RNA–Protein interactions for RNA: ENST00000525523.1

AC055860.1-201, humanhuman

TSL 5 BASIC

Gene AC055860.1, Length 688 nt, Biotype processed transcript.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055860.1-201ENST00000525523 QKIQ96PU8 341 aaKnown RBP eCLIP7.2□□□□□ -1.263e-23■■■■■ 130.9
AC055860.1-201ENST00000525523 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.44□□□□□ -1.062e-20■□□□□ 10.3
AC055860.1-201ENST00000525523 EFTUD2Q15029 972 aaKnown RBP eCLIP6.97□□□□□ -1.291e-16■■□□□ 12.4
AC055860.1-201ENST00000525523 DKC1O60832 514 aaKnown RBP eCLIP8.09□□□□□ -1.113e-15■■■■■ 68.7
AC055860.1-201ENST00000525523 PCBP2Q15366 365 aaKnown RBP eCLIP7.02□□□□□ -1.293e-13■■■■■ 54.8
AC055860.1-201ENST00000525523 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.21□□□□□ -0.945e-12■■□□□ 12.5
AC055860.1-201ENST00000525523 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.06□□□□□ -1.282e-11■■■■■ 71.9
AC055860.1-201ENST00000525523 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.08□□□□□ -1.284e-11■■■■■ 30.9
AC055860.1-201ENST00000525523 PPIGQ13427 754 aaKnown RBP eCLIP9.2□□□□□ -0.941e-10■□□□□ 9.5
AC055860.1-201ENST00000525523 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.38□□□□□ -0.753e-10■□□□□ 10.5
AC055860.1-201ENST00000525523 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.36□□□□□ -0.432e-9■■■■■ 39.6
AC055860.1-201ENST00000525523 PRPF4O43172 522 aaKnown RBP eCLIP6.97□□□□□ -1.291e-8■■■■□ 24.8
AC055860.1-201ENST00000525523 SF3B1O75533 1304 aaKnown RBP eCLIP8.25□□□□□ -1.094e-8■■■■■ 68.9
AC055860.1-201ENST00000525523 FUSP35637 526 aaKnown RBP eCLIP5.1□□□□□ -1.594e-8■■■■□ 20.5
AC055860.1-201ENST00000525523 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.83□□□□□ -1.161e-7■■■■■ 28.7
AC055860.1-201ENST00000525523 KHSRPQ92945 711 aaKnown RBP eCLIP9.28□□□□□ -0.922e-7■■■■□ 20.4
AC055860.1-201ENST00000525523 SF3A3Q12874 501 aaKnown RBP eCLIP6.72□□□□□ -1.333e-7■■■□□ 17.2
AC055860.1-201ENST00000525523 NCBP2P52298 156 aaKnown RBP eCLIP6.62□□□□□ -1.353e-7■□□□□ 11
AC055860.1-201ENST00000525523 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.89□□□□□ -1.314e-7■■■□□ 17.8
AC055860.1-201ENST00000525523 GTF2F1P35269 517 aaKnown RBP eCLIP8.76□□□□□ -1.014e-7■■■■■ 39.6
AC055860.1-201ENST00000525523 CDC40O60508 579 aaKnown RBP eCLIP6.94□□□□□ -1.35e-7■■■□□ 15.4
AC055860.1-201ENST00000525523 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.67□□□□□ -1.025e-7■■■■■ 29.1
AC055860.1-201ENST00000525523 TAF15Q92804 592 aaKnown RBP eCLIP6.3□□□□□ -1.46e-7■■■□□ 17.2
AC055860.1-201ENST00000525523 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.25□□□□□ -1.257e-7■□□□□ 11
AC055860.1-201ENST00000525523 RBFOX2O43251 390 aaKnown RBP eCLIP5.75□□□□□ -1.497e-7■■■■□ 22.6
AC055860.1-201ENST00000525523 HNRNPMP52272 730 aaKnown RBP eCLIP12.25□□□□□ -0.457e-7■■■□□ 17
AC055860.1-201ENST00000525523 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.36□□□□□ -1.231e-6■□□□□ 9.6
AC055860.1-201ENST00000525523 U2AF2P26368 475 aaKnown RBP eCLIP8.05□□□□□ -1.122e-6■□□□□ 9.6
AC055860.1-201ENST00000525523 TARDBPQ13148 414 aaKnown RBP eCLIP7.91□□□□□ -1.143e-6■■■■□ 20.8
AC055860.1-201ENST00000525523 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.08□□□□□ -1.283e-6■□□□□ 9
AC055860.1-201ENST00000525523 SRSF1Q07955 248 aaKnown RBP eCLIP8.11□□□□□ -1.114e-6■■□□□ 12
AC055860.1-201ENST00000525523 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.78□□□□□ -1.164e-6■■■■■ 111.8
Retrieved 32 of 32 RNA–protein pairs in 11.6 ms