RNA–Protein interactions for RNA: ENST00000527409.1

LMNB2-204, Transcript of lamin B2, humanhuman

TSL 5

Gene LMNB2, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-204ENST00000527409 KIAA0586Q9BVV6 1533 aa38.25■■■■□ 3.71
LMNB2-204ENST00000527409 JPH4Q96JJ6 628 aa38.23■■■■□ 3.71
LMNB2-204ENST00000527409 PRG4Q92954 1404 aaPredicted RBP38.21■■■■□ 3.71
LMNB2-204ENST00000527409 RAPGEF2Q9Y4G8 1499 aa38.13■■■■□ 3.69
LMNB2-204ENST00000527409 IQGAP2Q13576 1575 aa38.02■■■■□ 3.68
LMNB2-204ENST00000527409 PRXQ9BXM0 1461 aa37.92■■■■□ 3.66
LMNB2-204ENST00000527409 TRHP20396 242 aaPredicted RBP37.87■■■■□ 3.65
LMNB2-204ENST00000527409 CTTNBP2Q8WZ74 1663 aa37.86■■■■□ 3.65
LMNB2-204ENST00000527409 CARMIL2Q6F5E8 1435 aa37.86■■■■□ 3.65
LMNB2-204ENST00000527409 EEA1Q15075 1411 aa37.84■■■■□ 3.65
LMNB2-204ENST00000527409 UGGT2Q9NYU1 1516 aa37.8■■■■□ 3.64
LMNB2-204ENST00000527409 CSRNP3Q8WYN3 585 aa37.77■■■■□ 3.64
LMNB2-204ENST00000527409 DISP1Q96F81 1524 aa37.73■■■■□ 3.63
LMNB2-204ENST00000527409 TNIKQ9UKE5 1360 aa37.73■■■■□ 3.63
LMNB2-204ENST00000527409 PTPRGP23470 1445 aa37.71■■■■□ 3.63
LMNB2-204ENST00000527409 CHIC1Q5VXU3 224 aa37.71■■■■□ 3.63
LMNB2-204ENST00000527409 ADCY10Q96PN6 1610 aa37.71■■■■□ 3.63
LMNB2-204ENST00000527409 KIAA0556O60303 1618 aa37.65■■■■□ 3.62
LMNB2-204ENST00000527409 NPM1P06748 294 aaKnown RBP eCLIP37.6■■■■□ 3.61
LMNB2-204ENST00000527409 GOLGA3Q08378 1498 aa37.58■■■■□ 3.61
LMNB2-204ENST00000527409 MAPKBP1O60336 1514 aa37.56■■■■□ 3.6
LMNB2-204ENST00000527409 TTBK1Q5TCY1 1321 aaPredicted RBP37.55■■■■□ 3.6
LMNB2-204ENST00000527409 FAM9AQ8IZU1 332 aaPredicted RBP37.52■■■■□ 3.6
LMNB2-204ENST00000527409 UHRF1BP1LA0JNW5 1464 aa37.49■■■■□ 3.59
LMNB2-204ENST00000527409 KIF21BO75037 1637 aa37.49■■■■□ 3.59
LMNB2-204ENST00000527409 KIF13AQ9H1H9 1805 aa37.47■■■■□ 3.59
LMNB2-204ENST00000527409 UACAQ9BZF9 1416 aa37.46■■■■□ 3.59
LMNB2-204ENST00000527409 ABCC2Q92887 1545 aa37.46■■■■□ 3.59
LMNB2-204ENST00000527409 ABCC10Q5T3U5 1492 aa37.38■■■■□ 3.57
LMNB2-204ENST00000527409 DIP2BQ9P265 1576 aa37.34■■■■□ 3.57
LMNB2-204ENST00000527409 SAMD9Q5K651 1589 aa37.32■■■■□ 3.56
LMNB2-204ENST00000527409 KDM5BQ9UGL1 1544 aa37.3■■■■□ 3.56
LMNB2-204ENST00000527409 PLB1Q6P1J6 1458 aa37.26■■■■□ 3.55
LMNB2-204ENST00000527409 ABCA8O94911 1581 aa37.25■■■■□ 3.55
LMNB2-204ENST00000527409 FAM69CQ0P6D2 419 aa37.25■■■■□ 3.55
LMNB2-204ENST00000527409 ZCCHC11Q5TAX3 1644 aaKnown RBP37.24■■■■□ 3.55
LMNB2-204ENST00000527409 ASXL2Q76L83 1435 aa37.21■■■■□ 3.55
LMNB2-204ENST00000527409 P3H3Q8IVL6 736 aa37.16■■■■□ 3.54
LMNB2-204ENST00000527409 EFCAB5A4FU69 1503 aa37.12■■■■□ 3.53
LMNB2-204ENST00000527409 GLI2P10070 1586 aa37.08■■■■□ 3.53
LMNB2-204ENST00000527409 UBTFP17480 764 aaKnown RBP37.07■■■■□ 3.52
LMNB2-204ENST00000527409 RANGAP1P46060 587 aaPredicted RBP37.06■■■■□ 3.52
LMNB2-204ENST00000527409 TSPOAP1O95153 1857 aa37.03■■■■□ 3.52
LMNB2-204ENST00000527409 EHMT2Q96KQ7 1210 aa37.02■■■■□ 3.52
LMNB2-204ENST00000527409 RAPGEF6Q8TEU7 1601 aa37.02■■■■□ 3.52
LMNB2-204ENST00000527409 FHOD3Q2V2M9 1422 aa37.02■■■■□ 3.52
LMNB2-204ENST00000527409 EPRSP07814 1512 aaKnown RBP37.01■■■■□ 3.52
LMNB2-204ENST00000527409 WDR7Q9Y4E6 1490 aa37.01■■■■□ 3.51
LMNB2-204ENST00000527409 MAP3K4Q9Y6R4 1608 aa36.92■■■■□ 3.5
LMNB2-204ENST00000527409 ATP10BO94823 1461 aa36.9■■■■□ 3.5
LMNB2-204ENST00000527409 PPRC1Q5VV67 1664 aaKnown RBP36.88■■■■□ 3.49
LMNB2-204ENST00000527409 NUP153P49790 1475 aaKnown RBP36.84■■■■□ 3.49
LMNB2-204ENST00000527409 KDM6BO15054 1643 aa36.83■■■■□ 3.49
LMNB2-204ENST00000527409 ARHGAP35Q9NRY4 1499 aa36.82■■■■□ 3.48
LMNB2-204ENST00000527409 ARID3CA6NKF2 412 aa36.81■■■■□ 3.48
LMNB2-204ENST00000527409 CFAP43Q8NDM7 1665 aa36.79■■■■□ 3.48
LMNB2-204ENST00000527409 TEX14Q8IWB6 1497 aa36.76■■■■□ 3.48
LMNB2-204ENST00000527409 FMN1Q68DA7 1419 aa36.75■■■■□ 3.47
LMNB2-204ENST00000527409 KCNH8Q96L42 1107 aa36.74■■■■□ 3.47
LMNB2-204ENST00000527409 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.69■■■■□ 3.46
LMNB2-204ENST00000527409 HNRNPUL2Q1KMD3 747 aaKnown RBP36.69■■■■□ 3.46
LMNB2-204ENST00000527409 CD109Q6YHK3 1445 aa36.68■■■■□ 3.46
LMNB2-204ENST00000527409 MAGI3Q5TCQ9 1506 aa36.65■■■■□ 3.46
LMNB2-204ENST00000527409 HECW1Q76N89 1606 aa36.63■■■■□ 3.45
LMNB2-204ENST00000527409 ABCA9Q8IUA7 1624 aa36.63■■■■□ 3.45
LMNB2-204ENST00000527409 PLEKHD1A6NEE1 506 aa36.55■■■■□ 3.44
LMNB2-204ENST00000527409 CDK13Q14004 1512 aaKnown RBP36.54■■■■□ 3.44
LMNB2-204ENST00000527409 CLIP1P30622 1438 aa36.51■■■■□ 3.43
LMNB2-204ENST00000527409 COL17A1Q9UMD9 1497 aaPredicted RBP36.49■■■■□ 3.43
LMNB2-204ENST00000527409 ATP1B4Q9UN42 357 aaPredicted RBP36.47■■■■□ 3.43
LMNB2-204ENST00000527409 PCF11O94913 1555 aaKnown RBP36.42■■■■□ 3.42
LMNB2-204ENST00000527409 LRRIQ1Q96JM4 1722 aa36.41■■■■□ 3.42
LMNB2-204ENST00000527409 CASKIN1Q8WXD9 1431 aa36.41■■■■□ 3.42
LMNB2-204ENST00000527409 CDK11AQ9UQ88 783 aaPredicted RBP36.37■■■■□ 3.41
LMNB2-204ENST00000527409 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.37■■■■□ 3.41
LMNB2-204ENST00000527409 PHLDB1Q86UU1 1377 aa36.37■■■■□ 3.41
LMNB2-204ENST00000527409 ARAP3Q8WWN8 1544 aa36.35■■■■□ 3.41
LMNB2-204ENST00000527409 CCDC18Q5T9S5 1454 aa36.34■■■■□ 3.41
LMNB2-204ENST00000527409 NEO1Q92859 1461 aa36.34■■■■□ 3.41
LMNB2-204ENST00000527409 FYCO1Q9BQS8 1478 aa36.34■■■■□ 3.41
LMNB2-204ENST00000527409 TTC37Q6PGP7 1564 aa36.33■■■■□ 3.41
LMNB2-204ENST00000527409 CFAP74Q9C0B2 1584 aa36.27■■■■□ 3.4
LMNB2-204ENST00000527409 CEP162Q5TB80 1403 aa36.27■■■■□ 3.4
LMNB2-204ENST00000527409 TROQ12816 1431 aaPredicted RBP36.26■■■■□ 3.4
LMNB2-204ENST00000527409 KIF14Q15058 1648 aa36.26■■■■□ 3.39
LMNB2-204ENST00000527409 FANCAO15360 1455 aa36.2■■■■□ 3.39
LMNB2-204ENST00000527409 AEBP2Q6ZN18 517 aaPredicted RBP36.19■■■■□ 3.38
LMNB2-204ENST00000527409 MYO5CQ9NQX4 1742 aa36.19■■■■□ 3.38
LMNB2-204ENST00000527409 PLCH2O75038 1416 aa36.15■■■■□ 3.38
LMNB2-204ENST00000527409 AKNAQ7Z591 1439 aa36.13■■■■□ 3.37
LMNB2-204ENST00000527409 LOC105371045A0A1W2PR82 267 aa36.12■■■■□ 3.37
LMNB2-204ENST00000527409 FRMPD1Q5SYB0 1578 aa36.09■■■■□ 3.37
LMNB2-204ENST00000527409 DENND4BO75064 1496 aaPredicted RBP36.06■■■■□ 3.36
LMNB2-204ENST00000527409 RICTORQ6R327 1708 aa36.05■■■■□ 3.36
LMNB2-204ENST00000527409 RAPGEF3O95398 923 aa36.05■■■■□ 3.36
LMNB2-204ENST00000527409 KDM4FA0A1W2PPD8 638 aa36.01■■■■□ 3.36
LMNB2-204ENST00000527409 ADGRL1O94910 1474 aa35.99■■■■□ 3.35
LMNB2-204ENST00000527409 EFCAB2Q5VUJ9 269 aa35.99■■■■□ 3.35
LMNB2-204ENST00000527409 ARHGAP5Q13017 1502 aa35.98■■■■□ 3.35
LMNB2-204ENST00000527409 PREX2Q70Z35 1606 aa35.97■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms