RNA–Protein interactions for RNA: ENST00000526216.1

COLCA2-202, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-202ENST00000526216 NISCHQ9Y2I1 1504 aa33.73■■■□□ 2.99
COLCA2-202ENST00000526216 CCDC180Q9P1Z9 1646 aa29.62■■■□□ 2.33
COLCA2-202ENST00000526216 AEBP2Q6ZN18 517 aaPredicted RBP28.67■■■□□ 2.18
COLCA2-202ENST00000526216 ZCCHC6Q5VYS8 1495 aaKnown RBP28.29■■■□□ 2.12
COLCA2-202ENST00000526216 ABCC9O60706 1549 aa28.29■■■□□ 2.12
COLCA2-202ENST00000526216 DCAF1Q9Y4B6 1507 aa27.91■■■□□ 2.06
COLCA2-202ENST00000526216 DCAF8L2P0C7V8 631 aa27.78■■■□□ 2.04
COLCA2-202ENST00000526216 MYO15BQ96JP2 1530 aa27.71■■■□□ 2.03
COLCA2-202ENST00000526216 NACADO15069 1562 aa27.63■■■□□ 2.01
COLCA2-202ENST00000526216 RB1CC1Q8TDY2 1594 aa27.47■■□□□ 1.99
COLCA2-202ENST00000526216 SHROOM4Q9ULL8 1493 aa27.17■■□□□ 1.94
COLCA2-202ENST00000526216 SCRIBQ14160 1630 aa27.16■■□□□ 1.94
COLCA2-202ENST00000526216 UNC13AQ9UPW8 1703 aa26.98■■□□□ 1.91
COLCA2-202ENST00000526216 BICRAQ9NZM4 1560 aa26.75■■□□□ 1.87
COLCA2-202ENST00000526216 CHIC1Q5VXU3 224 aa26.73■■□□□ 1.87
COLCA2-202ENST00000526216 PABPN1Q86U42 306 aaKnown RBP eCLIP26.56■■□□□ 1.84
COLCA2-202ENST00000526216 CECR2Q9BXF3 1484 aa26.26■■□□□ 1.79
COLCA2-202ENST00000526216 MROH2BQ7Z745 1585 aa26.06■■□□□ 1.76
COLCA2-202ENST00000526216 BAZ1AQ9NRL2 1556 aaPredicted RBP26.05■■□□□ 1.76
COLCA2-202ENST00000526216 SMARCA4P51532 1647 aa26.03■■□□□ 1.76
COLCA2-202ENST00000526216 RSF1Q96T23 1441 aaPredicted RBP26.01■■□□□ 1.75
COLCA2-202ENST00000526216 EIF4G1Q04637 1599 aaKnown RBP25.91■■□□□ 1.74
COLCA2-202ENST00000526216 SUPT5HO00267 1087 aaKnown RBP25.89■■□□□ 1.74
COLCA2-202ENST00000526216 WIZO95785 1651 aa25.83■■□□□ 1.73
COLCA2-202ENST00000526216 PEG3Q9GZU2 1588 aa25.74■■□□□ 1.71
COLCA2-202ENST00000526216 ATAD2BQ9ULI0 1458 aa25.68■■□□□ 1.7
COLCA2-202ENST00000526216 SMARCA2P51531 1590 aa25.62■■□□□ 1.69
COLCA2-202ENST00000526216 CC2D2AQ9P2K1 1620 aa25.62■■□□□ 1.69
COLCA2-202ENST00000526216 TOP2AP11388 1531 aaKnown RBP25.55■■□□□ 1.68
COLCA2-202ENST00000526216 NCAPD3P42695 1498 aa25.5■■□□□ 1.67
COLCA2-202ENST00000526216 BAZ1BQ9UIG0 1483 aaKnown RBP25.47■■□□□ 1.67
COLCA2-202ENST00000526216 HMGXB3Q12766 1538 aa25.46■■□□□ 1.67
COLCA2-202ENST00000526216 DNAJC5BQ9UF47 199 aa25.32■■□□□ 1.64
COLCA2-202ENST00000526216 CCDC88BA6NC98 1476 aa25.26■■□□□ 1.63
COLCA2-202ENST00000526216 CFTRP13569 1480 aa24.84■■□□□ 1.57
COLCA2-202ENST00000526216 CADPSQ9ULU8 1353 aa24.8■■□□□ 1.56
COLCA2-202ENST00000526216 NESP48681 1621 aa24.76■■□□□ 1.55
COLCA2-202ENST00000526216 PRDM2Q13029 1718 aa24.72■■□□□ 1.55
COLCA2-202ENST00000526216 LAMC3Q9Y6N6 1575 aa24.7■■□□□ 1.54
COLCA2-202ENST00000526216 SENP3Q9H4L4 574 aaPredicted RBP24.64■■□□□ 1.54
COLCA2-202ENST00000526216 ABCC8Q09428 1581 aa24.62■■□□□ 1.53
COLCA2-202ENST00000526216 FANCD2Q9BXW9 1451 aa24.54■■□□□ 1.52
COLCA2-202ENST00000526216 KIF21AQ7Z4S6 1674 aa24.47■■□□□ 1.51
COLCA2-202ENST00000526216 WRNQ14191 1432 aaPredicted RBP eCLIP24.46■■□□□ 1.51
COLCA2-202ENST00000526216 PDS5BQ9NTI5 1447 aa24.46■■□□□ 1.51
COLCA2-202ENST00000526216 SYNJ1O43426 1573 aa24.45■■□□□ 1.5
COLCA2-202ENST00000526216 CEP164Q9UPV0 1460 aa24.41■■□□□ 1.5
COLCA2-202ENST00000526216 CUX1P39880 1505 aa24.4■■□□□ 1.5
COLCA2-202ENST00000526216 BIVM-ERCC5R4GMW8 1640 aa24.36■■□□□ 1.49
COLCA2-202ENST00000526216 TOP2BQ02880 1626 aa24.36■■□□□ 1.49
COLCA2-202ENST00000526216 TRIM41Q8WV44 630 aa24.35■■□□□ 1.49
COLCA2-202ENST00000526216 URB2Q14146 1524 aaKnown RBP24.3■■□□□ 1.48
COLCA2-202ENST00000526216 DNMBPQ6XZF7 1577 aa24.28■■□□□ 1.48
COLCA2-202ENST00000526216 TOPBP1Q92547 1522 aa24.26■■□□□ 1.47
COLCA2-202ENST00000526216 ERCC6Q03468 1493 aa24.23■■□□□ 1.47
COLCA2-202ENST00000526216 MRC2Q9UBG0 1479 aa24.23■■□□□ 1.47
COLCA2-202ENST00000526216 THOC2Q8NI27 1593 aaKnown RBP24.2■■□□□ 1.46
COLCA2-202ENST00000526216 FGD5Q6ZNL6 1462 aa24.16■■□□□ 1.46
COLCA2-202ENST00000526216 PHF23Q9BUL5 403 aaPredicted RBP24.15■■□□□ 1.46
COLCA2-202ENST00000526216 WDR62O43379 1518 aa24.14■■□□□ 1.46
COLCA2-202ENST00000526216 POLA1P09884 1462 aaPredicted RBP24.11■■□□□ 1.45
COLCA2-202ENST00000526216 POTEDQ86YR6 584 aa24.09■■□□□ 1.45
COLCA2-202ENST00000526216 SOGA1O94964 1423 aa24.06■■□□□ 1.44
COLCA2-202ENST00000526216 RUSC2Q8N2Y8 1516 aa24.03■■□□□ 1.44
COLCA2-202ENST00000526216 RAD54L2Q9Y4B4 1467 aa24.02■■□□□ 1.44
COLCA2-202ENST00000526216 CUX2O14529 1486 aa23.99■■□□□ 1.43
COLCA2-202ENST00000526216 WDR97A6NE52 1622 aa23.98■■□□□ 1.43
COLCA2-202ENST00000526216 TARBP1Q13395 1621 aaKnown RBP23.96■■□□□ 1.43
COLCA2-202ENST00000526216 ABCA10Q8WWZ4 1543 aa23.94■■□□□ 1.42
COLCA2-202ENST00000526216 FAM9AQ8IZU1 332 aaPredicted RBP23.92■■□□□ 1.42
COLCA2-202ENST00000526216 EEA1Q15075 1411 aa23.88■■□□□ 1.41
COLCA2-202ENST00000526216 IFT140Q96RY7 1462 aa23.86■■□□□ 1.41
COLCA2-202ENST00000526216 KIF27Q86VH2 1401 aa23.85■■□□□ 1.41
COLCA2-202ENST00000526216 ABCA5Q8WWZ7 1642 aa23.82■■□□□ 1.4
COLCA2-202ENST00000526216 ZNF608Q9ULD9 1512 aaPredicted RBP23.78■■□□□ 1.4
COLCA2-202ENST00000526216 TDRD9Q8NDG6 1382 aaKnown RBP23.78■■□□□ 1.4
COLCA2-202ENST00000526216 CSRNP3Q8WYN3 585 aa23.76■■□□□ 1.39
COLCA2-202ENST00000526216 GAPVD1Q14C86 1478 aa23.71■■□□□ 1.39
COLCA2-202ENST00000526216 IGF1RP08069 1367 aa23.71■■□□□ 1.39
COLCA2-202ENST00000526216 AQRO60306 1485 aaKnown RBP eCLIP23.71■■□□□ 1.39
COLCA2-202ENST00000526216 EIF4G3O43432 1585 aaKnown RBP23.7■■□□□ 1.38
COLCA2-202ENST00000526216 PBRM1Q86U86 1689 aa23.67■■□□□ 1.38
COLCA2-202ENST00000526216 LOC105371045A0A1W2PR82 267 aa23.67■■□□□ 1.38
COLCA2-202ENST00000526216 PRXQ9BXM0 1461 aa23.66■■□□□ 1.38
COLCA2-202ENST00000526216 KIF21BO75037 1637 aa23.66■■□□□ 1.38
COLCA2-202ENST00000526216 ERICH3Q5RHP9 1530 aa23.64■■□□□ 1.38
COLCA2-202ENST00000526216 GRIN2BQ13224 1484 aa23.59■■□□□ 1.37
COLCA2-202ENST00000526216 RAPGEF2Q9Y4G8 1499 aa23.59■■□□□ 1.37
COLCA2-202ENST00000526216 EHMT2Q96KQ7 1210 aa23.59■■□□□ 1.37
COLCA2-202ENST00000526216 CUL7Q14999 1698 aa23.58■■□□□ 1.37
COLCA2-202ENST00000526216 GOLGA3Q08378 1498 aa23.56■■□□□ 1.36
COLCA2-202ENST00000526216 CARMIL1Q5VZK9 1371 aa23.56■■□□□ 1.36
COLCA2-202ENST00000526216 ADAMTS12P58397 1594 aa23.53■■□□□ 1.36
COLCA2-202ENST00000526216 SNAPC4Q5SXM2 1469 aa23.51■■□□□ 1.35
COLCA2-202ENST00000526216 FHAD1B1AJZ9 1412 aa23.45■■□□□ 1.34
COLCA2-202ENST00000526216 MAGI1Q96QZ7 1491 aaPredicted RBP23.44■■□□□ 1.34
COLCA2-202ENST00000526216 TNIKQ9UKE5 1360 aa23.4■■□□□ 1.34
COLCA2-202ENST00000526216 UBTFP17480 764 aaKnown RBP23.36■■□□□ 1.33
COLCA2-202ENST00000526216 SYNJ2O15056 1496 aa23.35■■□□□ 1.33
COLCA2-202ENST00000526216 GRIN2AQ12879 1464 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms