RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 NPM1P06748 294 aaKnown RBP eCLIP22.1■■□□□ 1.13
SRPRA-202ENST00000527817 FAM69CQ0P6D2 419 aa22.1■■□□□ 1.13
SRPRA-202ENST00000527817 ABCC10Q5T3U5 1492 aa22.05■■□□□ 1.12
SRPRA-202ENST00000527817 MAPKBP1O60336 1514 aa21.98■■□□□ 1.11
SRPRA-202ENST00000527817 RUSC2Q8N2Y8 1516 aa21.95■■□□□ 1.1
SRPRA-202ENST00000527817 KIAA0586Q9BVV6 1533 aa21.91■■□□□ 1.1
SRPRA-202ENST00000527817 DIP2BQ9P265 1576 aa21.91■■□□□ 1.1
SRPRA-202ENST00000527817 KDM4FA0A1W2PPD8 638 aa21.9■■□□□ 1.1
SRPRA-202ENST00000527817 ADCY10Q96PN6 1610 aa21.9■■□□□ 1.1
SRPRA-202ENST00000527817 IGF1RP08069 1367 aa21.89■■□□□ 1.1
SRPRA-202ENST00000527817 KDM6BO15054 1643 aa21.82■■□□□ 1.08
SRPRA-202ENST00000527817 PTPRGP23470 1445 aa21.8■■□□□ 1.08
SRPRA-202ENST00000527817 KIF27Q86VH2 1401 aa21.79■■□□□ 1.08
SRPRA-202ENST00000527817 TSPOAP1O95153 1857 aa21.77■■□□□ 1.08
SRPRA-202ENST00000527817 CUL7Q14999 1698 aa21.74■■□□□ 1.07
SRPRA-202ENST00000527817 TNIKQ9UKE5 1360 aa21.73■■□□□ 1.07
SRPRA-202ENST00000527817 CARMIL1Q5VZK9 1371 aa21.72■■□□□ 1.07
SRPRA-202ENST00000527817 CARMIL2Q6F5E8 1435 aa21.71■■□□□ 1.07
SRPRA-202ENST00000527817 TTBK1Q5TCY1 1321 aaPredicted RBP21.7■■□□□ 1.06
SRPRA-202ENST00000527817 ABCC2Q92887 1545 aa21.7■■□□□ 1.06
SRPRA-202ENST00000527817 PLB1Q6P1J6 1458 aa21.69■■□□□ 1.06
SRPRA-202ENST00000527817 ASXL2Q76L83 1435 aa21.66■■□□□ 1.06
SRPRA-202ENST00000527817 GLI2P10070 1586 aa21.65■■□□□ 1.06
SRPRA-202ENST00000527817 UHRF1BP1LA0JNW5 1464 aa21.64■■□□□ 1.05
SRPRA-202ENST00000527817 ILDR1Q86SU0 546 aaPredicted RBP21.62■■□□□ 1.05
SRPRA-202ENST00000527817 UACAQ9BZF9 1416 aa21.6■■□□□ 1.05
SRPRA-202ENST00000527817 PPRC1Q5VV67 1664 aaKnown RBP21.58■■□□□ 1.05
SRPRA-202ENST00000527817 IQGAP2Q13576 1575 aa21.57■■□□□ 1.04
SRPRA-202ENST00000527817 COL17A1Q9UMD9 1497 aaPredicted RBP21.54■■□□□ 1.04
SRPRA-202ENST00000527817 ADGRL1O94910 1474 aa21.53■■□□□ 1.04
SRPRA-202ENST00000527817 EPRSP07814 1512 aaKnown RBP21.53■■□□□ 1.04
SRPRA-202ENST00000527817 DISP1Q96F81 1524 aa21.53■■□□□ 1.04
SRPRA-202ENST00000527817 KDM5BQ9UGL1 1544 aa21.53■■□□□ 1.04
SRPRA-202ENST00000527817 TEX14Q8IWB6 1497 aa21.48■■□□□ 1.03
SRPRA-202ENST00000527817 UGGT2Q9NYU1 1516 aa21.46■■□□□ 1.03
SRPRA-202ENST00000527817 MAP3K4Q9Y6R4 1608 aa21.46■■□□□ 1.03
SRPRA-202ENST00000527817 RAPGEF2Q9Y4G8 1499 aa21.44■■□□□ 1.02
SRPRA-202ENST00000527817 ZCCHC11Q5TAX3 1644 aaKnown RBP21.4■■□□□ 1.02
SRPRA-202ENST00000527817 WDR7Q9Y4E6 1490 aa21.37■■□□□ 1.01
SRPRA-202ENST00000527817 KIAA0556O60303 1618 aa21.37■■□□□ 1.01
SRPRA-202ENST00000527817 HECW2Q9P2P5 1572 aa21.34■■□□□ 1.01
SRPRA-202ENST00000527817 CD109Q6YHK3 1445 aa21.33■■□□□ 1.01
SRPRA-202ENST00000527817 KCNH8Q96L42 1107 aa21.32■■□□□ 1
SRPRA-202ENST00000527817 MAGI3Q5TCQ9 1506 aa21.32■■□□□ 1
SRPRA-202ENST00000527817 GOLGA3Q08378 1498 aa21.26■□□□□ 0.99
SRPRA-202ENST00000527817 CFAP43Q8NDM7 1665 aa21.24■□□□□ 0.99
SRPRA-202ENST00000527817 ABCA8O94911 1581 aa21.23■□□□□ 0.99
SRPRA-202ENST00000527817 FAM9AQ8IZU1 332 aaPredicted RBP21.19■□□□□ 0.98
SRPRA-202ENST00000527817 ARAP3Q8WWN8 1544 aa21.18■□□□□ 0.98
SRPRA-202ENST00000527817 CTTNBP2Q8WZ74 1663 aa21.17■□□□□ 0.98
SRPRA-202ENST00000527817 PHLDB1Q86UU1 1377 aa21.15■□□□□ 0.98
SRPRA-202ENST00000527817 FBXO41Q8TF61 875 aa21.13■□□□□ 0.97
SRPRA-202ENST00000527817 PRXQ9BXM0 1461 aa21.13■□□□□ 0.97
SRPRA-202ENST00000527817 ATP10BO94823 1461 aa21.11■□□□□ 0.97
SRPRA-202ENST00000527817 KIF21BO75037 1637 aa21.09■□□□□ 0.97
SRPRA-202ENST00000527817 P3H3Q8IVL6 736 aa21.07■□□□□ 0.96
SRPRA-202ENST00000527817 ARID3CA6NKF2 412 aa21.06■□□□□ 0.96
SRPRA-202ENST00000527817 RAPGEF3O95398 923 aa21.05■□□□□ 0.96
SRPRA-202ENST00000527817 PTPRMP28827 1452 aa21.04■□□□□ 0.96
SRPRA-202ENST00000527817 ADAMTSL3P82987 1691 aa21.02■□□□□ 0.96
SRPRA-202ENST00000527817 ABCA9Q8IUA7 1624 aa21.02■□□□□ 0.96
SRPRA-202ENST00000527817 NEO1Q92859 1461 aa21.01■□□□□ 0.95
SRPRA-202ENST00000527817 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.96■□□□□ 0.95
SRPRA-202ENST00000527817 HNRNPUL2Q1KMD3 747 aaKnown RBP20.96■□□□□ 0.95
SRPRA-202ENST00000527817 ARID4BQ4LE39 1312 aaPredicted RBP20.96■□□□□ 0.95
SRPRA-202ENST00000527817 CSRNP3Q8WYN3 585 aa20.92■□□□□ 0.94
SRPRA-202ENST00000527817 BCORL1Q5H9F3 1711 aa20.91■□□□□ 0.94
SRPRA-202ENST00000527817 RAPGEF6Q8TEU7 1601 aa20.9■□□□□ 0.94
SRPRA-202ENST00000527817 SAMD9Q5K651 1589 aa20.9■□□□□ 0.94
SRPRA-202ENST00000527817 PLEKHD1A6NEE1 506 aa20.89■□□□□ 0.93
SRPRA-202ENST00000527817 PCF11O94913 1555 aaKnown RBP20.87■□□□□ 0.93
SRPRA-202ENST00000527817 FRMPD1Q5SYB0 1578 aa20.87■□□□□ 0.93
SRPRA-202ENST00000527817 NUP153P49790 1475 aaKnown RBP20.86■□□□□ 0.93
SRPRA-202ENST00000527817 LMTK3Q96Q04 1460 aa20.86■□□□□ 0.93
SRPRA-202ENST00000527817 MADDQ8WXG6 1647 aa20.86■□□□□ 0.93
SRPRA-202ENST00000527817 DENND4BO75064 1496 aaPredicted RBP20.85■□□□□ 0.93
SRPRA-202ENST00000527817 AKNAQ7Z591 1439 aa20.84■□□□□ 0.93
SRPRA-202ENST00000527817 FHOD3Q2V2M9 1422 aa20.83■□□□□ 0.93
SRPRA-202ENST00000527817 POGZQ7Z3K3 1410 aa20.78■□□□□ 0.92
SRPRA-202ENST00000527817 ARHGEF40Q8TER5 1519 aa20.78■□□□□ 0.92
SRPRA-202ENST00000527817 FANCAO15360 1455 aa20.78■□□□□ 0.92
SRPRA-202ENST00000527817 HSPA2P54652 639 aa20.78■□□□□ 0.92
SRPRA-202ENST00000527817 RICTORQ6R327 1708 aa20.77■□□□□ 0.92
SRPRA-202ENST00000527817 RANGAP1P46060 587 aaPredicted RBP20.76■□□□□ 0.91
SRPRA-202ENST00000527817 RIMS1Q86UR5 1692 aaKnown RBP20.76■□□□□ 0.91
SRPRA-202ENST00000527817 MAGI2Q86UL8 1455 aa20.74■□□□□ 0.91
SRPRA-202ENST00000527817 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.73■□□□□ 0.91
SRPRA-202ENST00000527817 CFAP74Q9C0B2 1584 aa20.72■□□□□ 0.91
SRPRA-202ENST00000527817 PLPPR3Q6T4P5 718 aa20.72■□□□□ 0.91
SRPRA-202ENST00000527817 CERKQ8TCT0 537 aa20.72■□□□□ 0.91
SRPRA-202ENST00000527817 ZMYM4Q5VZL5 1548 aa20.72■□□□□ 0.91
SRPRA-202ENST00000527817 YEATS2Q9ULM3 1422 aa20.71■□□□□ 0.91
SRPRA-202ENST00000527817 EEA1Q15075 1411 aa20.7■□□□□ 0.9
SRPRA-202ENST00000527817 EFCAB5A4FU69 1503 aa20.69■□□□□ 0.9
SRPRA-202ENST00000527817 MLECQ14165 292 aa20.69■□□□□ 0.9
SRPRA-202ENST00000527817 ZFYVE16Q7Z3T8 1539 aa20.68■□□□□ 0.9
SRPRA-202ENST00000527817 PLCH2O75038 1416 aa20.67■□□□□ 0.9
SRPRA-202ENST00000527817 SCAPERQ9BY12 1400 aa20.66■□□□□ 0.9
SRPRA-202ENST00000527817 TTC37Q6PGP7 1564 aa20.65■□□□□ 0.9
SRPRA-202ENST00000527817 HECW1Q76N89 1606 aa20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms