RNA–Protein interactions for RNA: ENST00000525523.1

AC055860.1-201, humanhuman

TSL 5 BASIC

Gene AC055860.1, Length 688 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055860.1-201ENST00000525523 AEBP2Q6ZN18 517 aaPredicted RBP21.39■■□□□ 1.01
AC055860.1-201ENST00000525523 CHIC1Q5VXU3 224 aa20.28■□□□□ 0.84
AC055860.1-201ENST00000525523 NISCHQ9Y2I1 1504 aa19.33■□□□□ 0.68
AC055860.1-201ENST00000525523 SENP3Q9H4L4 574 aaPredicted RBP18.17■□□□□ 0.5
AC055860.1-201ENST00000525523 ABCC9O60706 1549 aa18.17■□□□□ 0.5
AC055860.1-201ENST00000525523 PHF23Q9BUL5 403 aaPredicted RBP17.97■□□□□ 0.47
AC055860.1-201ENST00000525523 CCDC180Q9P1Z9 1646 aa17.79■□□□□ 0.44
AC055860.1-201ENST00000525523 DNAJC5BQ9UF47 199 aa17.43■□□□□ 0.38
AC055860.1-201ENST00000525523 RB1CC1Q8TDY2 1594 aa17.15■□□□□ 0.34
AC055860.1-201ENST00000525523 FOXD1Q16676 465 aa16.98■□□□□ 0.31
AC055860.1-201ENST00000525523 NACADO15069 1562 aa16.86■□□□□ 0.29
AC055860.1-201ENST00000525523 UNC13AQ9UPW8 1703 aa16.82■□□□□ 0.28
AC055860.1-201ENST00000525523 PABPN1Q86U42 306 aaKnown RBP eCLIP16.69■□□□□ 0.26
AC055860.1-201ENST00000525523 BICRAQ9NZM4 1560 aa16.62■□□□□ 0.25
AC055860.1-201ENST00000525523 DNAJC5Q9H3Z4 198 aa16.54■□□□□ 0.24
AC055860.1-201ENST00000525523 SHROOM4Q9ULL8 1493 aa16.47■□□□□ 0.23
AC055860.1-201ENST00000525523 CC2D2AQ9P2K1 1620 aa16.46■□□□□ 0.23
AC055860.1-201ENST00000525523 CECR2Q9BXF3 1484 aa16.46■□□□□ 0.23
AC055860.1-201ENST00000525523 MYO15BQ96JP2 1530 aa16.45■□□□□ 0.22
AC055860.1-201ENST00000525523 DCAF8L2P0C7V8 631 aa16.36■□□□□ 0.21
AC055860.1-201ENST00000525523 EIF4G1Q04637 1599 aaKnown RBP16.29■□□□□ 0.2
AC055860.1-201ENST00000525523 PLPPR3Q6T4P5 718 aa16.17■□□□□ 0.18
AC055860.1-201ENST00000525523 SCRIBQ14160 1630 aa16.05■□□□□ 0.16
AC055860.1-201ENST00000525523 CUX2O14529 1486 aa16.03■□□□□ 0.16
AC055860.1-201ENST00000525523 DCAF1Q9Y4B6 1507 aa16■□□□□ 0.15
AC055860.1-201ENST00000525523 ZCCHC6Q5VYS8 1495 aaKnown RBP15.93■□□□□ 0.14
AC055860.1-201ENST00000525523 PPP6R1Q9UPN7 881 aa15.92■□□□□ 0.14
AC055860.1-201ENST00000525523 ADRA2BP18089 450 aa15.85■□□□□ 0.13
AC055860.1-201ENST00000525523 MSH5O43196 834 aa15.84■□□□□ 0.13
AC055860.1-201ENST00000525523 PIAS4Q8N2W9 510 aaPredicted RBP15.82■□□□□ 0.12
AC055860.1-201ENST00000525523 ERCC6Q03468 1493 aa15.79■□□□□ 0.12
AC055860.1-201ENST00000525523 THOC2Q8NI27 1593 aaKnown RBP15.54■□□□□ 0.08
AC055860.1-201ENST00000525523 TRIM41Q8WV44 630 aa15.53■□□□□ 0.08
AC055860.1-201ENST00000525523 NCAPD3P42695 1498 aa15.5■□□□□ 0.07
AC055860.1-201ENST00000525523 POTEDQ86YR6 584 aa15.48■□□□□ 0.07
AC055860.1-201ENST00000525523 HMGXB3Q12766 1538 aa15.44■□□□□ 0.06
AC055860.1-201ENST00000525523 NESP48681 1621 aa15.42■□□□□ 0.06
AC055860.1-201ENST00000525523 SMARCA2P51531 1590 aa15.37■□□□□ 0.05
AC055860.1-201ENST00000525523 ATAD2BQ9ULI0 1458 aa15.36■□□□□ 0.05
AC055860.1-201ENST00000525523 LAMC3Q9Y6N6 1575 aa15.36■□□□□ 0.05
AC055860.1-201ENST00000525523 KIF21AQ7Z4S6 1674 aa15.35■□□□□ 0.05
AC055860.1-201ENST00000525523 SMARCA4P51532 1647 aa15.28■□□□□ 0.04
AC055860.1-201ENST00000525523 BAZ1AQ9NRL2 1556 aaPredicted RBP15.26■□□□□ 0.03
AC055860.1-201ENST00000525523 BAZ1BQ9UIG0 1483 aaKnown RBP15.22■□□□□ 0.03
AC055860.1-201ENST00000525523 PDS5BQ9NTI5 1447 aa15.2■□□□□ 0.02
AC055860.1-201ENST00000525523 WDR62O43379 1518 aa15.16■□□□□ 0.02
AC055860.1-201ENST00000525523 PEG3Q9GZU2 1588 aa15.15■□□□□ 0.02
AC055860.1-201ENST00000525523 MRC2Q9UBG0 1479 aa15.14■□□□□ 0.01
AC055860.1-201ENST00000525523 RIMBP3CA6NJZ7 1639 aa15.05■□□□□ -0
AC055860.1-201ENST00000525523 RIMBP3BA6NNM3 1639 aa15.05■□□□□ -0
AC055860.1-201ENST00000525523 RIMBP3Q9UFD9 1639 aa15.05■□□□□ -0
AC055860.1-201ENST00000525523 OSCARQ8IYS5 282 aa15.02■□□□□ -0
AC055860.1-201ENST00000525523 CADPSQ9ULU8 1353 aa14.97□□□□□ -0.01
AC055860.1-201ENST00000525523 CEP164Q9UPV0 1460 aa14.96□□□□□ -0.01
AC055860.1-201ENST00000525523 ARHGEF11O15085 1522 aa14.92□□□□□ -0.02
AC055860.1-201ENST00000525523 MROH2BQ7Z745 1585 aa14.85□□□□□ -0.03
AC055860.1-201ENST00000525523 FANCD2Q9BXW9 1451 aa14.84□□□□□ -0.03
AC055860.1-201ENST00000525523 URB2Q14146 1524 aaKnown RBP14.75□□□□□ -0.05
AC055860.1-201ENST00000525523 PRDM2Q13029 1718 aa14.73□□□□□ -0.05
AC055860.1-201ENST00000525523 TRHP20396 242 aaPredicted RBP14.73□□□□□ -0.05
AC055860.1-201ENST00000525523 CFTRP13569 1480 aa14.71□□□□□ -0.05
AC055860.1-201ENST00000525523 ARAP1Q96P48 1450 aa14.7□□□□□ -0.06
AC055860.1-201ENST00000525523 CHD1O14646 1710 aa14.69□□□□□ -0.06
AC055860.1-201ENST00000525523 WIZO95785 1651 aa14.68□□□□□ -0.06
AC055860.1-201ENST00000525523 CYB5RLQ6IPT4 315 aa14.67□□□□□ -0.06
AC055860.1-201ENST00000525523 IFT140Q96RY7 1462 aa14.67□□□□□ -0.06
AC055860.1-201ENST00000525523 EIF4G3O43432 1585 aaKnown RBP14.66□□□□□ -0.06
AC055860.1-201ENST00000525523 ZNF608Q9ULD9 1512 aaPredicted RBP14.64□□□□□ -0.07
AC055860.1-201ENST00000525523 RSF1Q96T23 1441 aaPredicted RBP14.64□□□□□ -0.07
AC055860.1-201ENST00000525523 MAPK8IP2Q13387 824 aaPredicted RBP14.57□□□□□ -0.08
AC055860.1-201ENST00000525523 TOP2AP11388 1531 aaKnown RBP14.5□□□□□ -0.09
AC055860.1-201ENST00000525523 TOPBP1Q92547 1522 aa14.5□□□□□ -0.09
AC055860.1-201ENST00000525523 ABCC8Q09428 1581 aa14.47□□□□□ -0.09
AC055860.1-201ENST00000525523 CLASP1Q7Z460 1538 aa14.46□□□□□ -0.09
AC055860.1-201ENST00000525523 TARBP1Q13395 1621 aaKnown RBP14.46□□□□□ -0.09
AC055860.1-201ENST00000525523 DNMBPQ6XZF7 1577 aa14.46□□□□□ -0.09
AC055860.1-201ENST00000525523 DMRT2Q9Y5R5 561 aa14.44□□□□□ -0.1
AC055860.1-201ENST00000525523 SCAF1Q9H7N4 1312 aaKnown RBP14.43□□□□□ -0.1
AC055860.1-201ENST00000525523 SYNJ1O43426 1573 aa14.42□□□□□ -0.1
AC055860.1-201ENST00000525523 AQRO60306 1485 aaKnown RBP eCLIP14.39□□□□□ -0.11
AC055860.1-201ENST00000525523 WDR97A6NE52 1622 aa14.38□□□□□ -0.11
AC055860.1-201ENST00000525523 FBLN2P98095 1184 aa14.37□□□□□ -0.11
AC055860.1-201ENST00000525523 SNAPC4Q5SXM2 1469 aa14.31□□□□□ -0.12
AC055860.1-201ENST00000525523 POLA1P09884 1462 aaPredicted RBP14.31□□□□□ -0.12
AC055860.1-201ENST00000525523 GAPVD1Q14C86 1478 aa14.29□□□□□ -0.12
AC055860.1-201ENST00000525523 MAGI1Q96QZ7 1491 aaPredicted RBP14.29□□□□□ -0.12
AC055860.1-201ENST00000525523 KIF13AQ9H1H9 1805 aa14.25□□□□□ -0.13
AC055860.1-201ENST00000525523 CCDC88BA6NC98 1476 aa14.23□□□□□ -0.13
AC055860.1-201ENST00000525523 SYNJ2O15056 1496 aa14.23□□□□□ -0.13
AC055860.1-201ENST00000525523 ILDR1Q86SU0 546 aaPredicted RBP14.22□□□□□ -0.13
AC055860.1-201ENST00000525523 PBRM1Q86U86 1689 aa14.21□□□□□ -0.13
AC055860.1-201ENST00000525523 RAD54L2Q9Y4B4 1467 aa14.2□□□□□ -0.14
AC055860.1-201ENST00000525523 PPP4R3CPQ6ZMV5 832 aa14.2□□□□□ -0.14
AC055860.1-201ENST00000525523 CHMP7Q8WUX9 453 aaPredicted RBP14.19□□□□□ -0.14
AC055860.1-201ENST00000525523 GRIN2BQ13224 1484 aa14.18□□□□□ -0.14
AC055860.1-201ENST00000525523 TDRD9Q8NDG6 1382 aaKnown RBP14.18□□□□□ -0.14
AC055860.1-201ENST00000525523 SOGA1O94964 1423 aa14.16□□□□□ -0.14
AC055860.1-201ENST00000525523 FGD5Q6ZNL6 1462 aa14.12□□□□□ -0.15
AC055860.1-201ENST00000525523 ERCC6L2Q5T890 1561 aa14.1□□□□□ -0.15
AC055860.1-201ENST00000525523 CEP170Q5SW79 1584 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms