RNA–Protein interactions for RNA: ENST00000528744.5

SRPRA-203, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 856 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-203ENST00000528744 NISCHQ9Y2I1 1504 aa28.84■■■□□ 2.21
SRPRA-203ENST00000528744 ABCC9O60706 1549 aa25.82■■□□□ 1.72
SRPRA-203ENST00000528744 CCDC180Q9P1Z9 1646 aa25.61■■□□□ 1.69
SRPRA-203ENST00000528744 DCAF8L2P0C7V8 631 aa24.48■■□□□ 1.51
SRPRA-203ENST00000528744 RB1CC1Q8TDY2 1594 aa24.42■■□□□ 1.5
SRPRA-203ENST00000528744 DNAJC5BQ9UF47 199 aa24.38■■□□□ 1.49
SRPRA-203ENST00000528744 NACADO15069 1562 aa24.31■■□□□ 1.48
SRPRA-203ENST00000528744 PABPN1Q86U42 306 aaKnown RBP eCLIP24.2■■□□□ 1.46
SRPRA-203ENST00000528744 MYO15BQ96JP2 1530 aa24■■□□□ 1.43
SRPRA-203ENST00000528744 ZCCHC6Q5VYS8 1495 aaKnown RBP23.9■■□□□ 1.42
SRPRA-203ENST00000528744 BICRAQ9NZM4 1560 aa23.86■■□□□ 1.41
SRPRA-203ENST00000528744 UNC13AQ9UPW8 1703 aa23.84■■□□□ 1.41
SRPRA-203ENST00000528744 AEBP2Q6ZN18 517 aaPredicted RBP23.82■■□□□ 1.4
SRPRA-203ENST00000528744 DCAF1Q9Y4B6 1507 aa23.74■■□□□ 1.39
SRPRA-203ENST00000528744 SCRIBQ14160 1630 aa23.5■■□□□ 1.35
SRPRA-203ENST00000528744 SHROOM4Q9ULL8 1493 aa23.34■■□□□ 1.33
SRPRA-203ENST00000528744 CC2D2AQ9P2K1 1620 aa23.23■■□□□ 1.31
SRPRA-203ENST00000528744 CECR2Q9BXF3 1484 aa23.21■■□□□ 1.31
SRPRA-203ENST00000528744 EIF4G1Q04637 1599 aaKnown RBP23.2■■□□□ 1.3
SRPRA-203ENST00000528744 CHIC1Q5VXU3 224 aa22.93■■□□□ 1.26
SRPRA-203ENST00000528744 NCAPD3P42695 1498 aa22.57■■□□□ 1.2
SRPRA-203ENST00000528744 ATAD2BQ9ULI0 1458 aa22.53■■□□□ 1.2
SRPRA-203ENST00000528744 SMARCA4P51532 1647 aa22.41■■□□□ 1.18
SRPRA-203ENST00000528744 SMARCA2P51531 1590 aa22.31■■□□□ 1.16
SRPRA-203ENST00000528744 BAZ1AQ9NRL2 1556 aaPredicted RBP22.29■■□□□ 1.16
SRPRA-203ENST00000528744 MROH2BQ7Z745 1585 aa22.29■■□□□ 1.16
SRPRA-203ENST00000528744 HMGXB3Q12766 1538 aa22.26■■□□□ 1.15
SRPRA-203ENST00000528744 NESP48681 1621 aa22.24■■□□□ 1.15
SRPRA-203ENST00000528744 BAZ1BQ9UIG0 1483 aaKnown RBP22.22■■□□□ 1.15
SRPRA-203ENST00000528744 PEG3Q9GZU2 1588 aa22.18■■□□□ 1.14
SRPRA-203ENST00000528744 DNAJC5Q9H3Z4 198 aa22.18■■□□□ 1.14
SRPRA-203ENST00000528744 ERCC6Q03468 1493 aa22.17■■□□□ 1.14
SRPRA-203ENST00000528744 CUX2O14529 1486 aa22.08■■□□□ 1.12
SRPRA-203ENST00000528744 WIZO95785 1651 aa21.95■■□□□ 1.1
SRPRA-203ENST00000528744 CADPSQ9ULU8 1353 aa21.91■■□□□ 1.1
SRPRA-203ENST00000528744 LAMC3Q9Y6N6 1575 aa21.9■■□□□ 1.1
SRPRA-203ENST00000528744 RSF1Q96T23 1441 aaPredicted RBP21.89■■□□□ 1.1
SRPRA-203ENST00000528744 PDS5BQ9NTI5 1447 aa21.85■■□□□ 1.09
SRPRA-203ENST00000528744 THOC2Q8NI27 1593 aaKnown RBP21.82■■□□□ 1.08
SRPRA-203ENST00000528744 KIF21AQ7Z4S6 1674 aa21.75■■□□□ 1.07
SRPRA-203ENST00000528744 MRC2Q9UBG0 1479 aa21.65■■□□□ 1.06
SRPRA-203ENST00000528744 CFTRP13569 1480 aa21.64■■□□□ 1.06
SRPRA-203ENST00000528744 TOP2AP11388 1531 aaKnown RBP21.63■■□□□ 1.05
SRPRA-203ENST00000528744 FANCD2Q9BXW9 1451 aa21.61■■□□□ 1.05
SRPRA-203ENST00000528744 WDR62O43379 1518 aa21.57■■□□□ 1.04
SRPRA-203ENST00000528744 CEP164Q9UPV0 1460 aa21.56■■□□□ 1.04
SRPRA-203ENST00000528744 CCDC88BA6NC98 1476 aa21.52■■□□□ 1.03
SRPRA-203ENST00000528744 URB2Q14146 1524 aaKnown RBP21.46■■□□□ 1.03
SRPRA-203ENST00000528744 OSCARQ8IYS5 282 aa21.24■□□□□ 0.99
SRPRA-203ENST00000528744 TRIM41Q8WV44 630 aa21.24■□□□□ 0.99
SRPRA-203ENST00000528744 ZNF608Q9ULD9 1512 aaPredicted RBP21.23■□□□□ 0.99
SRPRA-203ENST00000528744 TOPBP1Q92547 1522 aa21.2■□□□□ 0.98
SRPRA-203ENST00000528744 IFT140Q96RY7 1462 aa21.15■□□□□ 0.98
SRPRA-203ENST00000528744 PRDM2Q13029 1718 aa21.12■□□□□ 0.97
SRPRA-203ENST00000528744 ABCC8Q09428 1581 aa21.07■□□□□ 0.96
SRPRA-203ENST00000528744 SUPT5HO00267 1087 aaKnown RBP21.07■□□□□ 0.96
SRPRA-203ENST00000528744 AQRO60306 1485 aaKnown RBP eCLIP21.07■□□□□ 0.963e-6■■□□□ 12.3
SRPRA-203ENST00000528744 DNMBPQ6XZF7 1577 aa21.06■□□□□ 0.96
SRPRA-203ENST00000528744 POLA1P09884 1462 aaPredicted RBP21.01■□□□□ 0.95
SRPRA-203ENST00000528744 RAD54L2Q9Y4B4 1467 aa21.01■□□□□ 0.95
SRPRA-203ENST00000528744 TARBP1Q13395 1621 aaKnown RBP20.97■□□□□ 0.95
SRPRA-203ENST00000528744 TDRD9Q8NDG6 1382 aaKnown RBP20.97■□□□□ 0.95
SRPRA-203ENST00000528744 SOGA1O94964 1423 aa20.95■□□□□ 0.95
SRPRA-203ENST00000528744 EIF4G3O43432 1585 aaKnown RBP20.93■□□□□ 0.94
SRPRA-203ENST00000528744 CUX1P39880 1505 aa20.9■□□□□ 0.94
SRPRA-203ENST00000528744 FBLN2P98095 1184 aa20.9■□□□□ 0.94
SRPRA-203ENST00000528744 FGD5Q6ZNL6 1462 aa20.88■□□□□ 0.93
SRPRA-203ENST00000528744 RIMBP3CA6NJZ7 1639 aa20.82■□□□□ 0.92
SRPRA-203ENST00000528744 RIMBP3BA6NNM3 1639 aa20.82■□□□□ 0.92
SRPRA-203ENST00000528744 RIMBP3Q9UFD9 1639 aa20.82■□□□□ 0.92
SRPRA-203ENST00000528744 ARHGEF11O15085 1522 aa20.8■□□□□ 0.92
SRPRA-203ENST00000528744 CYB5RLQ6IPT4 315 aa20.8■□□□□ 0.92
SRPRA-203ENST00000528744 SNAPC4Q5SXM2 1469 aa20.75■□□□□ 0.91
SRPRA-203ENST00000528744 CHMP7Q8WUX9 453 aaPredicted RBP20.73■□□□□ 0.91
SRPRA-203ENST00000528744 CHD1O14646 1710 aa20.72■□□□□ 0.91
SRPRA-203ENST00000528744 GRIN2BQ13224 1484 aa20.69■□□□□ 0.9
SRPRA-203ENST00000528744 GAPVD1Q14C86 1478 aa20.65■□□□□ 0.9
SRPRA-203ENST00000528744 ARAP1Q96P48 1450 aa20.65■□□□□ 0.9
SRPRA-203ENST00000528744 ABCA10Q8WWZ4 1543 aa20.63■□□□□ 0.89
SRPRA-203ENST00000528744 MAGI1Q96QZ7 1491 aaPredicted RBP20.63■□□□□ 0.89
SRPRA-203ENST00000528744 WDR97A6NE52 1622 aa20.6■□□□□ 0.89
SRPRA-203ENST00000528744 SYNJ2O15056 1496 aa20.6■□□□□ 0.89
SRPRA-203ENST00000528744 CLASP1Q7Z460 1538 aa20.58■□□□□ 0.89
SRPRA-203ENST00000528744 WRNQ14191 1432 aaPredicted RBP eCLIP20.57■□□□□ 0.88
SRPRA-203ENST00000528744 SYNJ1O43426 1573 aa20.53■□□□□ 0.88
SRPRA-203ENST00000528744 ABCA5Q8WWZ7 1642 aa20.52■□□□□ 0.88
SRPRA-203ENST00000528744 TOP2BQ02880 1626 aa20.49■□□□□ 0.87
SRPRA-203ENST00000528744 TRHP20396 242 aaPredicted RBP20.47■□□□□ 0.87
SRPRA-203ENST00000528744 PBRM1Q86U86 1689 aa20.46■□□□□ 0.87
SRPRA-203ENST00000528744 BIVM-ERCC5R4GMW8 1640 aa20.45■□□□□ 0.86
SRPRA-203ENST00000528744 GRIN2AQ12879 1464 aa20.43■□□□□ 0.86
SRPRA-203ENST00000528744 FHAD1B1AJZ9 1412 aa20.39■□□□□ 0.85
SRPRA-203ENST00000528744 NUP160Q12769 1436 aa20.39■□□□□ 0.85
SRPRA-203ENST00000528744 ERCC6L2Q5T890 1561 aa20.38■□□□□ 0.85
SRPRA-203ENST00000528744 ADAMTS12P58397 1594 aa20.36■□□□□ 0.85
SRPRA-203ENST00000528744 CEP170Q5SW79 1584 aa20.35■□□□□ 0.85
SRPRA-203ENST00000528744 ERICH3Q5RHP9 1530 aa20.32■□□□□ 0.84
SRPRA-203ENST00000528744 JPH4Q96JJ6 628 aa20.29■□□□□ 0.84
SRPRA-203ENST00000528744 IGF1RP08069 1367 aa20.29■□□□□ 0.84
SRPRA-203ENST00000528744 PHF23Q9BUL5 403 aaPredicted RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms