RNA–Protein interactions for RNA: ENST00000527875.1

FOXRED1-208, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 3

Gene FOXRED1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-208ENST00000527875 NISCHQ9Y2I1 1504 aa41.19■■■■■ 4.18
FOXRED1-208ENST00000527875 CCDC180Q9P1Z9 1646 aa36.5■■■■□ 3.43
FOXRED1-208ENST00000527875 ABCC9O60706 1549 aa35.37■■■■□ 3.25
FOXRED1-208ENST00000527875 ZCCHC6Q5VYS8 1495 aaKnown RBP34.39■■■■□ 3.1
FOXRED1-208ENST00000527875 DCAF8L2P0C7V8 631 aa34.28■■■■□ 3.08
FOXRED1-208ENST00000527875 NACADO15069 1562 aa34.2■■■■□ 3.07
FOXRED1-208ENST00000527875 RB1CC1Q8TDY2 1594 aa34.17■■■■□ 3.06
FOXRED1-208ENST00000527875 MYO15BQ96JP2 1530 aa34.08■■■■□ 3.05
FOXRED1-208ENST00000527875 DCAF1Q9Y4B6 1507 aa34.08■■■■□ 3.05
FOXRED1-208ENST00000527875 UNC13AQ9UPW8 1703 aa33.49■■■□□ 2.95
FOXRED1-208ENST00000527875 SCRIBQ14160 1630 aa33.35■■■□□ 2.93
FOXRED1-208ENST00000527875 BICRAQ9NZM4 1560 aa33.13■■■□□ 2.89
FOXRED1-208ENST00000527875 PABPN1Q86U42 306 aaKnown RBP eCLIP33.09■■■□□ 2.89
FOXRED1-208ENST00000527875 SHROOM4Q9ULL8 1493 aa32.78■■■□□ 2.84
FOXRED1-208ENST00000527875 EIF4G1Q04637 1599 aaKnown RBP32.23■■■□□ 2.75
FOXRED1-208ENST00000527875 DNAJC5BQ9UF47 199 aa32.12■■■□□ 2.73
FOXRED1-208ENST00000527875 CECR2Q9BXF3 1484 aa32.06■■■□□ 2.72
FOXRED1-208ENST00000527875 CC2D2AQ9P2K1 1620 aa32.02■■■□□ 2.72
FOXRED1-208ENST00000527875 SMARCA4P51532 1647 aa31.92■■■□□ 2.7
FOXRED1-208ENST00000527875 BAZ1AQ9NRL2 1556 aaPredicted RBP31.9■■■□□ 2.7
FOXRED1-208ENST00000527875 MROH2BQ7Z745 1585 aa31.77■■■□□ 2.68
FOXRED1-208ENST00000527875 ATAD2BQ9ULI0 1458 aa31.62■■■□□ 2.65
FOXRED1-208ENST00000527875 SMARCA2P51531 1590 aa31.61■■■□□ 2.65
FOXRED1-208ENST00000527875 PEG3Q9GZU2 1588 aa31.57■■■□□ 2.64
FOXRED1-208ENST00000527875 NCAPD3P42695 1498 aa31.52■■■□□ 2.64
FOXRED1-208ENST00000527875 RSF1Q96T23 1441 aaPredicted RBP31.5■■■□□ 2.63
FOXRED1-208ENST00000527875 WIZO95785 1651 aa31.48■■■□□ 2.63
FOXRED1-208ENST00000527875 HMGXB3Q12766 1538 aa31.44■■■□□ 2.62
FOXRED1-208ENST00000527875 BAZ1BQ9UIG0 1483 aaKnown RBP31.4■■■□□ 2.62
FOXRED1-208ENST00000527875 TOP2AP11388 1531 aaKnown RBP31.13■■■□□ 2.57
FOXRED1-208ENST00000527875 SUPT5HO00267 1087 aaKnown RBP30.99■■■□□ 2.55
FOXRED1-208ENST00000527875 CCDC88BA6NC98 1476 aa30.76■■■□□ 2.51
FOXRED1-208ENST00000527875 NESP48681 1621 aa30.72■■■□□ 2.51
FOXRED1-208ENST00000527875 LAMC3Q9Y6N6 1575 aa30.68■■■□□ 2.5
FOXRED1-208ENST00000527875 CADPSQ9ULU8 1353 aa30.63■■■□□ 2.49
FOXRED1-208ENST00000527875 CFTRP13569 1480 aa30.53■■■□□ 2.48
FOXRED1-208ENST00000527875 ERCC6Q03468 1493 aa30.44■■■□□ 2.46
FOXRED1-208ENST00000527875 PRDM2Q13029 1718 aa30.44■■■□□ 2.46
FOXRED1-208ENST00000527875 PDS5BQ9NTI5 1447 aa30.43■■■□□ 2.46
FOXRED1-208ENST00000527875 KIF21AQ7Z4S6 1674 aa30.42■■■□□ 2.46
FOXRED1-208ENST00000527875 FANCD2Q9BXW9 1451 aa30.31■■■□□ 2.44
FOXRED1-208ENST00000527875 CEP164Q9UPV0 1460 aa30.24■■■□□ 2.43
FOXRED1-208ENST00000527875 THOC2Q8NI27 1593 aaKnown RBP30.19■■■□□ 2.42
FOXRED1-208ENST00000527875 MRC2Q9UBG0 1479 aa30.12■■■□□ 2.41
FOXRED1-208ENST00000527875 WDR62O43379 1518 aa30.01■■■□□ 2.4
FOXRED1-208ENST00000527875 URB2Q14146 1524 aaKnown RBP29.99■■■□□ 2.39
FOXRED1-208ENST00000527875 CUX2O14529 1486 aa29.98■■■□□ 2.39
FOXRED1-208ENST00000527875 TOPBP1Q92547 1522 aa29.87■■■□□ 2.37
FOXRED1-208ENST00000527875 DNMBPQ6XZF7 1577 aa29.87■■■□□ 2.37
FOXRED1-208ENST00000527875 ABCC8Q09428 1581 aa29.86■■■□□ 2.37
FOXRED1-208ENST00000527875 CUX1P39880 1505 aa29.78■■■□□ 2.36
FOXRED1-208ENST00000527875 WRNQ14191 1432 aaPredicted RBP eCLIP29.7■■■□□ 2.34
FOXRED1-208ENST00000527875 SYNJ1O43426 1573 aa29.65■■■□□ 2.34
FOXRED1-208ENST00000527875 BIVM-ERCC5R4GMW8 1640 aa29.64■■■□□ 2.34
FOXRED1-208ENST00000527875 POLA1P09884 1462 aaPredicted RBP29.63■■■□□ 2.33
FOXRED1-208ENST00000527875 FGD5Q6ZNL6 1462 aa29.62■■■□□ 2.33
FOXRED1-208ENST00000527875 TOP2BQ02880 1626 aa29.62■■■□□ 2.33
FOXRED1-208ENST00000527875 IFT140Q96RY7 1462 aa29.57■■■□□ 2.32
FOXRED1-208ENST00000527875 TARBP1Q13395 1621 aaKnown RBP29.54■■■□□ 2.32
FOXRED1-208ENST00000527875 RAD54L2Q9Y4B4 1467 aa29.51■■■□□ 2.31
FOXRED1-208ENST00000527875 SOGA1O94964 1423 aa29.51■■■□□ 2.31
FOXRED1-208ENST00000527875 ZNF608Q9ULD9 1512 aaPredicted RBP29.43■■■□□ 2.3
FOXRED1-208ENST00000527875 DNAJC5Q9H3Z4 198 aa29.41■■■□□ 2.3
FOXRED1-208ENST00000527875 WDR97A6NE52 1622 aa29.41■■■□□ 2.3
FOXRED1-208ENST00000527875 EIF4G3O43432 1585 aaKnown RBP29.36■■■□□ 2.29
FOXRED1-208ENST00000527875 ABCA10Q8WWZ4 1543 aa29.34■■■□□ 2.29
FOXRED1-208ENST00000527875 AQRO60306 1485 aaKnown RBP eCLIP29.3■■■□□ 2.287e-7■■■□□ 19.1
FOXRED1-208ENST00000527875 TDRD9Q8NDG6 1382 aaKnown RBP29.3■■■□□ 2.28
FOXRED1-208ENST00000527875 TRIM41Q8WV44 630 aa29.23■■■□□ 2.27
FOXRED1-208ENST00000527875 ABCA5Q8WWZ7 1642 aa29.22■■■□□ 2.27
FOXRED1-208ENST00000527875 GAPVD1Q14C86 1478 aa29.18■■■□□ 2.26
FOXRED1-208ENST00000527875 PBRM1Q86U86 1689 aa29.18■■■□□ 2.26
FOXRED1-208ENST00000527875 GRIN2BQ13224 1484 aa29.12■■■□□ 2.25
FOXRED1-208ENST00000527875 CHIC1Q5VXU3 224 aa29.11■■■□□ 2.25
FOXRED1-208ENST00000527875 SNAPC4Q5SXM2 1469 aa29.05■■■□□ 2.24
FOXRED1-208ENST00000527875 KIF27Q86VH2 1401 aa29.04■■■□□ 2.24
FOXRED1-208ENST00000527875 MAGI1Q96QZ7 1491 aaPredicted RBP29.01■■■□□ 2.23
FOXRED1-208ENST00000527875 ERICH3Q5RHP9 1530 aa28.99■■■□□ 2.23
FOXRED1-208ENST00000527875 CHD1O14646 1710 aa28.97■■■□□ 2.23
FOXRED1-208ENST00000527875 RUSC2Q8N2Y8 1516 aa28.93■■■□□ 2.22
FOXRED1-208ENST00000527875 ADAMTS12P58397 1594 aa28.92■■■□□ 2.22
FOXRED1-208ENST00000527875 SYNJ2O15056 1496 aa28.89■■■□□ 2.22
FOXRED1-208ENST00000527875 FBLN2P98095 1184 aa28.88■■■□□ 2.21
FOXRED1-208ENST00000527875 IGF1RP08069 1367 aa28.88■■■□□ 2.21
FOXRED1-208ENST00000527875 FHAD1B1AJZ9 1412 aa28.85■■■□□ 2.21
FOXRED1-208ENST00000527875 CHMP7Q8WUX9 453 aaPredicted RBP28.84■■■□□ 2.21
FOXRED1-208ENST00000527875 CUL7Q14999 1698 aa28.83■■■□□ 2.21
FOXRED1-208ENST00000527875 OSCARQ8IYS5 282 aa28.79■■■□□ 2.2
FOXRED1-208ENST00000527875 GRIN2AQ12879 1464 aa28.76■■■□□ 2.19
FOXRED1-208ENST00000527875 CARMIL1Q5VZK9 1371 aa28.73■■■□□ 2.19
FOXRED1-208ENST00000527875 EEA1Q15075 1411 aa28.71■■■□□ 2.19
FOXRED1-208ENST00000527875 FAM9AQ8IZU1 332 aaPredicted RBP28.65■■■□□ 2.18
FOXRED1-208ENST00000527875 CSRNP3Q8WYN3 585 aa28.63■■■□□ 2.17
FOXRED1-208ENST00000527875 CEP170Q5SW79 1584 aa28.62■■■□□ 2.17
FOXRED1-208ENST00000527875 NUP160Q12769 1436 aa28.6■■■□□ 2.17
FOXRED1-208ENST00000527875 RAPGEF2Q9Y4G8 1499 aa28.59■■■□□ 2.17
FOXRED1-208ENST00000527875 CLASP1Q7Z460 1538 aa28.59■■■□□ 2.17
FOXRED1-208ENST00000527875 PRXQ9BXM0 1461 aa28.58■■■□□ 2.17
FOXRED1-208ENST00000527875 KIF21BO75037 1637 aa28.43■■■□□ 2.14
FOXRED1-208ENST00000527875 KIAA0586Q9BVV6 1533 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms