RNA–Protein interactions for RNA: ENST00000527537.5

RDX-203, Transcript of radixin, humanhuman

TSL 1 (best)

Gene RDX, Length 3,403 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-203ENST00000527537 VSIG10Q8N0Z9 540 aa9.25□□□□□ -0.93
RDX-203ENST00000527537 IPO9Q96P70 1041 aaKnown RBP9.25□□□□□ -0.93
RDX-203ENST00000527537 UNC13AQ9UPW8 1703 aa9.24□□□□□ -0.93
RDX-203ENST00000527537 BRPF3Q9ULD4 1205 aa9.24□□□□□ -0.93
RDX-203ENST00000527537 RANGAP1P46060 587 aaPredicted RBP9.23□□□□□ -0.93
RDX-203ENST00000527537 PPP4R2Q9NY27 417 aa9.23□□□□□ -0.93
RDX-203ENST00000527537 IRX6P78412 446 aaPredicted RBP9.22□□□□□ -0.93
RDX-203ENST00000527537 USP35Q9P2H5 1018 aa9.22□□□□□ -0.93
RDX-203ENST00000527537 ZBTB47Q9UFB7 747 aaPredicted RBP9.22□□□□□ -0.93
RDX-203ENST00000527537 CCER2I3L3R5 266 aa9.21□□□□□ -0.94
RDX-203ENST00000527537 DHX57Q6P158 1386 aaKnown RBP9.21□□□□□ -0.94
RDX-203ENST00000527537 ANP32AP39687 249 aaKnown RBP9.21□□□□□ -0.94
RDX-203ENST00000527537 TNIKQ9UKE5 1360 aa9.2□□□□□ -0.94
RDX-203ENST00000527537 NEFMP07197 916 aa9.17□□□□□ -0.94
RDX-203ENST00000527537 DDX10Q13206 875 aaKnown RBP9.17□□□□□ -0.94
RDX-203ENST00000527537 FAM43AQ8N2R8 423 aa9.15□□□□□ -0.95
RDX-203ENST00000527537 GOLGA3Q08378 1498 aa9.15□□□□□ -0.95
RDX-203ENST00000527537 B4GALNT3Q6L9W6 998 aa9.14□□□□□ -0.95
RDX-203ENST00000527537 EEA1Q15075 1411 aa9.14□□□□□ -0.95
RDX-203ENST00000527537 PPP1R15AO75807 674 aaPredicted RBP9.14□□□□□ -0.95
RDX-203ENST00000527537 GSE1Q14687 1217 aa9.13□□□□□ -0.95
RDX-203ENST00000527537 BICRAQ9NZM4 1560 aa9.12□□□□□ -0.95
RDX-203ENST00000527537 ANP32CO43423 234 aa9.11□□□□□ -0.95
RDX-203ENST00000527537 FGD1P98174 961 aa9.11□□□□□ -0.95
RDX-203ENST00000527537 A0A0U1RQG5 324 aaPredicted RBP9.1□□□□□ -0.95
RDX-203ENST00000527537 RBM10P98175 930 aaKnown RBP9.1□□□□□ -0.95
RDX-203ENST00000527537 LAS1LQ9Y4W2 734 aaKnown RBP9.1□□□□□ -0.95
RDX-203ENST00000527537 AAMPQ13685 434 aa9.1□□□□□ -0.95
RDX-203ENST00000527537 SYNJ1O43426 1573 aa9.1□□□□□ -0.95
RDX-203ENST00000527537 PPM1GO15355 546 aaPredicted RBP9.09□□□□□ -0.95
RDX-203ENST00000527537 PDE4CQ08493 712 aa9.08□□□□□ -0.96
RDX-203ENST00000527537 CLIP1P30622 1438 aa9.08□□□□□ -0.96
RDX-203ENST00000527537 HNRNPUQ00839 825 aaKnown RBP eCLIP9.08□□□□□ -0.96
RDX-203ENST00000527537 RRP9O43818 475 aaKnown RBP9.08□□□□□ -0.96
RDX-203ENST00000527537 HSP90AA2PQ14568 343 aaPredicted RBP9.08□□□□□ -0.96
RDX-203ENST00000527537 CEP164Q9UPV0 1460 aa9.07□□□□□ -0.96
RDX-203ENST00000527537 BAZ1BQ9UIG0 1483 aaKnown RBP9.07□□□□□ -0.96
RDX-203ENST00000527537 ATAD2BQ9ULI0 1458 aa9.06□□□□□ -0.96
RDX-203ENST00000527537 FRAT1Q92837 279 aaPredicted RBP9.05□□□□□ -0.96
RDX-203ENST00000527537 RAPGEF2Q9Y4G8 1499 aa9.05□□□□□ -0.96
RDX-203ENST00000527537 PEG3Q9GZU2 1588 aa9.02□□□□□ -0.97
RDX-203ENST00000527537 VPS8Q8N3P4 1428 aa9.01□□□□□ -0.97
RDX-203ENST00000527537 DCAF11Q8TEB1 546 aa9.01□□□□□ -0.97
RDX-203ENST00000527537 KIF21BO75037 1637 aa9.01□□□□□ -0.97
RDX-203ENST00000527537 HSP90AA1P07900 732 aaKnown RBP9.01□□□□□ -0.97
RDX-203ENST00000527537 PDIA4P13667 645 aaKnown RBP9.01□□□□□ -0.97
RDX-203ENST00000527537 NCAPD3P42695 1498 aa9□□□□□ -0.97
RDX-203ENST00000527537 WDR97A6NE52 1622 aa9□□□□□ -0.97
RDX-203ENST00000527537 AEBP2Q6ZN18 517 aaPredicted RBP8.99□□□□□ -0.97
RDX-203ENST00000527537 NFKBIBQ15653 356 aa8.99□□□□□ -0.97
RDX-203ENST00000527537 NPM2Q86SE8 214 aaKnown RBP8.99□□□□□ -0.97
RDX-203ENST00000527537 RRAGDQ9NQL2 400 aaPredicted RBP8.99□□□□□ -0.97
RDX-203ENST00000527537 CUX2O14529 1486 aa8.97□□□□□ -0.97
RDX-203ENST00000527537 BCL11BQ9C0K0 894 aaPredicted RBP8.97□□□□□ -0.97
RDX-203ENST00000527537 SIN3AQ96ST3 1273 aa8.96□□□□□ -0.97
RDX-203ENST00000527537 NAP1L5Q96NT1 182 aaPredicted RBP8.96□□□□□ -0.98
RDX-203ENST00000527537 MAPKBP1O60336 1514 aa8.95□□□□□ -0.98
RDX-203ENST00000527537 PRDM4Q9UKN5 801 aa8.95□□□□□ -0.98
RDX-203ENST00000527537 HIRIP3Q9BW71 556 aaPredicted RBP8.94□□□□□ -0.98
RDX-203ENST00000527537 KANK4Q5T7N3 995 aaPredicted RBP8.94□□□□□ -0.98
RDX-203ENST00000527537 TOP2BQ02880 1626 aa8.93□□□□□ -0.98
RDX-203ENST00000527537 CALD1Q05682 793 aaKnown RBP8.92□□□□□ -0.98
RDX-203ENST00000527537 PNNQ9H307 717 aaKnown RBP8.92□□□□□ -0.98
RDX-203ENST00000527537 CENPJQ9HC77 1338 aaPredicted RBP8.91□□□□□ -0.98
RDX-203ENST00000527537 PDE4AP27815 886 aa8.91□□□□□ -0.98
RDX-203ENST00000527537 ZBED9Q6R2W3 1325 aa8.91□□□□□ -0.98
RDX-203ENST00000527537 DDRGK1Q96HY6 314 aa8.91□□□□□ -0.98
RDX-203ENST00000527537 TCERG1O14776 1098 aaKnown RBP8.9□□□□□ -0.98
RDX-203ENST00000527537 BACH2Q9BYV9 841 aa8.9□□□□□ -0.98
RDX-203ENST00000527537 ARAP1Q96P48 1450 aa8.89□□□□□ -0.99
RDX-203ENST00000527537 CLCN1P35523 988 aa8.89□□□□□ -0.99
RDX-203ENST00000527537 RNF123Q5XPI4 1314 aa8.88□□□□□ -0.99
RDX-203ENST00000527537 RGS3P49796 1198 aa8.88□□□□□ -0.99
RDX-203ENST00000527537 PDCL3Q9H2J4 239 aa8.88□□□□□ -0.99
RDX-203ENST00000527537 RRBP1Q9P2E9 1410 aaKnown RBP8.88□□□□□ -0.99
RDX-203ENST00000527537 PRXQ9BXM0 1461 aa8.87□□□□□ -0.99
RDX-203ENST00000527537 CUX1P39880 1505 aa8.87□□□□□ -0.99
RDX-203ENST00000527537 BIVM-ERCC5R4GMW8 1640 aa8.87□□□□□ -0.99
RDX-203ENST00000527537 AKNAQ7Z591 1439 aa8.87□□□□□ -0.99
RDX-203ENST00000527537 MS4A1P11836 297 aa8.86□□□□□ -0.99
RDX-203ENST00000527537 KIF27Q86VH2 1401 aa8.86□□□□□ -0.99
RDX-203ENST00000527537 FRAT2O75474 233 aaPredicted RBP8.86□□□□□ -0.99
RDX-203ENST00000527537 TAF7LQ5H9L4 462 aa8.86□□□□□ -0.99
RDX-203ENST00000527537 RAB3GAP2Q9H2M9 1393 aa8.85□□□□□ -0.99
RDX-203ENST00000527537 SMG6Q86US8 1419 aaKnown RBP8.85□□□□□ -0.99
RDX-203ENST00000527537 ERICH3Q5RHP9 1530 aa8.85□□□□□ -0.99
RDX-203ENST00000527537 ATP1B4Q9UN42 357 aaPredicted RBP8.84□□□□□ -0.99
RDX-203ENST00000527537 CCDC184Q52MB2 194 aa8.84□□□□□ -0.99
RDX-203ENST00000527537 L1TD1Q5T7N2 865 aaKnown RBP8.84□□□□□ -0.99
RDX-203ENST00000527537 SLC4A3P48751 1232 aa8.83□□□□□ -1
RDX-203ENST00000527537 P3H3Q8IVL6 736 aa8.82□□□□□ -1
RDX-203ENST00000527537 FAM9BQ8IZU0 186 aa8.82□□□□□ -1
RDX-203ENST00000527537 BBXQ8WY36 941 aaPredicted RBP8.81□□□□□ -1
RDX-203ENST00000527537 ARHGAP35Q9NRY4 1499 aa8.81□□□□□ -1
RDX-203ENST00000527537 CCNB3Q8WWL7 1395 aa8.81□□□□□ -1
RDX-203ENST00000527537 NAP1L2Q9ULW6 460 aaPredicted RBP8.8□□□□□ -1
RDX-203ENST00000527537 HMGXB3Q12766 1538 aa8.8□□□□□ -1
RDX-203ENST00000527537 TPM2P07951 284 aa8.8□□□□□ -1
RDX-203ENST00000527537 NUDCQ9Y266 331 aa8.8□□□□□ -1
RDX-203ENST00000527537 GTF2E1P29083 439 aaPredicted RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms