RNA–Protein interactions for RNA: ENST00000527900.1

CHD7-206, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-206ENST00000527900 IGF1RP08069 1367 aa14.95□□□□□ -0.02
CHD7-206ENST00000527900 JPH4Q96JJ6 628 aa14.92□□□□□ -0.02
CHD7-206ENST00000527900 KIF27Q86VH2 1401 aa14.9□□□□□ -0.02
CHD7-206ENST00000527900 RUSC2Q8N2Y8 1516 aa14.89□□□□□ -0.03
CHD7-206ENST00000527900 PRG4Q92954 1404 aaPredicted RBP14.89□□□□□ -0.03
CHD7-206ENST00000527900 CUL7Q14999 1698 aa14.86□□□□□ -0.03
CHD7-206ENST00000527900 KIAA0586Q9BVV6 1533 aa14.84□□□□□ -0.03
CHD7-206ENST00000527900 CARMIL1Q5VZK9 1371 aa14.81□□□□□ -0.04
CHD7-206ENST00000527900 KIF13AQ9H1H9 1805 aa14.75□□□□□ -0.05
CHD7-206ENST00000527900 ADCY10Q96PN6 1610 aa14.74□□□□□ -0.05
CHD7-206ENST00000527900 MAPKBP1O60336 1514 aa14.7□□□□□ -0.06
CHD7-206ENST00000527900 ABCC10Q5T3U5 1492 aa14.68□□□□□ -0.06
CHD7-206ENST00000527900 RAPGEF2Q9Y4G8 1499 aa14.68□□□□□ -0.06
CHD7-206ENST00000527900 IQGAP2Q13576 1575 aa14.68□□□□□ -0.06
CHD7-206ENST00000527900 PTPRGP23470 1445 aa14.66□□□□□ -0.06
CHD7-206ENST00000527900 NPM1P06748 294 aaKnown RBP eCLIP14.66□□□□□ -0.06
CHD7-206ENST00000527900 TNIKQ9UKE5 1360 aa14.65□□□□□ -0.06
CHD7-206ENST00000527900 DISP1Q96F81 1524 aa14.65□□□□□ -0.06
CHD7-206ENST00000527900 CARMIL2Q6F5E8 1435 aa14.65□□□□□ -0.06
CHD7-206ENST00000527900 DIP2BQ9P265 1576 aa14.64□□□□□ -0.07
CHD7-206ENST00000527900 UGGT2Q9NYU1 1516 aa14.63□□□□□ -0.07
CHD7-206ENST00000527900 FAM69CQ0P6D2 419 aa14.63□□□□□ -0.07
CHD7-206ENST00000527900 UHRF1BP1LA0JNW5 1464 aa14.6□□□□□ -0.07
CHD7-206ENST00000527900 ABCC2Q92887 1545 aa14.59□□□□□ -0.07
CHD7-206ENST00000527900 PRXQ9BXM0 1461 aa14.58□□□□□ -0.08
CHD7-206ENST00000527900 UACAQ9BZF9 1416 aa14.57□□□□□ -0.08
CHD7-206ENST00000527900 KIAA0556O60303 1618 aa14.55□□□□□ -0.08
CHD7-206ENST00000527900 CTTNBP2Q8WZ74 1663 aa14.55□□□□□ -0.08
CHD7-206ENST00000527900 TTBK1Q5TCY1 1321 aaPredicted RBP14.54□□□□□ -0.08
CHD7-206ENST00000527900 KDM5BQ9UGL1 1544 aa14.53□□□□□ -0.08
CHD7-206ENST00000527900 ASXL2Q76L83 1435 aa14.52□□□□□ -0.08
CHD7-206ENST00000527900 PLB1Q6P1J6 1458 aa14.51□□□□□ -0.09
CHD7-206ENST00000527900 GLI2P10070 1586 aa14.51□□□□□ -0.09
CHD7-206ENST00000527900 TSPOAP1O95153 1857 aa14.5□□□□□ -0.09
CHD7-206ENST00000527900 PPRC1Q5VV67 1664 aaKnown RBP14.48□□□□□ -0.09
CHD7-206ENST00000527900 GOLGA3Q08378 1498 aa14.47□□□□□ -0.09
CHD7-206ENST00000527900 ZCCHC11Q5TAX3 1644 aaKnown RBP14.47□□□□□ -0.09
CHD7-206ENST00000527900 CSRNP3Q8WYN3 585 aa14.46□□□□□ -0.09
CHD7-206ENST00000527900 KDM6BO15054 1643 aa14.45□□□□□ -0.1
CHD7-206ENST00000527900 EPRSP07814 1512 aaKnown RBP14.45□□□□□ -0.1
CHD7-206ENST00000527900 ABCA8O94911 1581 aa14.44□□□□□ -0.1
CHD7-206ENST00000527900 MAP3K4Q9Y6R4 1608 aa14.42□□□□□ -0.1
CHD7-206ENST00000527900 EEA1Q15075 1411 aa14.4□□□□□ -0.1
CHD7-206ENST00000527900 COL17A1Q9UMD9 1497 aaPredicted RBP14.38□□□□□ -0.11
CHD7-206ENST00000527900 WDR7Q9Y4E6 1490 aa14.38□□□□□ -0.11
CHD7-206ENST00000527900 SAMD9Q5K651 1589 aa14.37□□□□□ -0.11
CHD7-206ENST00000527900 KDM4FA0A1W2PPD8 638 aa14.34□□□□□ -0.11
CHD7-206ENST00000527900 ATP10BO94823 1461 aa14.33□□□□□ -0.12
CHD7-206ENST00000527900 P3H3Q8IVL6 736 aa14.33□□□□□ -0.12
CHD7-206ENST00000527900 TEX14Q8IWB6 1497 aa14.32□□□□□ -0.12
CHD7-206ENST00000527900 MAGI3Q5TCQ9 1506 aa14.31□□□□□ -0.12
CHD7-206ENST00000527900 CFAP43Q8NDM7 1665 aa14.31□□□□□ -0.12
CHD7-206ENST00000527900 FOXD1Q16676 465 aa14.3□□□□□ -0.12
CHD7-206ENST00000527900 KCNH8Q96L42 1107 aa14.29□□□□□ -0.12
CHD7-206ENST00000527900 CD109Q6YHK3 1445 aa14.29□□□□□ -0.12
CHD7-206ENST00000527900 KIF21BO75037 1637 aa14.29□□□□□ -0.12
CHD7-206ENST00000527900 RAPGEF6Q8TEU7 1601 aa14.27□□□□□ -0.12
CHD7-206ENST00000527900 FAM9AQ8IZU1 332 aaPredicted RBP14.27□□□□□ -0.13
CHD7-206ENST00000527900 NUP153P49790 1475 aaKnown RBP14.24□□□□□ -0.13
CHD7-206ENST00000527900 ABCA9Q8IUA7 1624 aa14.23□□□□□ -0.13
CHD7-206ENST00000527900 ARID3CA6NKF2 412 aa14.23□□□□□ -0.13
CHD7-206ENST00000527900 FHOD3Q2V2M9 1422 aa14.23□□□□□ -0.13
CHD7-206ENST00000527900 EFCAB5A4FU69 1503 aa14.2□□□□□ -0.14
CHD7-206ENST00000527900 ARAP3Q8WWN8 1544 aa14.2□□□□□ -0.14
CHD7-206ENST00000527900 RANGAP1P46060 587 aaPredicted RBP14.19□□□□□ -0.14
CHD7-206ENST00000527900 ADGRL1O94910 1474 aa14.18□□□□□ -0.14
CHD7-206ENST00000527900 PHLDB1Q86UU1 1377 aa14.17□□□□□ -0.14
CHD7-206ENST00000527900 NEO1Q92859 1461 aa14.13□□□□□ -0.15
CHD7-206ENST00000527900 PLEKHD1A6NEE1 506 aa14.13□□□□□ -0.15
CHD7-206ENST00000527900 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.13□□□□□ -0.15
CHD7-206ENST00000527900 HNRNPUL2Q1KMD3 747 aaKnown RBP14.13□□□□□ -0.15
CHD7-206ENST00000527900 UBTFP17480 764 aaKnown RBP14.12□□□□□ -0.15
CHD7-206ENST00000527900 ARHGAP35Q9NRY4 1499 aa14.12□□□□□ -0.15
CHD7-206ENST00000527900 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.1□□□□□ -0.15
CHD7-206ENST00000527900 RAPGEF3O95398 923 aa14.09□□□□□ -0.15
CHD7-206ENST00000527900 FRMPD1Q5SYB0 1578 aa14.09□□□□□ -0.15
CHD7-206ENST00000527900 EHMT2Q96KQ7 1210 aa14.08□□□□□ -0.16
CHD7-206ENST00000527900 CDK13Q14004 1512 aaKnown RBP14.08□□□□□ -0.16
CHD7-206ENST00000527900 FMN1Q68DA7 1419 aa14.07□□□□□ -0.16
CHD7-206ENST00000527900 TTC37Q6PGP7 1564 aa14.05□□□□□ -0.16
CHD7-206ENST00000527900 AKNAQ7Z591 1439 aa14.05□□□□□ -0.16
CHD7-206ENST00000527900 RICTORQ6R327 1708 aa14.04□□□□□ -0.16
CHD7-206ENST00000527900 FANCAO15360 1455 aa14.04□□□□□ -0.16
CHD7-206ENST00000527900 HECW1Q76N89 1606 aa14.03□□□□□ -0.16
CHD7-206ENST00000527900 LRRIQ1Q96JM4 1722 aa14.02□□□□□ -0.16
CHD7-206ENST00000527900 PLCH2O75038 1416 aa14.02□□□□□ -0.16
CHD7-206ENST00000527900 ADAMTSL3P82987 1691 aa14.01□□□□□ -0.17
CHD7-206ENST00000527900 CFAP74Q9C0B2 1584 aa14.01□□□□□ -0.17
CHD7-206ENST00000527900 DENND4BO75064 1496 aaPredicted RBP14.01□□□□□ -0.17
CHD7-206ENST00000527900 ZMYM4Q5VZL5 1548 aa13.98□□□□□ -0.17
CHD7-206ENST00000527900 HECW2Q9P2P5 1572 aa13.97□□□□□ -0.17
CHD7-206ENST00000527900 ARHGEF40Q8TER5 1519 aa13.97□□□□□ -0.17
CHD7-206ENST00000527900 ATP1B4Q9UN42 357 aaPredicted RBP13.97□□□□□ -0.17
CHD7-206ENST00000527900 CDK11AQ9UQ88 783 aaPredicted RBP13.97□□□□□ -0.17
CHD7-206ENST00000527900 BCORL1Q5H9F3 1711 aa13.97□□□□□ -0.17
CHD7-206ENST00000527900 TROQ12816 1431 aaPredicted RBP13.97□□□□□ -0.17
CHD7-206ENST00000527900 KIF14Q15058 1648 aa13.97□□□□□ -0.17
CHD7-206ENST00000527900 MYO5CQ9NQX4 1742 aa13.95□□□□□ -0.18
CHD7-206ENST00000527900 CASKIN1Q8WXD9 1431 aa13.95□□□□□ -0.18
CHD7-206ENST00000527900 PTPRMP28827 1452 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms