RNA–Protein interactions for RNA: ENST00000526216.1

COLCA2-202, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-202ENST00000526216 CTTNBP2Q8WZ74 1663 aa23.28■■□□□ 1.32
COLCA2-202ENST00000526216 CEP162Q5TB80 1403 aa23.26■■□□□ 1.31
COLCA2-202ENST00000526216 CHD1O14646 1710 aa23.26■■□□□ 1.31
COLCA2-202ENST00000526216 CEP170Q5SW79 1584 aa23.23■■□□□ 1.31
COLCA2-202ENST00000526216 CHMP7Q8WUX9 453 aaPredicted RBP23.21■■□□□ 1.31
COLCA2-202ENST00000526216 NUP160Q12769 1436 aa23.19■■□□□ 1.3
COLCA2-202ENST00000526216 FBLN2P98095 1184 aa23.18■■□□□ 1.3
COLCA2-202ENST00000526216 FOXD1Q16676 465 aa23.17■■□□□ 1.3
COLCA2-202ENST00000526216 CLIP1P30622 1438 aa23.15■■□□□ 1.3
COLCA2-202ENST00000526216 IQGAP2Q13576 1575 aa23.14■■□□□ 1.29
COLCA2-202ENST00000526216 KIAA0586Q9BVV6 1533 aa23.12■■□□□ 1.29
COLCA2-202ENST00000526216 RANGAP1P46060 587 aaPredicted RBP23.1■■□□□ 1.29
COLCA2-202ENST00000526216 ARHGAP35Q9NRY4 1499 aa23.1■■□□□ 1.29
COLCA2-202ENST00000526216 ARAP1Q96P48 1450 aa23.07■■□□□ 1.28
COLCA2-202ENST00000526216 SAMD9Q5K651 1589 aa23.06■■□□□ 1.28
COLCA2-202ENST00000526216 UGGT2Q9NYU1 1516 aa23.04■■□□□ 1.28
COLCA2-202ENST00000526216 EFCAB5A4FU69 1503 aa23.03■■□□□ 1.28
COLCA2-202ENST00000526216 CLASP1Q7Z460 1538 aa23.02■■□□□ 1.28
COLCA2-202ENST00000526216 DISP1Q96F81 1524 aa22.96■■□□□ 1.27
COLCA2-202ENST00000526216 FHOD3Q2V2M9 1422 aa22.95■■□□□ 1.27
COLCA2-202ENST00000526216 SHROOM2Q13796 1616 aa22.95■■□□□ 1.26
COLCA2-202ENST00000526216 KIAA0556O60303 1618 aa22.94■■□□□ 1.26
COLCA2-202ENST00000526216 P3H3Q8IVL6 736 aa22.92■■□□□ 1.26
COLCA2-202ENST00000526216 VPS8Q8N3P4 1428 aa22.91■■□□□ 1.26
COLCA2-202ENST00000526216 JPH4Q96JJ6 628 aa22.9■■□□□ 1.26
COLCA2-202ENST00000526216 ERCC6L2Q5T890 1561 aa22.84■■□□□ 1.25
COLCA2-202ENST00000526216 PRG4Q92954 1404 aaPredicted RBP22.83■■□□□ 1.25
COLCA2-202ENST00000526216 OSCARQ8IYS5 282 aa22.81■■□□□ 1.24
COLCA2-202ENST00000526216 PCF11O94913 1555 aaKnown RBP22.8■■□□□ 1.24
COLCA2-202ENST00000526216 CARMIL2Q6F5E8 1435 aa22.78■■□□□ 1.24
COLCA2-202ENST00000526216 FMN1Q68DA7 1419 aa22.76■■□□□ 1.23
COLCA2-202ENST00000526216 CASKIN1Q8WXD9 1431 aa22.72■■□□□ 1.23
COLCA2-202ENST00000526216 FYCO1Q9BQS8 1478 aa22.71■■□□□ 1.23
COLCA2-202ENST00000526216 LRRIQ1Q96JM4 1722 aa22.68■■□□□ 1.22
COLCA2-202ENST00000526216 TTBK1Q5TCY1 1321 aaPredicted RBP22.65■■□□□ 1.22
COLCA2-202ENST00000526216 RAPGEF6Q8TEU7 1601 aa22.64■■□□□ 1.22
COLCA2-202ENST00000526216 ABCA8O94911 1581 aa22.64■■□□□ 1.21
COLCA2-202ENST00000526216 PLB1Q6P1J6 1458 aa22.63■■□□□ 1.21
COLCA2-202ENST00000526216 DNAJC5Q9H3Z4 198 aa22.63■■□□□ 1.21
COLCA2-202ENST00000526216 PTPRGP23470 1445 aa22.63■■□□□ 1.21
COLCA2-202ENST00000526216 HECW1Q76N89 1606 aa22.62■■□□□ 1.21
COLCA2-202ENST00000526216 CFAP43Q8NDM7 1665 aa22.62■■□□□ 1.21
COLCA2-202ENST00000526216 TIAM1Q13009 1591 aa22.61■■□□□ 1.21
COLCA2-202ENST00000526216 NUP153P49790 1475 aaKnown RBP22.59■■□□□ 1.21
COLCA2-202ENST00000526216 MAP3K1Q13233 1512 aa22.59■■□□□ 1.21
COLCA2-202ENST00000526216 PPARGC1BQ86YN6 1023 aaKnown RBP22.58■■□□□ 1.21
COLCA2-202ENST00000526216 ARHGEF11O15085 1522 aa22.55■■□□□ 1.2
COLCA2-202ENST00000526216 ATP1B4Q9UN42 357 aaPredicted RBP22.55■■□□□ 1.2
COLCA2-202ENST00000526216 EPRSP07814 1512 aaKnown RBP22.54■■□□□ 1.2
COLCA2-202ENST00000526216 CDK13Q14004 1512 aaKnown RBP22.54■■□□□ 1.2
COLCA2-202ENST00000526216 KANK4Q5T7N3 995 aaPredicted RBP22.53■■□□□ 1.2
COLCA2-202ENST00000526216 UACAQ9BZF9 1416 aa22.51■■□□□ 1.19
COLCA2-202ENST00000526216 CCDC18Q5T9S5 1454 aa22.51■■□□□ 1.19
COLCA2-202ENST00000526216 ABCC2Q92887 1545 aa22.49■■□□□ 1.19
COLCA2-202ENST00000526216 RIMBP3CA6NJZ7 1639 aa22.49■■□□□ 1.19
COLCA2-202ENST00000526216 RIMBP3BA6NNM3 1639 aa22.49■■□□□ 1.19
COLCA2-202ENST00000526216 RIMBP3Q9UFD9 1639 aa22.49■■□□□ 1.19
COLCA2-202ENST00000526216 APLP2Q06481 763 aa22.49■■□□□ 1.19
COLCA2-202ENST00000526216 MAGI3Q5TCQ9 1506 aa22.49■■□□□ 1.19
COLCA2-202ENST00000526216 LRRC9Q6ZRR7 1453 aa22.48■■□□□ 1.19
COLCA2-202ENST00000526216 ARID3CA6NKF2 412 aa22.46■■□□□ 1.19
COLCA2-202ENST00000526216 UHRF1BP1LA0JNW5 1464 aa22.46■■□□□ 1.19
COLCA2-202ENST00000526216 ADCY10Q96PN6 1610 aa22.45■■□□□ 1.18
COLCA2-202ENST00000526216 ATP10BO94823 1461 aa22.44■■□□□ 1.18
COLCA2-202ENST00000526216 EHBP1L1Q8N3D4 1523 aa22.38■■□□□ 1.17
COLCA2-202ENST00000526216 KDM5BQ9UGL1 1544 aa22.37■■□□□ 1.17
COLCA2-202ENST00000526216 ZCCHC11Q5TAX3 1644 aaKnown RBP22.36■■□□□ 1.17
COLCA2-202ENST00000526216 MTUS2Q5JR59 1369 aa22.33■■□□□ 1.17
COLCA2-202ENST00000526216 TROQ12816 1431 aaPredicted RBP22.3■■□□□ 1.16
COLCA2-202ENST00000526216 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.29■■□□□ 1.16
COLCA2-202ENST00000526216 HNRNPUL2Q1KMD3 747 aaKnown RBP22.29■■□□□ 1.16
COLCA2-202ENST00000526216 SUPT6HQ7KZ85 1726 aaKnown RBP22.28■■□□□ 1.16
COLCA2-202ENST00000526216 NCOA2Q15596 1464 aa22.28■■□□□ 1.16
COLCA2-202ENST00000526216 PHLDB1Q86UU1 1377 aa22.27■■□□□ 1.16
COLCA2-202ENST00000526216 KIF14Q15058 1648 aa22.27■■□□□ 1.15
COLCA2-202ENST00000526216 CYB5RLQ6IPT4 315 aa22.24■■□□□ 1.15
COLCA2-202ENST00000526216 CDK11AQ9UQ88 783 aaPredicted RBP22.23■■□□□ 1.15
COLCA2-202ENST00000526216 TRIM26Q12899 539 aaPredicted RBP22.22■■□□□ 1.15
COLCA2-202ENST00000526216 MSH5O43196 834 aa22.2■■□□□ 1.14
COLCA2-202ENST00000526216 PLEKHD1A6NEE1 506 aa22.19■■□□□ 1.14
COLCA2-202ENST00000526216 ABCC10Q5T3U5 1492 aa22.18■■□□□ 1.14
COLCA2-202ENST00000526216 RRBP1Q9P2E9 1410 aaKnown RBP22.18■■□□□ 1.14
COLCA2-202ENST00000526216 MYOM3Q5VTT5 1437 aa22.14■■□□□ 1.14
COLCA2-202ENST00000526216 ASXL2Q76L83 1435 aa22.14■■□□□ 1.14
COLCA2-202ENST00000526216 WDR7Q9Y4E6 1490 aa22.14■■□□□ 1.14
COLCA2-202ENST00000526216 TTC37Q6PGP7 1564 aa22.12■■□□□ 1.13
COLCA2-202ENST00000526216 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.12■■□□□ 1.13
COLCA2-202ENST00000526216 PCGF6Q9BYE7 350 aa22.11■■□□□ 1.13
COLCA2-202ENST00000526216 FGD6Q6ZV73 1430 aa22.11■■□□□ 1.13
COLCA2-202ENST00000526216 CCNB3Q8WWL7 1395 aa22.09■■□□□ 1.13
COLCA2-202ENST00000526216 GPATCH8Q9UKJ3 1502 aaKnown RBP22.09■■□□□ 1.13
COLCA2-202ENST00000526216 CDC42BPAQ5VT25 1732 aa22.09■■□□□ 1.13
COLCA2-202ENST00000526216 MAPKBP1O60336 1514 aa22.08■■□□□ 1.13
COLCA2-202ENST00000526216 NPM1P06748 294 aaKnown RBP eCLIP22.07■■□□□ 1.12
COLCA2-202ENST00000526216 ITSN2Q9NZM3 1697 aa22.06■■□□□ 1.12
COLCA2-202ENST00000526216 PTPN23Q9H3S7 1636 aa22.05■■□□□ 1.12
COLCA2-202ENST00000526216 KCNH8Q96L42 1107 aa22.05■■□□□ 1.12
COLCA2-202ENST00000526216 TCOF1Q13428 1488 aaKnown RBP22.04■■□□□ 1.12
COLCA2-202ENST00000526216 PREX2Q70Z35 1606 aa22.04■■□□□ 1.12
COLCA2-202ENST00000526216 MIA2Q96PC5 1412 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 150.4 ms