RNA–Protein interactions for RNA: ENST00000525315.5

CTSB-209, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-209ENST00000525315 JPH4Q96JJ6 628 aa21.81■■□□□ 1.08
CTSB-209ENST00000525315 KIAA0586Q9BVV6 1533 aa21.8■■□□□ 1.08
CTSB-209ENST00000525315 RAPGEF2Q9Y4G8 1499 aa21.79■■□□□ 1.08
CTSB-209ENST00000525315 ERCC6L2Q5T890 1561 aa21.76■■□□□ 1.07
CTSB-209ENST00000525315 PRXQ9BXM0 1461 aa21.73■■□□□ 1.07
CTSB-209ENST00000525315 CSRNP3Q8WYN3 585 aa21.72■■□□□ 1.07
CTSB-209ENST00000525315 EEA1Q15075 1411 aa21.72■■□□□ 1.07
CTSB-209ENST00000525315 PRG4Q92954 1404 aaPredicted RBP21.72■■□□□ 1.07
CTSB-209ENST00000525315 IQGAP2Q13576 1575 aa21.64■■□□□ 1.05
CTSB-209ENST00000525315 CTTNBP2Q8WZ74 1663 aa21.6■■□□□ 1.05
CTSB-209ENST00000525315 FAM9AQ8IZU1 332 aaPredicted RBP21.59■■□□□ 1.05
CTSB-209ENST00000525315 UGGT2Q9NYU1 1516 aa21.55■■□□□ 1.04
CTSB-209ENST00000525315 CARMIL2Q6F5E8 1435 aa21.54■■□□□ 1.04
CTSB-209ENST00000525315 DISP1Q96F81 1524 aa21.51■■□□□ 1.03
CTSB-209ENST00000525315 KIF21BO75037 1637 aa21.49■■□□□ 1.03
CTSB-209ENST00000525315 TNIKQ9UKE5 1360 aa21.48■■□□□ 1.03
CTSB-209ENST00000525315 PTPRGP23470 1445 aa21.46■■□□□ 1.03
CTSB-209ENST00000525315 KIAA0556O60303 1618 aa21.44■■□□□ 1.02
CTSB-209ENST00000525315 GOLGA3Q08378 1498 aa21.41■■□□□ 1.02
CTSB-209ENST00000525315 ADCY10Q96PN6 1610 aa21.4■■□□□ 1.02
CTSB-209ENST00000525315 TTBK1Q5TCY1 1321 aaPredicted RBP21.37■■□□□ 1.01
CTSB-209ENST00000525315 TRHP20396 242 aaPredicted RBP21.35■■□□□ 1.01
CTSB-209ENST00000525315 NPM1P06748 294 aaKnown RBP eCLIP21.34■■□□□ 1.01
CTSB-209ENST00000525315 UHRF1BP1LA0JNW5 1464 aa21.32■■□□□ 1
CTSB-209ENST00000525315 UACAQ9BZF9 1416 aa21.32■■□□□ 1
CTSB-209ENST00000525315 SAMD9Q5K651 1589 aa21.31■■□□□ 1
CTSB-209ENST00000525315 UBTFP17480 764 aaKnown RBP21.3■■□□□ 1
CTSB-209ENST00000525315 P3H3Q8IVL6 736 aa21.27■■□□□ 1
CTSB-209ENST00000525315 EHMT2Q96KQ7 1210 aa21.27■■□□□ 1
CTSB-209ENST00000525315 MAPKBP1O60336 1514 aa21.27■■□□□ 1
CTSB-209ENST00000525315 ABCC2Q92887 1545 aa21.27■■□□□ 1
CTSB-209ENST00000525315 ABCA8O94911 1581 aa21.23■□□□□ 0.99
CTSB-209ENST00000525315 PLB1Q6P1J6 1458 aa21.22■□□□□ 0.99
CTSB-209ENST00000525315 RANGAP1P46060 587 aaPredicted RBP21.22■□□□□ 0.99
CTSB-209ENST00000525315 KDM5BQ9UGL1 1544 aa21.22■□□□□ 0.99
CTSB-209ENST00000525315 KIF13AQ9H1H9 1805 aa21.22■□□□□ 0.99
CTSB-209ENST00000525315 EFCAB5A4FU69 1503 aa21.19■□□□□ 0.98
CTSB-209ENST00000525315 ABCC10Q5T3U5 1492 aa21.17■□□□□ 0.98
CTSB-209ENST00000525315 ZCCHC11Q5TAX3 1644 aaKnown RBP21.17■□□□□ 0.98
CTSB-209ENST00000525315 FHOD3Q2V2M9 1422 aa21.15■□□□□ 0.98
CTSB-209ENST00000525315 ASXL2Q76L83 1435 aa21.13■□□□□ 0.97
CTSB-209ENST00000525315 FAM69CQ0P6D2 419 aa21.13■□□□□ 0.97
CTSB-209ENST00000525315 DIP2BQ9P265 1576 aa21.12■□□□□ 0.97
CTSB-209ENST00000525315 RAPGEF6Q8TEU7 1601 aa21.11■□□□□ 0.97
CTSB-209ENST00000525315 ARHGAP35Q9NRY4 1499 aa21.1■□□□□ 0.97
CTSB-209ENST00000525315 ATP10BO94823 1461 aa21.07■□□□□ 0.96
CTSB-209ENST00000525315 GLI2P10070 1586 aa21.05■□□□□ 0.96
CTSB-209ENST00000525315 EPRSP07814 1512 aaKnown RBP21.02■□□□□ 0.96
CTSB-209ENST00000525315 NUP153P49790 1475 aaKnown RBP21.01■□□□□ 0.95
CTSB-209ENST00000525315 WDR7Q9Y4E6 1490 aa21.01■□□□□ 0.95
CTSB-209ENST00000525315 FMN1Q68DA7 1419 aa21.01■□□□□ 0.95
CTSB-209ENST00000525315 TSPOAP1O95153 1857 aa20.99■□□□□ 0.95
CTSB-209ENST00000525315 ARID3CA6NKF2 412 aa20.99■□□□□ 0.95
CTSB-209ENST00000525315 CLIP1P30622 1438 aa20.95■□□□□ 0.95
CTSB-209ENST00000525315 LOC105371045A0A1W2PR82 267 aa20.95■□□□□ 0.94
CTSB-209ENST00000525315 MAP3K4Q9Y6R4 1608 aa20.94■□□□□ 0.94
CTSB-209ENST00000525315 KCNH8Q96L42 1107 aa20.94■□□□□ 0.94
CTSB-209ENST00000525315 PPRC1Q5VV67 1664 aaKnown RBP20.93■□□□□ 0.94
CTSB-209ENST00000525315 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.92■□□□□ 0.94
CTSB-209ENST00000525315 HNRNPUL2Q1KMD3 747 aaKnown RBP20.92■□□□□ 0.94
CTSB-209ENST00000525315 HECW1Q76N89 1606 aa20.89■□□□□ 0.94
CTSB-209ENST00000525315 CFAP43Q8NDM7 1665 aa20.89■□□□□ 0.93
CTSB-209ENST00000525315 PLEKHD1A6NEE1 506 aa20.88■□□□□ 0.93
CTSB-209ENST00000525315 ATP1B4Q9UN42 357 aaPredicted RBP20.87■□□□□ 0.93
CTSB-209ENST00000525315 LRRIQ1Q96JM4 1722 aa20.86■□□□□ 0.93
CTSB-209ENST00000525315 CASKIN1Q8WXD9 1431 aa20.86■□□□□ 0.93
CTSB-209ENST00000525315 CDK13Q14004 1512 aaKnown RBP20.85■□□□□ 0.93
CTSB-209ENST00000525315 CEP162Q5TB80 1403 aa20.85■□□□□ 0.93
CTSB-209ENST00000525315 CD109Q6YHK3 1445 aa20.84■□□□□ 0.93
CTSB-209ENST00000525315 ABCA9Q8IUA7 1624 aa20.83■□□□□ 0.93
CTSB-209ENST00000525315 MAGI3Q5TCQ9 1506 aa20.82■□□□□ 0.92
CTSB-209ENST00000525315 TEX14Q8IWB6 1497 aa20.81■□□□□ 0.92
CTSB-209ENST00000525315 PCF11O94913 1555 aaKnown RBP20.8■□□□□ 0.92
CTSB-209ENST00000525315 CDK11AQ9UQ88 783 aaPredicted RBP20.79■□□□□ 0.92
CTSB-209ENST00000525315 FYCO1Q9BQS8 1478 aa20.78■□□□□ 0.92
CTSB-209ENST00000525315 KDM6BO15054 1643 aa20.78■□□□□ 0.92
CTSB-209ENST00000525315 CCDC18Q5T9S5 1454 aa20.75■□□□□ 0.91
CTSB-209ENST00000525315 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.73■□□□□ 0.91
CTSB-209ENST00000525315 COL17A1Q9UMD9 1497 aaPredicted RBP20.71■□□□□ 0.91
CTSB-209ENST00000525315 TROQ12816 1431 aaPredicted RBP20.7■□□□□ 0.9
CTSB-209ENST00000525315 PHLDB1Q86UU1 1377 aa20.68■□□□□ 0.9
CTSB-209ENST00000525315 TTC37Q6PGP7 1564 aa20.68■□□□□ 0.9
CTSB-209ENST00000525315 KIF14Q15058 1648 aa20.65■□□□□ 0.9
CTSB-209ENST00000525315 ARAP3Q8WWN8 1544 aa20.65■□□□□ 0.9
CTSB-209ENST00000525315 NEO1Q92859 1461 aa20.64■□□□□ 0.89
CTSB-209ENST00000525315 PLCH2O75038 1416 aa20.62■□□□□ 0.89
CTSB-209ENST00000525315 VPS8Q8N3P4 1428 aa20.61■□□□□ 0.89
CTSB-209ENST00000525315 MYO5CQ9NQX4 1742 aa20.61■□□□□ 0.89
CTSB-209ENST00000525315 CFAP74Q9C0B2 1584 aa20.59■□□□□ 0.89
CTSB-209ENST00000525315 FANCAO15360 1455 aa20.58■□□□□ 0.89
CTSB-209ENST00000525315 AKNAQ7Z591 1439 aa20.58■□□□□ 0.88
CTSB-209ENST00000525315 CDC42BPBQ9Y5S2 1711 aa20.55■□□□□ 0.88
CTSB-209ENST00000525315 EFCAB2Q5VUJ9 269 aa20.54■□□□□ 0.88
CTSB-209ENST00000525315 MTUS2Q5JR59 1369 aa20.53■□□□□ 0.88
CTSB-209ENST00000525315 CDC42BPAQ5VT25 1732 aa20.53■□□□□ 0.88
CTSB-209ENST00000525315 RAPGEF3O95398 923 aa20.52■□□□□ 0.88
CTSB-209ENST00000525315 TIAM1Q13009 1591 aa20.5■□□□□ 0.87
CTSB-209ENST00000525315 RICTORQ6R327 1708 aa20.5■□□□□ 0.87
CTSB-209ENST00000525315 PREX2Q70Z35 1606 aa20.49■□□□□ 0.87
CTSB-209ENST00000525315 MAP3K1Q13233 1512 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 162.5 ms