528787 DIP2BQ9P265 1576 aa12.23□□□□□ -0.45
SSBP3-211ENST00000528787 ARAP3Q8WWN8 1544 aa12.23□□□□□ -0.45
SSBP3-211ENST00000528787 PHLDB1Q86UU1 1377 aa12.23□□□□□ -0.45
SSBP3-211ENST00000528787 KCNH8Q96L42 1107 aa12.23□□□□□ -0.45
SSBP3-211ENST00000528787 FAM69CQ0P6D2 419 aa12.22□□□□□ -0.45
SSBP3-211ENST00000528787 CCNB3Q8WWL7 1395 aa12.21□□□□□ -0.45
SSBP3-211ENST00000528787 TRHP20396 242 aaPredicted RBP12.21□□□□□ -0.45
SSBP3-211ENST00000528787 KIF13AQ9H1H9 1805 aa12.21□□□□□ -0.46
SSBP3-211ENST00000528787 MAP3K4Q9Y6R4 1608 aa12.2□□□□□ -0.46
SSBP3-211ENST00000528787 CD109Q6YHK3 1445 aa12.2□□□□□ -0.46
SSBP3-211ENST00000528787 MAGI3Q5TCQ9 1506 aa12.18□□□□□ -0.46
SSBP3-211ENST00000528787 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.18□□□□□ -0.46
SSBP3-211ENST00000528787 NCOA2Q15596 1464 aa12.18□□□□□ -0.46
SSBP3-211ENST00000528787 PLEKHH2Q8IVE3 1493 aa12.17□□□□□ -0.46
SSBP3-211ENST00000528787 EFCAB2Q5VUJ9 269 aa12.17□□□□□ -0.46
SSBP3-211ENST00000528787 PLCH2O75038 1416 aa12.17□□□□□ -0.46
SSBP3-211ENST00000528787 MIA2Q96PC5 1412 aa12.17□□□□□ -0.46
SSBP3-211ENST00000528787 PREX2Q70Z35 1606 aa12.16□□□□□ -0.46
SSBP3-211ENST00000528787 NEO1Q92859 1461 aa12.15□□□□□ -0.46
SSBP3-211ENST00000528787 CFDP1Q9UEE9 299 aaPredicted RBP12.15□□□□□ -0.46
SSBP3-211ENST00000528787 ARHGAP5Q13017 1502 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms