RNA–Protein interactions for RNA: ENST00000526938.5

CTNND1-215, Transcript of catenin delta 1, humanhuman

TSL 5 BASIC

Gene CTNND1, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-215ENST00000526938 MTUS2Q5JR59 1369 aa12.57□□□□□ -0.4
CTNND1-215ENST00000526938 CHIC2Q9UKJ5 165 aa12.56□□□□□ -0.4
CTNND1-215ENST00000526938 AQRO60306 1485 aaKnown RBP eCLIP12.55□□□□□ -0.42e-9■■■□□ 18.1
CTNND1-215ENST00000526938 URB2Q14146 1524 aaKnown RBP12.55□□□□□ -0.4
CTNND1-215ENST00000526938 FHAD1B1AJZ9 1412 aa12.54□□□□□ -0.4
CTNND1-215ENST00000526938 GAPVD1Q14C86 1478 aa12.54□□□□□ -0.4
CTNND1-215ENST00000526938 CHMP7Q8WUX9 453 aaPredicted RBP12.53□□□□□ -0.4
CTNND1-215ENST00000526938 DNMBPQ6XZF7 1577 aa12.53□□□□□ -0.4
CTNND1-215ENST00000526938 CENPBP07199 599 aaPredicted RBP12.52□□□□□ -0.41
CTNND1-215ENST00000526938 SIN3AQ96ST3 1273 aa12.52□□□□□ -0.41
CTNND1-215ENST00000526938 ERCC6Q03468 1493 aa12.51□□□□□ -0.41
CTNND1-215ENST00000526938 ABCA10Q8WWZ4 1543 aa12.51□□□□□ -0.41
CTNND1-215ENST00000526938 MIER1Q8N108 512 aa12.51□□□□□ -0.41
CTNND1-215ENST00000526938 PHLDB1Q86UU1 1377 aa12.5□□□□□ -0.41
CTNND1-215ENST00000526938 TRIM52Q96A61 297 aa12.5□□□□□ -0.41
CTNND1-215ENST00000526938 DHX57Q6P158 1386 aaKnown RBP12.49□□□□□ -0.41
CTNND1-215ENST00000526938 RRP7BPQ9NSQ0 103 aa12.48□□□□□ -0.41
CTNND1-215ENST00000526938 RAB3GAP2Q9H2M9 1393 aa12.48□□□□□ -0.41
CTNND1-215ENST00000526938 HIRIP3Q9BW71 556 aaPredicted RBP12.47□□□□□ -0.41
CTNND1-215ENST00000526938 LAMC3Q9Y6N6 1575 aa12.46□□□□□ -0.41
CTNND1-215ENST00000526938 ZNF777Q9ULD5 760 aaPredicted RBP12.45□□□□□ -0.42
CTNND1-215ENST00000526938 LRRC9Q6ZRR7 1453 aa12.44□□□□□ -0.42
CTNND1-215ENST00000526938 FMN1Q68DA7 1419 aa12.43□□□□□ -0.42
CTNND1-215ENST00000526938 RRBP1Q9P2E9 1410 aaKnown RBP12.43□□□□□ -0.42
CTNND1-215ENST00000526938 SCAF1Q9H7N4 1312 aaKnown RBP12.42□□□□□ -0.42
CTNND1-215ENST00000526938 ACIN1Q9UKV3 1341 aaKnown RBP12.41□□□□□ -0.42
CTNND1-215ENST00000526938 SETD5Q9C0A6 1442 aa12.4□□□□□ -0.42
CTNND1-215ENST00000526938 GTF3C3Q9Y5Q9 886 aa12.39□□□□□ -0.43
CTNND1-215ENST00000526938 ZNF608Q9ULD9 1512 aaPredicted RBP12.38□□□□□ -0.43
CTNND1-215ENST00000526938 CLSPNQ9HAW4 1339 aa12.37□□□□□ -0.43
CTNND1-215ENST00000526938 TIAM1Q13009 1591 aa12.37□□□□□ -0.43
CTNND1-215ENST00000526938 CASKIN1Q8WXD9 1431 aa12.37□□□□□ -0.43
CTNND1-215ENST00000526938 PRDM2Q13029 1718 aa12.37□□□□□ -0.43
CTNND1-215ENST00000526938 MRC2Q9UBG0 1479 aa12.36□□□□□ -0.43
CTNND1-215ENST00000526938 CDK11AQ9UQ88 783 aaPredicted RBP12.36□□□□□ -0.43
CTNND1-215ENST00000526938 DDX10Q13206 875 aaKnown RBP12.35□□□□□ -0.43
CTNND1-215ENST00000526938 PCF11O94913 1555 aaKnown RBP12.35□□□□□ -0.43
CTNND1-215ENST00000526938 KIF21AQ7Z4S6 1674 aa12.33□□□□□ -0.44
CTNND1-215ENST00000526938 JPH4Q96JJ6 628 aa12.32□□□□□ -0.44
CTNND1-215ENST00000526938 FOXD1Q16676 465 aa12.32□□□□□ -0.44
CTNND1-215ENST00000526938 GRIN2BQ13224 1484 aa12.32□□□□□ -0.44
CTNND1-215ENST00000526938 TONSLQ96HA7 1378 aa12.31□□□□□ -0.44
CTNND1-215ENST00000526938 FYCO1Q9BQS8 1478 aa12.31□□□□□ -0.44
CTNND1-215ENST00000526938 CNGB1Q14028 1251 aaPredicted RBP12.3□□□□□ -0.44
CTNND1-215ENST00000526938 ZNF644Q9H582 1327 aaPredicted RBP12.3□□□□□ -0.44
CTNND1-215ENST00000526938 FGD6Q6ZV73 1430 aa12.29□□□□□ -0.44
CTNND1-215ENST00000526938 CFDP1Q9UEE9 299 aaPredicted RBP12.29□□□□□ -0.44
CTNND1-215ENST00000526938 CUL7Q14999 1698 aa12.28□□□□□ -0.44
CTNND1-215ENST00000526938 EFCAB5A4FU69 1503 aa12.28□□□□□ -0.44
CTNND1-215ENST00000526938 SNAPC4Q5SXM2 1469 aa12.27□□□□□ -0.45
CTNND1-215ENST00000526938 ZNF326Q5BKZ1 582 aaKnown RBP12.27□□□□□ -0.45
CTNND1-215ENST00000526938 NCOA2Q15596 1464 aa12.27□□□□□ -0.45
CTNND1-215ENST00000526938 PLEKHD1A6NEE1 506 aa12.26□□□□□ -0.45
CTNND1-215ENST00000526938 PRKCSHP14314 528 aaPredicted RBP12.26□□□□□ -0.45
CTNND1-215ENST00000526938 POLR3GLQ9BT43 218 aa12.26□□□□□ -0.45
CTNND1-215ENST00000526938 IFT140Q96RY7 1462 aa12.26□□□□□ -0.45
CTNND1-215ENST00000526938 AEBP2Q6ZN18 517 aaPredicted RBP12.23□□□□□ -0.45
CTNND1-215ENST00000526938 KCNH8Q96L42 1107 aa12.23□□□□□ -0.45
CTNND1-215ENST00000526938 MAP3K1Q13233 1512 aa12.23□□□□□ -0.45
CTNND1-215ENST00000526938 SLC4A1APQ9BWU0 796 aaKnown RBP12.23□□□□□ -0.45
CTNND1-215ENST00000526938 MYOM3Q5VTT5 1437 aa12.23□□□□□ -0.45
CTNND1-215ENST00000526938 CDK13Q14004 1512 aaKnown RBP12.23□□□□□ -0.45
CTNND1-215ENST00000526938 PPP1R15AO75807 674 aaPredicted RBP12.22□□□□□ -0.45
CTNND1-215ENST00000526938 ABCA5Q8WWZ7 1642 aa12.22□□□□□ -0.45
CTNND1-215ENST00000526938 PTPRKQ15262 1439 aa12.21□□□□□ -0.45
CTNND1-215ENST00000526938 TARBP1Q13395 1621 aaKnown RBP12.19□□□□□ -0.46
CTNND1-215ENST00000526938 MPHOSPH9Q99550 1183 aa12.19□□□□□ -0.46
CTNND1-215ENST00000526938 IQGAP2Q13576 1575 aa12.19□□□□□ -0.46
CTNND1-215ENST00000526938 CCDC18Q5T9S5 1454 aa12.18□□□□□ -0.46
CTNND1-215ENST00000526938 MYT1LQ9UL68 1186 aa12.18□□□□□ -0.46
CTNND1-215ENST00000526938 EPRSP07814 1512 aaKnown RBP12.17□□□□□ -0.46
CTNND1-215ENST00000526938 CARMIL2Q6F5E8 1435 aa12.17□□□□□ -0.46
CTNND1-215ENST00000526938 KIAA0586Q9BVV6 1533 aa12.17□□□□□ -0.46
CTNND1-215ENST00000526938 TSPY4P0CV99 314 aa12.16□□□□□ -0.46
CTNND1-215ENST00000526938 TSPY10P0CW01 314 aa12.16□□□□□ -0.46
CTNND1-215ENST00000526938 CTTNBP2Q8WZ74 1663 aa12.16□□□□□ -0.46
CTNND1-215ENST00000526938 PRG4Q92954 1404 aaPredicted RBP12.16□□□□□ -0.46
CTNND1-215ENST00000526938 ANP32CO43423 234 aa12.16□□□□□ -0.46
CTNND1-215ENST00000526938 GRIN2AQ12879 1464 aa12.15□□□□□ -0.46
CTNND1-215ENST00000526938 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.15□□□□□ -0.461e-8■■□□□ 13.5
CTNND1-215ENST00000526938 HNRNPMP52272 730 aaKnown RBP eCLIP12.14□□□□□ -0.475e-7■■■■□ 21
CTNND1-215ENST00000526938 PLB1Q6P1J6 1458 aa12.14□□□□□ -0.47
CTNND1-215ENST00000526938 NAIPQ13075 1403 aa12.13□□□□□ -0.47
CTNND1-215ENST00000526938 MAPKBP1O60336 1514 aa12.13□□□□□ -0.47
CTNND1-215ENST00000526938 L3MBTL2Q969R5 705 aa12.12□□□□□ -0.47
CTNND1-215ENST00000526938 KDM2AQ9Y2K7 1162 aa12.12□□□□□ -0.47
CTNND1-215ENST00000526938 TIMELESSQ9UNS1 1208 aa12.12□□□□□ -0.47
CTNND1-215ENST00000526938 ADAMTS12P58397 1594 aa12.12□□□□□ -0.47
CTNND1-215ENST00000526938 HFM1A2PYH4 1435 aa12.11□□□□□ -0.47
CTNND1-215ENST00000526938 WDR97A6NE52 1622 aa12.11□□□□□ -0.47
CTNND1-215ENST00000526938 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.11□□□□□ -0.47
CTNND1-215ENST00000526938 EHBP1L1Q8N3D4 1523 aa12.1□□□□□ -0.47
CTNND1-215ENST00000526938 UACAQ9BZF9 1416 aa12.1□□□□□ -0.47
CTNND1-215ENST00000526938 MAGI3Q5TCQ9 1506 aa12.1□□□□□ -0.47
CTNND1-215ENST00000526938 PTPRGP23470 1445 aa12.1□□□□□ -0.47
CTNND1-215ENST00000526938 WDR62O43379 1518 aa12.09□□□□□ -0.47
CTNND1-215ENST00000526938 THOC2Q8NI27 1593 aaKnown RBP12.09□□□□□ -0.47
CTNND1-215ENST00000526938 CFAP43Q8NDM7 1665 aa12.09□□□□□ -0.47
CTNND1-215ENST00000526938 SYNJ2O15056 1496 aa12.09□□□□□ -0.47
CTNND1-215ENST00000526938 PKD2Q13563 968 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms