RNA–Protein interactions for RNA: ENST00000526216.1

COLCA2-202, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,332 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-202ENST00000526216 CTTNBP2Q8WZ74 1663 aa23.28■■□□□ 1.32
COLCA2-202ENST00000526216 CEP162Q5TB80 1403 aa23.26■■□□□ 1.31
COLCA2-202ENST00000526216 CHD1O14646 1710 aa23.26■■□□□ 1.31
COLCA2-202ENST00000526216 CEP170Q5SW79 1584 aa23.23■■□□□ 1.31
COLCA2-202ENST00000526216 CHMP7Q8WUX9 453 aaPredicted RBP23.21■■□□□ 1.31
COLCA2-202ENST00000526216 NUP160Q12769 1436 aa23.19■■□□□ 1.3
COLCA2-202ENST00000526216 FBLN2P98095 1184 aa23.18■■□□□ 1.3
COLCA2-202ENST00000526216 FOXD1Q16676 465 aa23.17■■□□□ 1.3
COLCA2-202ENST00000526216 CLIP1P30622 1438 aa23.15■■□□□ 1.3
COLCA2-202ENST00000526216 IQGAP2Q13576 1575 aa23.14■■□□□ 1.29
COLCA2-202ENST00000526216 KIAA0586Q9BVV6 1533 aa23.12■■□□□ 1.29
COLCA2-202ENST00000526216 RANGAP1P46060 587 aaPredicted RBP23.1■■□□□ 1.29
COLCA2-202ENST00000526216 ARHGAP35Q9NRY4 1499 aa23.1■■□□□ 1.29
COLCA2-202ENST00000526216 ARAP1Q96P48 1450 aa23.07■■□□□ 1.28
COLCA2-202ENST00000526216 SAMD9Q5K651 1589 aa23.06■■□□□ 1.28
COLCA2-202ENST00000526216 UGGT2Q9NYU1 1516 aa23.04■■□□□ 1.28
COLCA2-202ENST00000526216 EFCAB5A4FU69 1503 aa23.03■■□□□ 1.28
COLCA2-202ENST00000526216 CLASP1Q7Z460 1538 aa23.02■■□□□ 1.28
COLCA2-202ENST00000526216 DISP1Q96F81 1524 aa22.96■■□□□ 1.27
COLCA2-202ENST00000526216 FHOD3Q2V2M9 1422 aa22.95■■□□□ 1.27
COLCA2-202ENST00000526216 SHROOM2Q13796 1616 aa22.95■■□□□ 1.26
COLCA2-202ENST00000526216 KIAA0556O60303 1618 aa22.94■■□□□ 1.26
COLCA2-202ENST00000526216 P3H3Q8IVL6 736 aa22.92■■□□□ 1.26
COLCA2-202ENST00000526216 VPS8Q8N3P4 1428 aa22.91■■□□□ 1.26
COLCA2-202ENST00000526216 JPH4Q96JJ6 628 aa22.9■■□□□ 1.26
COLCA2-202ENST00000526216 ERCC6L2Q5T890 1561 aa22.84■■□□□ 1.25
COLCA2-202ENST00000526216 PRG4Q92954 1404 aaPredicted RBP22.83■■□□□ 1.25
COLCA2-202ENST00000526216 OSCARQ8IYS5 282 aa22.81■■□□□ 1.24
COLCA2-202ENST00000526216 PCF11O94913 1555 aaKnown RBP22.8■■□□□ 1.24
COLCA2-202ENST00000526216 CARMIL2Q6F5E8 1435 aa22.78■■□□□ 1.24
COLCA2-202ENST00000526216 FMN1Q68DA7 1419 aa22.76■■□□□ 1.23
COLCA2-202ENST00000526216 CASKIN1Q8WXD9 1431 aa22.72■■□□□ 1.23
COLCA2-202ENST00000526216 FYCO1Q9BQS8 1478 aa22.71■■□□□ 1.23
COLCA2-202ENST00000526216 LRRIQ1Q96JM4 1722 aa22.68■■□□□ 1.22
COLCA2-202ENST00000526216 TTBK1Q5TCY1 1321 aaPredicted RBP22.65■■□□□ 1.22
COLCA2-202ENST00000526216 RAPGEF6Q8TEU7 1601 aa22.64■■□□□ 1.22
COLCA2-202ENST00000526216 ABCA8O94911 1581 aa22.64■■□□□ 1.21
COLCA2-202ENST00000526216 PLB1Q6P1J6 1458 aa22.63■■□□□ 1.21
COLCA2-202ENST00000526216 DNAJC5Q9H3Z4 198 aa22.63■■□□□ 1.21
COLCA2-202ENST00000526216 PTPRGP23470 1445 aa22.63■■□□□ 1.21
COLCA2-202ENST00000526216 HECW1Q76N89 1606 aa22.62■■□□□ 1.21
COLCA2-202ENST00000526216 CFAP43Q8NDM7 1665 aa22.62■■□□□ 1.21
COLCA2-202ENST00000526216 TIAM1Q13009 1591 aa22.61■■□□□ 1.21
COLCA2-202ENST00000526216 NUP153P49790 1475 aaKnown RBP22.59■■□□□ 1.21
COLCA2-202ENST00000526216 MAP3K1Q13233 1512 aa22.59■■□□□ 1.21
COLCA2-202ENST00000526216 PPARGC1BQ86YN6 1023 aaKnown RBP22.58■■□□□ 1.21
COLCA2-202ENST00000526216 ARHGEF11O15085 1522 aa22.55■■□□□ 1.2
COLCA2-202ENST00000526216 ATP1B4Q9UN42 357 aaPredicted RBP22.55■■□□□ 1.2
COLCA2-202ENST00000526216 EPRSP07814 1512 aaKnown RBP22.54■■□□□ 1.2
COLCA2-202ENST00000526216 CDK13Q14004 1512 aaKnown RBP22.54■■□□□ 1.2
COLCA2-202ENST00000526216 KANK4Q5T7N3 995 aaPredicted RBP22.53■■□□□ 1.2
COLCA2-202ENST00000526216 UACAQ9BZF9 1416 aa22.51■■□□□ 1.19
COLCA2-202ENST00000526216 CCDC18Q5T9S5 1454 aa22.51■■□□□ 1.19
COLCA2-202ENST00000526216 ABCC2Q92887 1545 aa22.49■■□□□ 1.19
COLCA2-202ENST00000526216 RIMBP3CA6NJZ7 1639 aa22.49■■□□□ 1.19
COLCA2-202ENST00000526216 RIMBP3BA6NNM3 1639 aa22.49■■□□□ 1.19
COLCA2-202ENST00000526216 RIMBP3Q9UFD9 1639 aa22.49■■□□□ 1.19
COLCA2-202ENST00000526216 APLP2Q06481 763 aa22.49■■□□□ 1.19
COLCA2-202ENST00000526216 MAGI3Q5TCQ9 1506 aa22.49■■□□□ 1.19
COLCA2-202ENST00000526216 LRRC9Q6ZRR7 1453 aa22.48■■□□□ 1.19
COLCA2-202ENST00000526216 ARID3CA6NKF2 412 aa22.46■■□□□ 1.19
COLCA2-202ENST00000526216 UHRF1BP1LA0JNW5 1464 aa22.46■■□□□ 1.19
COLCA2-202ENST00000526216 ADCY10Q96PN6 1610 aa22.45■■□□□ 1.18
COLCA2-202ENST00000526216 ATP10BO94823 1461 aa22.44■■□□□ 1.18
COLCA2-202ENST00000526216 EHBP1L1Q8N3D4 1523 aa22.38■■□□□ 1.17
COLCA2-202ENST00000526216 KDM5BQ9UGL1 1544 aa22.37■■□□□ 1.17
COLCA2-202ENST00000526216 ZCCHC11Q5TAX3 1644 aaKnown RBP22.36■■□□□ 1.17
COLCA2-202ENST00000526216 MTUS2Q5JR59 1369 aa22.33■■□□□ 1.17
COLCA2-202ENST00000526216 TROQ12816 1431 aaPredicted RBP22.3■■□□□ 1.16
COLCA2-202ENST00000526216 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.29■■□□□ 1.16
COLCA2-202ENST00000526216 HNRNPUL2Q1KMD3 747 aaKnown RBP22.29■■□□□ 1.16
COLCA2-202ENST00000526216 SUPT6HQ7KZ85 1726 aaKnown RBP22.28■■□□□ 1.16
COLCA2-202ENST00000526216 NCOA2Q15596 1464 aa22.28■■□□□ 1.16
COLCA2-202ENST00000526216 PHLDB1Q86UU1 1377 aa22.27■■□□□ 1.16
COLCA2-202ENST00000526216 KIF14Q15058 1648 aa22.27■■□□□ 1.15
COLCA2-202ENST00000526216 CYB5RLQ6IPT4 315 aa22.24■■□□□ 1.15
COLCA2-202ENST00000526216 CDK11AQ9UQ88 783 aaPredicted RBP22.23■■□□□ 1.15
COLCA2-202ENST00000526216 TRIM26Q12899 539 aaPredicted RBP22.22■■□□□ 1.15
COLCA2-202ENST00000526216 MSH5O43196 834 aa22.2■■□□□ 1.14
COLCA2-202ENST00000526216 PLEKHD1A6NEE1 506 aa22.19■■□□□ 1.14
COLCA2-202ENST00000526216 ABCC10Q5T3U5 1492 aa22.18■■□□□ 1.14
COLCA2-202ENST00000526216 RRBP1Q9P2E9 1410 aaKnown RBP22.18■■□□□ 1.14
COLCA2-202ENST00000526216 MYOM3Q5VTT5 1437 aa22.14■■□□□ 1.14
COLCA2-202ENST00000526216 ASXL2Q76L83 1435 aa22.14■■□□□ 1.14
COLCA2-202ENST00000526216 WDR7Q9Y4E6 1490 aa22.14■■□□□ 1.14
COLCA2-202ENST00000526216 TTC37Q6PGP7 1564 aa22.12■■□□□ 1.13
COLCA2-202ENST00000526216 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.12■■□□□ 1.13
COLCA2-202ENST00000526216 PCGF6Q9BYE7 350 aa22.11■■□□□ 1.13
COLCA2-202ENST00000526216 FGD6Q6ZV73 1430 aa22.11■■□□□ 1.13
COLCA2-202ENST00000526216 CCNB3Q8WWL7 1395 aa22.09■■□□□ 1.13
COLCA2-202ENST00000526216 GPATCH8Q9UKJ3 1502 aaKnown RBP22.09■■□□□ 1.13
COLCA2-202ENST00000526216 CDC42BPAQ5VT25 1732 aa22.09■■□□□ 1.13
COLCA2-202ENST00000526216 MAPKBP1O60336 1514 aa22.08■■□□□ 1.13
COLCA2-202ENST00000526216 NPM1P06748 294 aaKnown RBP eCLIP22.07■■□□□ 1.12
COLCA2-202ENST00000526216 ITSN2Q9NZM3 1697 aa22.06■■□□□ 1.12
COLCA2-202ENST00000526216 PTPN23Q9H3S7 1636 aa22.05■■□□□ 1.12
COLCA2-202ENST00000526216 KCNH8Q96L42 1107 aa22.05■■□□□ 1.12
COLCA2-202ENST00000526216 TCOF1Q13428 1488 aaKnown RBP22.04■■□□□ 1.12
COLCA2-202ENST00000526216 PREX2Q70Z35 1606 aa22.04■■□□□ 1.12
COLCA2-202ENST00000526216 MIA2Q96PC5 1412 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms