RNA–Protein interactions for RNA: ENST00000527875.1

FOXRED1-208, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 3

Gene FOXRED1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-208ENST00000527875 CTTNBP2Q8WZ74 1663 aa28.39■■■□□ 2.14
FOXRED1-208ENST00000527875 SHROOM2Q13796 1616 aa28.38■■■□□ 2.13
FOXRED1-208ENST00000527875 RIMBP3CA6NJZ7 1639 aa28.36■■■□□ 2.13
FOXRED1-208ENST00000527875 RIMBP3BA6NNM3 1639 aa28.36■■■□□ 2.13
FOXRED1-208ENST00000527875 RIMBP3Q9UFD9 1639 aa28.36■■■□□ 2.13
FOXRED1-208ENST00000527875 ARHGEF11O15085 1522 aa28.35■■■□□ 2.13
FOXRED1-208ENST00000527875 IQGAP2Q13576 1575 aa28.34■■■□□ 2.13
FOXRED1-208ENST00000527875 JPH4Q96JJ6 628 aa28.3■■■□□ 2.12
FOXRED1-208ENST00000527875 EHMT2Q96KQ7 1210 aa28.28■■■□□ 2.12
FOXRED1-208ENST00000527875 GOLGA3Q08378 1498 aa28.27■■■□□ 2.12
FOXRED1-208ENST00000527875 ERCC6L2Q5T890 1561 aa28.26■■■□□ 2.11
FOXRED1-208ENST00000527875 PRG4Q92954 1404 aaPredicted RBP28.24■■■□□ 2.11
FOXRED1-208ENST00000527875 UGGT2Q9NYU1 1516 aa28.18■■■□□ 2.1
FOXRED1-208ENST00000527875 UBTFP17480 764 aaKnown RBP28.16■■■□□ 2.1
FOXRED1-208ENST00000527875 ARAP1Q96P48 1450 aa28.15■■■□□ 2.1
FOXRED1-208ENST00000527875 DISP1Q96F81 1524 aa28.1■■■□□ 2.09
FOXRED1-208ENST00000527875 CARMIL2Q6F5E8 1435 aa28.09■■■□□ 2.09
FOXRED1-208ENST00000527875 KIAA0556O60303 1618 aa28.07■■■□□ 2.08
FOXRED1-208ENST00000527875 CYB5RLQ6IPT4 315 aa28.05■■■□□ 2.08
FOXRED1-208ENST00000527875 RANGAP1P46060 587 aaPredicted RBP28.02■■■□□ 2.08
FOXRED1-208ENST00000527875 SAMD9Q5K651 1589 aa27.99■■■□□ 2.07
FOXRED1-208ENST00000527875 TNIKQ9UKE5 1360 aa27.98■■■□□ 2.07
FOXRED1-208ENST00000527875 TTBK1Q5TCY1 1321 aaPredicted RBP27.94■■■□□ 2.06
FOXRED1-208ENST00000527875 LOC105371045A0A1W2PR82 267 aa27.94■■■□□ 2.06
FOXRED1-208ENST00000527875 PTPRGP23470 1445 aa27.93■■■□□ 2.06
FOXRED1-208ENST00000527875 P3H3Q8IVL6 736 aa27.92■■■□□ 2.06
FOXRED1-208ENST00000527875 EFCAB5A4FU69 1503 aa27.92■■■□□ 2.06
FOXRED1-208ENST00000527875 FHOD3Q2V2M9 1422 aa27.84■■■□□ 2.05
FOXRED1-208ENST00000527875 ARHGAP35Q9NRY4 1499 aa27.83■■■□□ 2.05
FOXRED1-208ENST00000527875 ADCY10Q96PN6 1610 aa27.81■■■□□ 2.04
FOXRED1-208ENST00000527875 CLIP1P30622 1438 aa27.77■■■□□ 2.04
FOXRED1-208ENST00000527875 UACAQ9BZF9 1416 aa27.76■■■□□ 2.04
FOXRED1-208ENST00000527875 PLB1Q6P1J6 1458 aa27.74■■■□□ 2.03
FOXRED1-208ENST00000527875 ABCA8O94911 1581 aa27.73■■■□□ 2.03
FOXRED1-208ENST00000527875 ABCC2Q92887 1545 aa27.73■■■□□ 2.03
FOXRED1-208ENST00000527875 CEP162Q5TB80 1403 aa27.73■■■□□ 2.03
FOXRED1-208ENST00000527875 UHRF1BP1LA0JNW5 1464 aa27.71■■■□□ 2.03
FOXRED1-208ENST00000527875 RAPGEF6Q8TEU7 1601 aa27.67■■■□□ 2.02
FOXRED1-208ENST00000527875 FMN1Q68DA7 1419 aa27.63■■■□□ 2.01
FOXRED1-208ENST00000527875 NPM1P06748 294 aaKnown RBP eCLIP27.62■■■□□ 2.01
FOXRED1-208ENST00000527875 ZCCHC11Q5TAX3 1644 aaKnown RBP27.59■■■□□ 2.01
FOXRED1-208ENST00000527875 KDM5BQ9UGL1 1544 aa27.59■■■□□ 2.01
FOXRED1-208ENST00000527875 NUP153P49790 1475 aaKnown RBP27.54■■■□□ 2
FOXRED1-208ENST00000527875 MAPKBP1O60336 1514 aa27.52■■■□□ 2
FOXRED1-208ENST00000527875 PCF11O94913 1555 aaKnown RBP27.52■■■□□ 2
FOXRED1-208ENST00000527875 ARID3CA6NKF2 412 aa27.51■■□□□ 1.99
FOXRED1-208ENST00000527875 HECW1Q76N89 1606 aa27.51■■□□□ 1.99
FOXRED1-208ENST00000527875 ATP10BO94823 1461 aa27.49■■□□□ 1.99
FOXRED1-208ENST00000527875 ATP1B4Q9UN42 357 aaPredicted RBP27.47■■□□□ 1.99
FOXRED1-208ENST00000527875 CASKIN1Q8WXD9 1431 aa27.46■■□□□ 1.99
FOXRED1-208ENST00000527875 LRRIQ1Q96JM4 1722 aa27.45■■□□□ 1.99
FOXRED1-208ENST00000527875 ASXL2Q76L83 1435 aa27.45■■□□□ 1.98
FOXRED1-208ENST00000527875 FYCO1Q9BQS8 1478 aa27.43■■□□□ 1.98
FOXRED1-208ENST00000527875 CDK13Q14004 1512 aaKnown RBP27.41■■□□□ 1.98
FOXRED1-208ENST00000527875 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.4■■□□□ 1.98
FOXRED1-208ENST00000527875 HNRNPUL2Q1KMD3 747 aaKnown RBP27.4■■□□□ 1.98
FOXRED1-208ENST00000527875 EPRSP07814 1512 aaKnown RBP27.4■■□□□ 1.98
FOXRED1-208ENST00000527875 TRHP20396 242 aaPredicted RBP27.38■■□□□ 1.97
FOXRED1-208ENST00000527875 KIF13AQ9H1H9 1805 aa27.37■■□□□ 1.97
FOXRED1-208ENST00000527875 VPS8Q8N3P4 1428 aa27.37■■□□□ 1.97
FOXRED1-208ENST00000527875 WDR7Q9Y4E6 1490 aa27.37■■□□□ 1.97
FOXRED1-208ENST00000527875 DIP2BQ9P265 1576 aa27.35■■□□□ 1.97
FOXRED1-208ENST00000527875 ABCC10Q5T3U5 1492 aa27.35■■□□□ 1.97
FOXRED1-208ENST00000527875 CCDC18Q5T9S5 1454 aa27.32■■□□□ 1.96
FOXRED1-208ENST00000527875 FAM69CQ0P6D2 419 aa27.28■■□□□ 1.96
FOXRED1-208ENST00000527875 PLEKHD1A6NEE1 506 aa27.26■■□□□ 1.95
FOXRED1-208ENST00000527875 KCNH8Q96L42 1107 aa27.26■■□□□ 1.95
FOXRED1-208ENST00000527875 GLI2P10070 1586 aa27.25■■□□□ 1.95
FOXRED1-208ENST00000527875 CDK11AQ9UQ88 783 aaPredicted RBP27.22■■□□□ 1.95
FOXRED1-208ENST00000527875 CFAP43Q8NDM7 1665 aa27.2■■□□□ 1.94
FOXRED1-208ENST00000527875 TSPOAP1O95153 1857 aa27.18■■□□□ 1.94
FOXRED1-208ENST00000527875 MAGI3Q5TCQ9 1506 aa27.17■■□□□ 1.94
FOXRED1-208ENST00000527875 MAP3K4Q9Y6R4 1608 aa27.17■■□□□ 1.94
FOXRED1-208ENST00000527875 TROQ12816 1431 aaPredicted RBP27.16■■□□□ 1.94
FOXRED1-208ENST00000527875 TIAM1Q13009 1591 aa27.15■■□□□ 1.94
FOXRED1-208ENST00000527875 ABCA9Q8IUA7 1624 aa27.14■■□□□ 1.94
FOXRED1-208ENST00000527875 KIF14Q15058 1648 aa27.12■■□□□ 1.93
FOXRED1-208ENST00000527875 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.1■■□□□ 1.93
FOXRED1-208ENST00000527875 PPRC1Q5VV67 1664 aaKnown RBP27.09■■□□□ 1.93
FOXRED1-208ENST00000527875 MAP3K1Q13233 1512 aa27.08■■□□□ 1.93
FOXRED1-208ENST00000527875 TTC37Q6PGP7 1564 aa27.08■■□□□ 1.93
FOXRED1-208ENST00000527875 MTUS2Q5JR59 1369 aa27.08■■□□□ 1.93
FOXRED1-208ENST00000527875 CD109Q6YHK3 1445 aa27.07■■□□□ 1.92
FOXRED1-208ENST00000527875 EHBP1L1Q8N3D4 1523 aa27.06■■□□□ 1.92
FOXRED1-208ENST00000527875 APLP2Q06481 763 aa27.04■■□□□ 1.92
FOXRED1-208ENST00000527875 LRRC9Q6ZRR7 1453 aa27■■□□□ 1.91
FOXRED1-208ENST00000527875 MYO5CQ9NQX4 1742 aa26.99■■□□□ 1.91
FOXRED1-208ENST00000527875 KANK4Q5T7N3 995 aaPredicted RBP26.97■■□□□ 1.91
FOXRED1-208ENST00000527875 TEX14Q8IWB6 1497 aa26.97■■□□□ 1.91
FOXRED1-208ENST00000527875 SUPT6HQ7KZ85 1726 aaKnown RBP26.96■■□□□ 1.91
FOXRED1-208ENST00000527875 CDC42BPAQ5VT25 1732 aa26.93■■□□□ 1.9
FOXRED1-208ENST00000527875 PLCH2O75038 1416 aa26.9■■□□□ 1.9
FOXRED1-208ENST00000527875 CDC42BPBQ9Y5S2 1711 aa26.9■■□□□ 1.9
FOXRED1-208ENST00000527875 PREX2Q70Z35 1606 aa26.9■■□□□ 1.9
FOXRED1-208ENST00000527875 NCOA2Q15596 1464 aa26.88■■□□□ 1.89
FOXRED1-208ENST00000527875 ARAP3Q8WWN8 1544 aa26.87■■□□□ 1.89
FOXRED1-208ENST00000527875 CFAP74Q9C0B2 1584 aa26.87■■□□□ 1.89
FOXRED1-208ENST00000527875 FANCAO15360 1455 aa26.86■■□□□ 1.89
FOXRED1-208ENST00000527875 ARHGAP5Q13017 1502 aa26.85■■□□□ 1.89
FOXRED1-208ENST00000527875 CCNB3Q8WWL7 1395 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms