RNA–Protein interactions for RNA: ENST00000525523.1

AC055860.1-201, humanhuman

TSL 5 BASIC

Gene AC055860.1, Length 688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055860.1-201ENST00000525523 SHROOM2Q13796 1616 aa14.07□□□□□ -0.16
AC055860.1-201ENST00000525523 KDM6BO15054 1643 aa14.06□□□□□ -0.16
AC055860.1-201ENST00000525523 ABCA5Q8WWZ7 1642 aa14.05□□□□□ -0.16
AC055860.1-201ENST00000525523 DIP2BQ9P265 1576 aa14.01□□□□□ -0.17
AC055860.1-201ENST00000525523 CUX1P39880 1505 aa14.01□□□□□ -0.17
AC055860.1-201ENST00000525523 GRIN2AQ12879 1464 aa14.01□□□□□ -0.17
AC055860.1-201ENST00000525523 KDM4FA0A1W2PPD8 638 aa14□□□□□ -0.17
AC055860.1-201ENST00000525523 ADAMTS12P58397 1594 aa14□□□□□ -0.17
AC055860.1-201ENST00000525523 ABCC10Q5T3U5 1492 aa13.99□□□□□ -0.17
AC055860.1-201ENST00000525523 MAPKBP1O60336 1514 aa13.99□□□□□ -0.17
AC055860.1-201ENST00000525523 NUP160Q12769 1436 aa13.98□□□□□ -0.17
AC055860.1-201ENST00000525523 ABCA10Q8WWZ4 1543 aa13.95□□□□□ -0.18
AC055860.1-201ENST00000525523 HOXD11P31277 338 aaPredicted RBP13.93□□□□□ -0.18
AC055860.1-201ENST00000525523 TSPOAP1O95153 1857 aa13.93□□□□□ -0.18
AC055860.1-201ENST00000525523 HECW2Q9P2P5 1572 aa13.92□□□□□ -0.18
AC055860.1-201ENST00000525523 CNKSR2Q8WXI2 1034 aa13.92□□□□□ -0.18
AC055860.1-201ENST00000525523 FAM69CQ0P6D2 419 aa13.9□□□□□ -0.18
AC055860.1-201ENST00000525523 ADGRL1O94910 1474 aa13.87□□□□□ -0.19
AC055860.1-201ENST00000525523 ADCY10Q96PN6 1610 aa13.86□□□□□ -0.19
AC055860.1-201ENST00000525523 PRG4Q92954 1404 aaPredicted RBP13.84□□□□□ -0.19
AC055860.1-201ENST00000525523 FHAD1B1AJZ9 1412 aa13.83□□□□□ -0.2
AC055860.1-201ENST00000525523 RUSC2Q8N2Y8 1516 aa13.83□□□□□ -0.2
AC055860.1-201ENST00000525523 NPM1P06748 294 aaKnown RBP eCLIP13.81□□□□□ -0.2
AC055860.1-201ENST00000525523 ERICH3Q5RHP9 1530 aa13.8□□□□□ -0.2
AC055860.1-201ENST00000525523 RNF216Q9NWF9 866 aaPredicted RBP13.8□□□□□ -0.2
AC055860.1-201ENST00000525523 DCAF8L1A6NGE4 600 aa13.78□□□□□ -0.2
AC055860.1-201ENST00000525523 PPRC1Q5VV67 1664 aaKnown RBP13.78□□□□□ -0.2
AC055860.1-201ENST00000525523 FBXO41Q8TF61 875 aa13.75□□□□□ -0.21
AC055860.1-201ENST00000525523 WRNQ14191 1432 aaPredicted RBP eCLIP13.73□□□□□ -0.21
AC055860.1-201ENST00000525523 BIVM-ERCC5R4GMW8 1640 aa13.73□□□□□ -0.21
AC055860.1-201ENST00000525523 GLI2P10070 1586 aa13.71□□□□□ -0.21
AC055860.1-201ENST00000525523 TOP2BQ02880 1626 aa13.71□□□□□ -0.22
AC055860.1-201ENST00000525523 JPH4Q96JJ6 628 aa13.7□□□□□ -0.22
AC055860.1-201ENST00000525523 MAP3K4Q9Y6R4 1608 aa13.64□□□□□ -0.23
AC055860.1-201ENST00000525523 CUL7Q14999 1698 aa13.63□□□□□ -0.23
AC055860.1-201ENST00000525523 PLB1Q6P1J6 1458 aa13.62□□□□□ -0.23
AC055860.1-201ENST00000525523 TEX14Q8IWB6 1497 aa13.62□□□□□ -0.23
AC055860.1-201ENST00000525523 LMTK3Q96Q04 1460 aa13.62□□□□□ -0.23
AC055860.1-201ENST00000525523 NCBP3Q53F19 620 aaKnown RBP13.62□□□□□ -0.23
AC055860.1-201ENST00000525523 ABCC2Q92887 1545 aa13.62□□□□□ -0.23
AC055860.1-201ENST00000525523 ASXL2Q76L83 1435 aa13.6□□□□□ -0.23
AC055860.1-201ENST00000525523 CACNB1Q02641 598 aaPredicted RBP13.59□□□□□ -0.23
AC055860.1-201ENST00000525523 KIAA0586Q9BVV6 1533 aa13.59□□□□□ -0.23
AC055860.1-201ENST00000525523 COL17A1Q9UMD9 1497 aaPredicted RBP13.58□□□□□ -0.24
AC055860.1-201ENST00000525523 RNF39Q9H2S5 420 aa13.56□□□□□ -0.24
AC055860.1-201ENST00000525523 PTPRGP23470 1445 aa13.53□□□□□ -0.24
AC055860.1-201ENST00000525523 UHRF1BP1LA0JNW5 1464 aa13.53□□□□□ -0.24
AC055860.1-201ENST00000525523 EPRSP07814 1512 aaKnown RBP13.53□□□□□ -0.24
AC055860.1-201ENST00000525523 KIF21BO75037 1637 aa13.53□□□□□ -0.24
AC055860.1-201ENST00000525523 ZCCHC11Q5TAX3 1644 aaKnown RBP13.49□□□□□ -0.25
AC055860.1-201ENST00000525523 CARMIL2Q6F5E8 1435 aa13.47□□□□□ -0.25
AC055860.1-201ENST00000525523 TNIKQ9UKE5 1360 aa13.47□□□□□ -0.25
AC055860.1-201ENST00000525523 CFAP43Q8NDM7 1665 aa13.47□□□□□ -0.25
AC055860.1-201ENST00000525523 NPM3O75607 178 aaKnown RBP13.47□□□□□ -0.25
AC055860.1-201ENST00000525523 PCF11O94913 1555 aaKnown RBP13.46□□□□□ -0.25
AC055860.1-201ENST00000525523 KDM5BQ9UGL1 1544 aa13.46□□□□□ -0.25
AC055860.1-201ENST00000525523 SOCS7O14512 581 aa13.44□□□□□ -0.26
AC055860.1-201ENST00000525523 UACAQ9BZF9 1416 aa13.44□□□□□ -0.26
AC055860.1-201ENST00000525523 ADAMTSL3P82987 1691 aa13.44□□□□□ -0.26
AC055860.1-201ENST00000525523 IQGAP2Q13576 1575 aa13.43□□□□□ -0.26
AC055860.1-201ENST00000525523 PTPRMP28827 1452 aa13.42□□□□□ -0.26
AC055860.1-201ENST00000525523 MAGI3Q5TCQ9 1506 aa13.41□□□□□ -0.26
AC055860.1-201ENST00000525523 WDR7Q9Y4E6 1490 aa13.41□□□□□ -0.26
AC055860.1-201ENST00000525523 SPATA31D1Q6ZQQ2 1576 aa13.38□□□□□ -0.27
AC055860.1-201ENST00000525523 DISP3Q9P2K9 1392 aa13.38□□□□□ -0.27
AC055860.1-201ENST00000525523 TTBK1Q5TCY1 1321 aaPredicted RBP13.38□□□□□ -0.27
AC055860.1-201ENST00000525523 BCORL1Q5H9F3 1711 aa13.37□□□□□ -0.27
AC055860.1-201ENST00000525523 MADDQ8WXG6 1647 aa13.35□□□□□ -0.27
AC055860.1-201ENST00000525523 DISP1Q96F81 1524 aa13.34□□□□□ -0.27
AC055860.1-201ENST00000525523 ILDR2Q71H61 639 aa13.34□□□□□ -0.27
AC055860.1-201ENST00000525523 CD109Q6YHK3 1445 aa13.33□□□□□ -0.28
AC055860.1-201ENST00000525523 KIAA0556O60303 1618 aa13.33□□□□□ -0.28
AC055860.1-201ENST00000525523 C1QBPQ07021 282 aaKnown RBP13.33□□□□□ -0.28
AC055860.1-201ENST00000525523 KIF27Q86VH2 1401 aa13.32□□□□□ -0.28
AC055860.1-201ENST00000525523 ARAP3Q8WWN8 1544 aa13.32□□□□□ -0.28
AC055860.1-201ENST00000525523 IGF1RP08069 1367 aa13.32□□□□□ -0.28
AC055860.1-201ENST00000525523 RIMS1Q86UR5 1692 aaKnown RBP13.31□□□□□ -0.28
AC055860.1-201ENST00000525523 UGGT2Q9NYU1 1516 aa13.29□□□□□ -0.28
AC055860.1-201ENST00000525523 CERKQ8TCT0 537 aa13.27□□□□□ -0.29
AC055860.1-201ENST00000525523 CARMIL1Q5VZK9 1371 aa13.24□□□□□ -0.29
AC055860.1-201ENST00000525523 ARHGEF40Q8TER5 1519 aa13.23□□□□□ -0.29
AC055860.1-201ENST00000525523 KCNA4P22459 653 aa13.22□□□□□ -0.29
AC055860.1-201ENST00000525523 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.22□□□□□ -0.29
AC055860.1-201ENST00000525523 ABCA8O94911 1581 aa13.21□□□□□ -0.29
AC055860.1-201ENST00000525523 FRMPD1Q5SYB0 1578 aa13.21□□□□□ -0.29
AC055860.1-201ENST00000525523 ABCA9Q8IUA7 1624 aa13.21□□□□□ -0.3
AC055860.1-201ENST00000525523 PHLDB1Q86UU1 1377 aa13.2□□□□□ -0.3
AC055860.1-201ENST00000525523 CTTNBP2Q8WZ74 1663 aa13.2□□□□□ -0.3
AC055860.1-201ENST00000525523 PREX1Q8TCU6 1659 aa13.18□□□□□ -0.3
AC055860.1-201ENST00000525523 FER1L4A9Z1Z3 1794 aa13.17□□□□□ -0.3
AC055860.1-201ENST00000525523 NEO1Q92859 1461 aa13.16□□□□□ -0.3
AC055860.1-201ENST00000525523 TTC37Q6PGP7 1564 aa13.15□□□□□ -0.3
AC055860.1-201ENST00000525523 HSPA2P54652 639 aa13.15□□□□□ -0.3
AC055860.1-201ENST00000525523 ARID4BQ4LE39 1312 aaPredicted RBP13.14□□□□□ -0.31
AC055860.1-201ENST00000525523 KCNH8Q96L42 1107 aa13.14□□□□□ -0.31
AC055860.1-201ENST00000525523 FANCAO15360 1455 aa13.14□□□□□ -0.31
AC055860.1-201ENST00000525523 RICTORQ6R327 1708 aa13.13□□□□□ -0.31
AC055860.1-201ENST00000525523 GOLGA3Q08378 1498 aa13.13□□□□□ -0.31
AC055860.1-201ENST00000525523 POGZQ7Z3K3 1410 aa13.12□□□□□ -0.31
AC055860.1-201ENST00000525523 RAPGEF2Q9Y4G8 1499 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms