RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 FAM69CQ0P6D2 419 aa23.31■■□□□ 1.32
CLNS1A-207ENST00000527133 RUSC2Q8N2Y8 1516 aa23.31■■□□□ 1.32
CLNS1A-207ENST00000527133 ABCC10Q5T3U5 1492 aa23.29■■□□□ 1.32
CLNS1A-207ENST00000527133 NPM1P06748 294 aaKnown RBP eCLIP23.28■■□□□ 1.32
CLNS1A-207ENST00000527133 MAPKBP1O60336 1514 aa23.24■■□□□ 1.31
CLNS1A-207ENST00000527133 ADCY10Q96PN6 1610 aa23.22■■□□□ 1.31
CLNS1A-207ENST00000527133 DIP2BQ9P265 1576 aa23.22■■□□□ 1.31
CLNS1A-207ENST00000527133 KIAA0586Q9BVV6 1533 aa23.13■■□□□ 1.29
CLNS1A-207ENST00000527133 KDM6BO15054 1643 aa23.13■■□□□ 1.29
CLNS1A-207ENST00000527133 IGF1RP08069 1367 aa23.1■■□□□ 1.29
CLNS1A-207ENST00000527133 TSPOAP1O95153 1857 aa23.09■■□□□ 1.29
CLNS1A-207ENST00000527133 KDM4FA0A1W2PPD8 638 aa23.08■■□□□ 1.29
CLNS1A-207ENST00000527133 CUL7Q14999 1698 aa23.06■■□□□ 1.28
CLNS1A-207ENST00000527133 KIF27Q86VH2 1401 aa23.05■■□□□ 1.28
CLNS1A-207ENST00000527133 TTBK1Q5TCY1 1321 aaPredicted RBP23.04■■□□□ 1.28
CLNS1A-207ENST00000527133 PTPRGP23470 1445 aa23.02■■□□□ 1.28
CLNS1A-207ENST00000527133 ABCC2Q92887 1545 aa22.94■■□□□ 1.26
CLNS1A-207ENST00000527133 TNIKQ9UKE5 1360 aa22.94■■□□□ 1.26
CLNS1A-207ENST00000527133 CARMIL2Q6F5E8 1435 aa22.93■■□□□ 1.26
CLNS1A-207ENST00000527133 CARMIL1Q5VZK9 1371 aa22.93■■□□□ 1.26
CLNS1A-207ENST00000527133 ASXL2Q76L83 1435 aa22.91■■□□□ 1.26
CLNS1A-207ENST00000527133 PLB1Q6P1J6 1458 aa22.89■■□□□ 1.25
CLNS1A-207ENST00000527133 IQGAP2Q13576 1575 aa22.87■■□□□ 1.25
CLNS1A-207ENST00000527133 PPRC1Q5VV67 1664 aaKnown RBP22.87■■□□□ 1.25
CLNS1A-207ENST00000527133 GLI2P10070 1586 aa22.86■■□□□ 1.25
CLNS1A-207ENST00000527133 UHRF1BP1LA0JNW5 1464 aa22.84■■□□□ 1.25
CLNS1A-207ENST00000527133 UACAQ9BZF9 1416 aa22.82■■□□□ 1.24
CLNS1A-207ENST00000527133 ADGRL1O94910 1474 aa22.81■■□□□ 1.24
CLNS1A-207ENST00000527133 DISP1Q96F81 1524 aa22.79■■□□□ 1.24
CLNS1A-207ENST00000527133 ILDR1Q86SU0 546 aaPredicted RBP22.78■■□□□ 1.24
CLNS1A-207ENST00000527133 EPRSP07814 1512 aaKnown RBP22.77■■□□□ 1.24
CLNS1A-207ENST00000527133 COL17A1Q9UMD9 1497 aaPredicted RBP22.76■■□□□ 1.23
CLNS1A-207ENST00000527133 KDM5BQ9UGL1 1544 aa22.74■■□□□ 1.23
CLNS1A-207ENST00000527133 MAP3K4Q9Y6R4 1608 aa22.74■■□□□ 1.23
CLNS1A-207ENST00000527133 TEX14Q8IWB6 1497 aa22.71■■□□□ 1.23
CLNS1A-207ENST00000527133 ZCCHC11Q5TAX3 1644 aaKnown RBP22.71■■□□□ 1.23
CLNS1A-207ENST00000527133 UGGT2Q9NYU1 1516 aa22.7■■□□□ 1.22
CLNS1A-207ENST00000527133 RAPGEF2Q9Y4G8 1499 aa22.67■■□□□ 1.22
CLNS1A-207ENST00000527133 KIAA0556O60303 1618 aa22.67■■□□□ 1.22
CLNS1A-207ENST00000527133 WDR7Q9Y4E6 1490 aa22.62■■□□□ 1.21
CLNS1A-207ENST00000527133 HECW2Q9P2P5 1572 aa22.62■■□□□ 1.21
CLNS1A-207ENST00000527133 KCNH8Q96L42 1107 aa22.53■■□□□ 1.2
CLNS1A-207ENST00000527133 CD109Q6YHK3 1445 aa22.53■■□□□ 1.2
CLNS1A-207ENST00000527133 MAGI3Q5TCQ9 1506 aa22.51■■□□□ 1.19
CLNS1A-207ENST00000527133 CTTNBP2Q8WZ74 1663 aa22.5■■□□□ 1.19
CLNS1A-207ENST00000527133 CFAP43Q8NDM7 1665 aa22.49■■□□□ 1.19
CLNS1A-207ENST00000527133 GOLGA3Q08378 1498 aa22.49■■□□□ 1.19
CLNS1A-207ENST00000527133 ABCA8O94911 1581 aa22.48■■□□□ 1.19
CLNS1A-207ENST00000527133 KIF21BO75037 1637 aa22.41■■□□□ 1.18
CLNS1A-207ENST00000527133 ARID3CA6NKF2 412 aa22.38■■□□□ 1.17
CLNS1A-207ENST00000527133 ARAP3Q8WWN8 1544 aa22.34■■□□□ 1.17
CLNS1A-207ENST00000527133 PRXQ9BXM0 1461 aa22.34■■□□□ 1.17
CLNS1A-207ENST00000527133 P3H3Q8IVL6 736 aa22.31■■□□□ 1.16
CLNS1A-207ENST00000527133 ATP10BO94823 1461 aa22.3■■□□□ 1.16
CLNS1A-207ENST00000527133 FAM9AQ8IZU1 332 aaPredicted RBP22.3■■□□□ 1.16
CLNS1A-207ENST00000527133 ABCA9Q8IUA7 1624 aa22.25■■□□□ 1.15
CLNS1A-207ENST00000527133 PHLDB1Q86UU1 1377 aa22.25■■□□□ 1.15
CLNS1A-207ENST00000527133 PTPRMP28827 1452 aa22.24■■□□□ 1.15
CLNS1A-207ENST00000527133 RAPGEF3O95398 923 aa22.24■■□□□ 1.15
CLNS1A-207ENST00000527133 ADAMTSL3P82987 1691 aa22.23■■□□□ 1.15
CLNS1A-207ENST00000527133 FBXO41Q8TF61 875 aa22.22■■□□□ 1.15
CLNS1A-207ENST00000527133 NEO1Q92859 1461 aa22.19■■□□□ 1.14
CLNS1A-207ENST00000527133 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.18■■□□□ 1.14
CLNS1A-207ENST00000527133 HNRNPUL2Q1KMD3 747 aaKnown RBP22.18■■□□□ 1.14
CLNS1A-207ENST00000527133 ARID4BQ4LE39 1312 aaPredicted RBP22.17■■□□□ 1.14
CLNS1A-207ENST00000527133 RAPGEF6Q8TEU7 1601 aa22.17■■□□□ 1.14
CLNS1A-207ENST00000527133 SAMD9Q5K651 1589 aa22.16■■□□□ 1.14
CLNS1A-207ENST00000527133 FRMPD1Q5SYB0 1578 aa22.15■■□□□ 1.14
CLNS1A-207ENST00000527133 BCORL1Q5H9F3 1711 aa22.14■■□□□ 1.14
CLNS1A-207ENST00000527133 MADDQ8WXG6 1647 aa22.13■■□□□ 1.13
CLNS1A-207ENST00000527133 PCF11O94913 1555 aaKnown RBP22.1■■□□□ 1.13
CLNS1A-207ENST00000527133 NUP153P49790 1475 aaKnown RBP22.09■■□□□ 1.13
CLNS1A-207ENST00000527133 CSRNP3Q8WYN3 585 aa22.08■■□□□ 1.13
CLNS1A-207ENST00000527133 LMTK3Q96Q04 1460 aa22.08■■□□□ 1.12
CLNS1A-207ENST00000527133 RANGAP1P46060 587 aaPredicted RBP22.07■■□□□ 1.12
CLNS1A-207ENST00000527133 ARHGEF40Q8TER5 1519 aa22.06■■□□□ 1.12
CLNS1A-207ENST00000527133 DENND4BO75064 1496 aaPredicted RBP22.04■■□□□ 1.12
CLNS1A-207ENST00000527133 FHOD3Q2V2M9 1422 aa22.04■■□□□ 1.12
CLNS1A-207ENST00000527133 RIMS1Q86UR5 1692 aaKnown RBP22.04■■□□□ 1.12
CLNS1A-207ENST00000527133 PLEKHD1A6NEE1 506 aa22.02■■□□□ 1.12
CLNS1A-207ENST00000527133 RICTORQ6R327 1708 aa22.02■■□□□ 1.12
CLNS1A-207ENST00000527133 AKNAQ7Z591 1439 aa22.01■■□□□ 1.11
CLNS1A-207ENST00000527133 PLPPR3Q6T4P5 718 aa22■■□□□ 1.11
CLNS1A-207ENST00000527133 FANCAO15360 1455 aa22■■□□□ 1.11
CLNS1A-207ENST00000527133 HSPA2P54652 639 aa21.98■■□□□ 1.11
CLNS1A-207ENST00000527133 CFAP74Q9C0B2 1584 aa21.97■■□□□ 1.11
CLNS1A-207ENST00000527133 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.96■■□□□ 1.118e-8■■□□□ 13.9
CLNS1A-207ENST00000527133 POGZQ7Z3K3 1410 aa21.95■■□□□ 1.1
CLNS1A-207ENST00000527133 TTC37Q6PGP7 1564 aa21.95■■□□□ 1.1
CLNS1A-207ENST00000527133 ZMYM4Q5VZL5 1548 aa21.94■■□□□ 1.1
CLNS1A-207ENST00000527133 ZFYVE16Q7Z3T8 1539 aa21.93■■□□□ 1.1
CLNS1A-207ENST00000527133 YEATS2Q9ULM3 1422 aa21.93■■□□□ 1.1
CLNS1A-207ENST00000527133 SIGLEC1Q9BZZ2 1709 aa21.92■■□□□ 1.1
CLNS1A-207ENST00000527133 EFCAB5A4FU69 1503 aa21.91■■□□□ 1.1
CLNS1A-207ENST00000527133 MLECQ14165 292 aa21.9■■□□□ 1.1
CLNS1A-207ENST00000527133 EEA1Q15075 1411 aa21.89■■□□□ 1.09
CLNS1A-207ENST00000527133 MAGI2Q86UL8 1455 aa21.88■■□□□ 1.09
CLNS1A-207ENST00000527133 HECW1Q76N89 1606 aa21.87■■□□□ 1.09
CLNS1A-207ENST00000527133 CDK13Q14004 1512 aaKnown RBP21.86■■□□□ 1.09
CLNS1A-207ENST00000527133 FER1L4A9Z1Z3 1794 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms