RNA–Protein interactions for RNA: ENST00000528744.5

SRPRA-203, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 856 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-203ENST00000528744 PRG4Q92954 1404 aaPredicted RBP20.21■□□□□ 0.83
SRPRA-203ENST00000528744 SHROOM2Q13796 1616 aa20.18■□□□□ 0.82
SRPRA-203ENST00000528744 KIF27Q86VH2 1401 aa20.15■□□□□ 0.82
SRPRA-203ENST00000528744 CARMIL1Q5VZK9 1371 aa20.09■□□□□ 0.81
SRPRA-203ENST00000528744 SENP3Q9H4L4 574 aaPredicted RBP20.08■□□□□ 0.81
SRPRA-203ENST00000528744 RUSC2Q8N2Y8 1516 aa20.06■□□□□ 0.8
SRPRA-203ENST00000528744 KIAA0586Q9BVV6 1533 aa20.06■□□□□ 0.8
SRPRA-203ENST00000528744 TTBK1Q5TCY1 1321 aaPredicted RBP19.97■□□□□ 0.79
SRPRA-203ENST00000528744 FAM69CQ0P6D2 419 aa19.94■□□□□ 0.78
SRPRA-203ENST00000528744 CUL7Q14999 1698 aa19.94■□□□□ 0.78
SRPRA-203ENST00000528744 NPM1P06748 294 aaKnown RBP eCLIP19.93■□□□□ 0.78
SRPRA-203ENST00000528744 PTPRGP23470 1445 aa19.91■□□□□ 0.78
SRPRA-203ENST00000528744 ADCY10Q96PN6 1610 aa19.88■□□□□ 0.77
SRPRA-203ENST00000528744 ABCC10Q5T3U5 1492 aa19.87■□□□□ 0.77
SRPRA-203ENST00000528744 TNIKQ9UKE5 1360 aa19.85■□□□□ 0.77
SRPRA-203ENST00000528744 RAPGEF2Q9Y4G8 1499 aa19.84■□□□□ 0.77
SRPRA-203ENST00000528744 DISP1Q96F81 1524 aa19.82■□□□□ 0.76
SRPRA-203ENST00000528744 KIF13AQ9H1H9 1805 aa19.82■□□□□ 0.76
SRPRA-203ENST00000528744 MAPKBP1O60336 1514 aa19.81■□□□□ 0.76
SRPRA-203ENST00000528744 CARMIL2Q6F5E8 1435 aa19.8■□□□□ 0.76
SRPRA-203ENST00000528744 IQGAP2Q13576 1575 aa19.78■□□□□ 0.76
SRPRA-203ENST00000528744 DIP2BQ9P265 1576 aa19.74■□□□□ 0.75
SRPRA-203ENST00000528744 UACAQ9BZF9 1416 aa19.73■□□□□ 0.75
SRPRA-203ENST00000528744 ABCC2Q92887 1545 aa19.72■□□□□ 0.75
SRPRA-203ENST00000528744 UGGT2Q9NYU1 1516 aa19.72■□□□□ 0.75
SRPRA-203ENST00000528744 PRXQ9BXM0 1461 aa19.71■□□□□ 0.75
SRPRA-203ENST00000528744 ASXL2Q76L83 1435 aa19.7■□□□□ 0.74
SRPRA-203ENST00000528744 UHRF1BP1LA0JNW5 1464 aa19.7■□□□□ 0.74
SRPRA-203ENST00000528744 CSRNP3Q8WYN3 585 aa19.64■□□□□ 0.73
SRPRA-203ENST00000528744 KDM5BQ9UGL1 1544 aa19.63■□□□□ 0.73
SRPRA-203ENST00000528744 KIAA0556O60303 1618 aa19.62■□□□□ 0.73
SRPRA-203ENST00000528744 PLB1Q6P1J6 1458 aa19.62■□□□□ 0.73
SRPRA-203ENST00000528744 P3H3Q8IVL6 736 aa19.61■□□□□ 0.73
SRPRA-203ENST00000528744 KDM4FA0A1W2PPD8 638 aa19.58■□□□□ 0.72
SRPRA-203ENST00000528744 COL17A1Q9UMD9 1497 aaPredicted RBP19.57■□□□□ 0.72
SRPRA-203ENST00000528744 EPRSP07814 1512 aaKnown RBP19.56■□□□□ 0.72
SRPRA-203ENST00000528744 TSPOAP1O95153 1857 aa19.56■□□□□ 0.72
SRPRA-203ENST00000528744 GLI2P10070 1586 aa19.55■□□□□ 0.72
SRPRA-203ENST00000528744 FAM9AQ8IZU1 332 aaPredicted RBP19.55■□□□□ 0.72
SRPRA-203ENST00000528744 ARID3CA6NKF2 412 aa19.53■□□□□ 0.72
SRPRA-203ENST00000528744 KCNH8Q96L42 1107 aa19.52■□□□□ 0.72
SRPRA-203ENST00000528744 KDM6BO15054 1643 aa19.51■□□□□ 0.71
SRPRA-203ENST00000528744 PPRC1Q5VV67 1664 aaKnown RBP19.5■□□□□ 0.71
SRPRA-203ENST00000528744 GOLGA3Q08378 1498 aa19.5■□□□□ 0.71
SRPRA-203ENST00000528744 ZCCHC11Q5TAX3 1644 aaKnown RBP19.5■□□□□ 0.71
SRPRA-203ENST00000528744 ABCA8O94911 1581 aa19.49■□□□□ 0.71
SRPRA-203ENST00000528744 CTTNBP2Q8WZ74 1663 aa19.47■□□□□ 0.71
SRPRA-203ENST00000528744 RANGAP1P46060 587 aaPredicted RBP19.47■□□□□ 0.71
SRPRA-203ENST00000528744 WDR7Q9Y4E6 1490 aa19.46■□□□□ 0.71
SRPRA-203ENST00000528744 ATP10BO94823 1461 aa19.43■□□□□ 0.7
SRPRA-203ENST00000528744 MAP3K4Q9Y6R4 1608 aa19.4■□□□□ 0.7
SRPRA-203ENST00000528744 CD109Q6YHK3 1445 aa19.4■□□□□ 0.7
SRPRA-203ENST00000528744 EHMT2Q96KQ7 1210 aa19.38■□□□□ 0.69
SRPRA-203ENST00000528744 EEA1Q15075 1411 aa19.37■□□□□ 0.69
SRPRA-203ENST00000528744 TEX14Q8IWB6 1497 aa19.34■□□□□ 0.69
SRPRA-203ENST00000528744 FHOD3Q2V2M9 1422 aa19.34■□□□□ 0.69
SRPRA-203ENST00000528744 SAMD9Q5K651 1589 aa19.33■□□□□ 0.69
SRPRA-203ENST00000528744 MAGI3Q5TCQ9 1506 aa19.33■□□□□ 0.68
SRPRA-203ENST00000528744 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.29■□□□□ 0.68
SRPRA-203ENST00000528744 HNRNPUL2Q1KMD3 747 aaKnown RBP19.29■□□□□ 0.68
SRPRA-203ENST00000528744 NUP153P49790 1475 aaKnown RBP19.28■□□□□ 0.68
SRPRA-203ENST00000528744 ADGRL1O94910 1474 aa19.25■□□□□ 0.67
SRPRA-203ENST00000528744 UBTFP17480 764 aaKnown RBP19.23■□□□□ 0.67
SRPRA-203ENST00000528744 RAPGEF6Q8TEU7 1601 aa19.22■□□□□ 0.67
SRPRA-203ENST00000528744 RAPGEF3O95398 923 aa19.22■□□□□ 0.67
SRPRA-203ENST00000528744 CFAP43Q8NDM7 1665 aa19.21■□□□□ 0.67
SRPRA-203ENST00000528744 PLEKHD1A6NEE1 506 aa19.2■□□□□ 0.66
SRPRA-203ENST00000528744 KIF21BO75037 1637 aa19.19■□□□□ 0.66
SRPRA-203ENST00000528744 ARAP3Q8WWN8 1544 aa19.18■□□□□ 0.66
SRPRA-203ENST00000528744 ABCA9Q8IUA7 1624 aa19.14■□□□□ 0.66
SRPRA-203ENST00000528744 ARHGAP35Q9NRY4 1499 aa19.11■□□□□ 0.65
SRPRA-203ENST00000528744 PHLDB1Q86UU1 1377 aa19.11■□□□□ 0.65
SRPRA-203ENST00000528744 ATP1B4Q9UN42 357 aaPredicted RBP19.11■□□□□ 0.65
SRPRA-203ENST00000528744 EFCAB5A4FU69 1503 aa19.1■□□□□ 0.65
SRPRA-203ENST00000528744 CDK13Q14004 1512 aaKnown RBP19.09■□□□□ 0.65
SRPRA-203ENST00000528744 NEO1Q92859 1461 aa19.08■□□□□ 0.64
SRPRA-203ENST00000528744 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.05■□□□□ 0.642e-7■■□□□ 12.7
SRPRA-203ENST00000528744 AKNAQ7Z591 1439 aa19.05■□□□□ 0.64
SRPRA-203ENST00000528744 FRMPD1Q5SYB0 1578 aa19.01■□□□□ 0.63
SRPRA-203ENST00000528744 FMN1Q68DA7 1419 aa19■□□□□ 0.63
SRPRA-203ENST00000528744 FANCAO15360 1455 aa18.99■□□□□ 0.63
SRPRA-203ENST00000528744 DENND4BO75064 1496 aaPredicted RBP18.99■□□□□ 0.63
SRPRA-203ENST00000528744 TTC37Q6PGP7 1564 aa18.98■□□□□ 0.63
SRPRA-203ENST00000528744 PLCH2O75038 1416 aa18.98■□□□□ 0.63
SRPRA-203ENST00000528744 ARID4BQ4LE39 1312 aaPredicted RBP18.96■□□□□ 0.63
SRPRA-203ENST00000528744 YEATS2Q9ULM3 1422 aa18.94■□□□□ 0.62
SRPRA-203ENST00000528744 SCAPERQ9BY12 1400 aa18.93■□□□□ 0.62
SRPRA-203ENST00000528744 EFCAB2Q5VUJ9 269 aa18.92■□□□□ 0.62
SRPRA-203ENST00000528744 CDK11AQ9UQ88 783 aaPredicted RBP18.92■□□□□ 0.62
SRPRA-203ENST00000528744 HECW2Q9P2P5 1572 aa18.92■□□□□ 0.62
SRPRA-203ENST00000528744 PTPRMP28827 1452 aa18.9■□□□□ 0.62
SRPRA-203ENST00000528744 TROQ12816 1431 aaPredicted RBP18.9■□□□□ 0.62
SRPRA-203ENST00000528744 ADAMTSL3P82987 1691 aa18.89■□□□□ 0.61
SRPRA-203ENST00000528744 AFAP1Q8N556 730 aa18.89■□□□□ 0.61
SRPRA-203ENST00000528744 ILDR1Q86SU0 546 aaPredicted RBP18.88■□□□□ 0.61
SRPRA-203ENST00000528744 RICTORQ6R327 1708 aa18.87■□□□□ 0.61
SRPRA-203ENST00000528744 HECW1Q76N89 1606 aa18.87■□□□□ 0.61
SRPRA-203ENST00000528744 KIF14Q15058 1648 aa18.86■□□□□ 0.61
SRPRA-203ENST00000528744 CASKIN1Q8WXD9 1431 aa18.86■□□□□ 0.61
SRPRA-203ENST00000528744 MLECQ14165 292 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms