RNA–Protein interactions for RNA: ENST00000525064.5

CLNS1A-202, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-202ENST00000525064 KIF27Q86VH2 1401 aa20.7■□□□□ 0.9
CLNS1A-202ENST00000525064 IGF1RP08069 1367 aa20.69■□□□□ 0.9
CLNS1A-202ENST00000525064 JPH4Q96JJ6 628 aa20.65■□□□□ 0.9
CLNS1A-202ENST00000525064 KIF13AQ9H1H9 1805 aa20.6■□□□□ 0.89
CLNS1A-202ENST00000525064 KIAA0586Q9BVV6 1533 aa20.59■□□□□ 0.89
CLNS1A-202ENST00000525064 CARMIL1Q5VZK9 1371 aa20.56■□□□□ 0.88
CLNS1A-202ENST00000525064 ADCY10Q96PN6 1610 aa20.55■□□□□ 0.88
CLNS1A-202ENST00000525064 IQGAP2Q13576 1575 aa20.46■□□□□ 0.87
CLNS1A-202ENST00000525064 CHIC1Q5VXU3 224 aa20.45■□□□□ 0.86
CLNS1A-202ENST00000525064 MAPKBP1O60336 1514 aa20.43■□□□□ 0.86
CLNS1A-202ENST00000525064 DIP2BQ9P265 1576 aa20.42■□□□□ 0.86
CLNS1A-202ENST00000525064 ABCC10Q5T3U5 1492 aa20.39■□□□□ 0.85
CLNS1A-202ENST00000525064 RAPGEF2Q9Y4G8 1499 aa20.39■□□□□ 0.85
CLNS1A-202ENST00000525064 DISP1Q96F81 1524 aa20.37■□□□□ 0.85
CLNS1A-202ENST00000525064 PTPRGP23470 1445 aa20.36■□□□□ 0.85
CLNS1A-202ENST00000525064 CTTNBP2Q8WZ74 1663 aa20.35■□□□□ 0.85
CLNS1A-202ENST00000525064 TTBK1Q5TCY1 1321 aaPredicted RBP20.35■□□□□ 0.85
CLNS1A-202ENST00000525064 TNIKQ9UKE5 1360 aa20.34■□□□□ 0.85
CLNS1A-202ENST00000525064 CARMIL2Q6F5E8 1435 aa20.34■□□□□ 0.85
CLNS1A-202ENST00000525064 TSPOAP1O95153 1857 aa20.33■□□□□ 0.85
CLNS1A-202ENST00000525064 NPM1P06748 294 aaKnown RBP eCLIP20.33■□□□□ 0.85
CLNS1A-202ENST00000525064 UGGT2Q9NYU1 1516 aa20.32■□□□□ 0.84
CLNS1A-202ENST00000525064 FAM69CQ0P6D2 419 aa20.32■□□□□ 0.84
CLNS1A-202ENST00000525064 KIAA0556O60303 1618 aa20.31■□□□□ 0.84
CLNS1A-202ENST00000525064 ABCC2Q92887 1545 aa20.28■□□□□ 0.84
CLNS1A-202ENST00000525064 UHRF1BP1LA0JNW5 1464 aa20.25■□□□□ 0.83
CLNS1A-202ENST00000525064 UACAQ9BZF9 1416 aa20.23■□□□□ 0.83
CLNS1A-202ENST00000525064 PRXQ9BXM0 1461 aa20.23■□□□□ 0.83
CLNS1A-202ENST00000525064 ZCCHC11Q5TAX3 1644 aaKnown RBP20.21■□□□□ 0.83
CLNS1A-202ENST00000525064 PPRC1Q5VV67 1664 aaKnown RBP20.21■□□□□ 0.83
CLNS1A-202ENST00000525064 ASXL2Q76L83 1435 aa20.2■□□□□ 0.82
CLNS1A-202ENST00000525064 KDM6BO15054 1643 aa20.19■□□□□ 0.82
CLNS1A-202ENST00000525064 KDM5BQ9UGL1 1544 aa20.17■□□□□ 0.82
CLNS1A-202ENST00000525064 GLI2P10070 1586 aa20.16■□□□□ 0.82
CLNS1A-202ENST00000525064 PLB1Q6P1J6 1458 aa20.15■□□□□ 0.82
CLNS1A-202ENST00000525064 GOLGA3Q08378 1498 aa20.11■□□□□ 0.81
CLNS1A-202ENST00000525064 MAP3K4Q9Y6R4 1608 aa20.1■□□□□ 0.81
CLNS1A-202ENST00000525064 ABCA8O94911 1581 aa20.1■□□□□ 0.81
CLNS1A-202ENST00000525064 EPRSP07814 1512 aaKnown RBP20.09■□□□□ 0.81
CLNS1A-202ENST00000525064 CSRNP3Q8WYN3 585 aa20.02■□□□□ 0.8
CLNS1A-202ENST00000525064 WDR7Q9Y4E6 1490 aa20.02■□□□□ 0.8
CLNS1A-202ENST00000525064 SAMD9Q5K651 1589 aa20.02■□□□□ 0.8
CLNS1A-202ENST00000525064 COL17A1Q9UMD9 1497 aaPredicted RBP19.98■□□□□ 0.79
CLNS1A-202ENST00000525064 P3H3Q8IVL6 736 aa19.97■□□□□ 0.79
CLNS1A-202ENST00000525064 EEA1Q15075 1411 aa19.96■□□□□ 0.79
CLNS1A-202ENST00000525064 CFAP43Q8NDM7 1665 aa19.95■□□□□ 0.78
CLNS1A-202ENST00000525064 TEX14Q8IWB6 1497 aa19.92■□□□□ 0.78
CLNS1A-202ENST00000525064 RAPGEF6Q8TEU7 1601 aa19.91■□□□□ 0.78
CLNS1A-202ENST00000525064 FAM9AQ8IZU1 332 aaPredicted RBP19.91■□□□□ 0.78
CLNS1A-202ENST00000525064 KIF21BO75037 1637 aa19.91■□□□□ 0.78
CLNS1A-202ENST00000525064 ARID3CA6NKF2 412 aa19.9■□□□□ 0.78
CLNS1A-202ENST00000525064 KDM4FA0A1W2PPD8 638 aa19.89■□□□□ 0.77
CLNS1A-202ENST00000525064 ATP10BO94823 1461 aa19.89■□□□□ 0.77
CLNS1A-202ENST00000525064 KCNH8Q96L42 1107 aa19.88■□□□□ 0.77
CLNS1A-202ENST00000525064 CD109Q6YHK3 1445 aa19.86■□□□□ 0.77
CLNS1A-202ENST00000525064 MAGI3Q5TCQ9 1506 aa19.86■□□□□ 0.77
CLNS1A-202ENST00000525064 FHOD3Q2V2M9 1422 aa19.85■□□□□ 0.77
CLNS1A-202ENST00000525064 RANGAP1P46060 587 aaPredicted RBP19.85■□□□□ 0.77
CLNS1A-202ENST00000525064 NUP153P49790 1475 aaKnown RBP19.81■□□□□ 0.76
CLNS1A-202ENST00000525064 ABCA9Q8IUA7 1624 aa19.81■□□□□ 0.76
CLNS1A-202ENST00000525064 ADGRL1O94910 1474 aa19.79■□□□□ 0.76
CLNS1A-202ENST00000525064 EFCAB5A4FU69 1503 aa19.77■□□□□ 0.76
CLNS1A-202ENST00000525064 EHMT2Q96KQ7 1210 aa19.75■□□□□ 0.75
CLNS1A-202ENST00000525064 ARAP3Q8WWN8 1544 aa19.7■□□□□ 0.74
CLNS1A-202ENST00000525064 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.69■□□□□ 0.74
CLNS1A-202ENST00000525064 HNRNPUL2Q1KMD3 747 aaKnown RBP19.69■□□□□ 0.74
CLNS1A-202ENST00000525064 CDK13Q14004 1512 aaKnown RBP19.67■□□□□ 0.74
CLNS1A-202ENST00000525064 FRMPD1Q5SYB0 1578 aa19.66■□□□□ 0.74
CLNS1A-202ENST00000525064 ARHGAP35Q9NRY4 1499 aa19.65■□□□□ 0.74
CLNS1A-202ENST00000525064 TTC37Q6PGP7 1564 aa19.65■□□□□ 0.74
CLNS1A-202ENST00000525064 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.63■□□□□ 0.738e-8■■□□□ 13.9
CLNS1A-202ENST00000525064 UBTFP17480 764 aaKnown RBP19.63■□□□□ 0.73
CLNS1A-202ENST00000525064 NEO1Q92859 1461 aa19.62■□□□□ 0.73
CLNS1A-202ENST00000525064 LRRIQ1Q96JM4 1722 aa19.61■□□□□ 0.73
CLNS1A-202ENST00000525064 HECW1Q76N89 1606 aa19.59■□□□□ 0.73
CLNS1A-202ENST00000525064 RICTORQ6R327 1708 aa19.59■□□□□ 0.73
CLNS1A-202ENST00000525064 PHLDB1Q86UU1 1377 aa19.58■□□□□ 0.73
CLNS1A-202ENST00000525064 RAPGEF3O95398 923 aa19.58■□□□□ 0.72
CLNS1A-202ENST00000525064 PLEKHD1A6NEE1 506 aa19.57■□□□□ 0.72
CLNS1A-202ENST00000525064 CFAP74Q9C0B2 1584 aa19.56■□□□□ 0.72
CLNS1A-202ENST00000525064 FMN1Q68DA7 1419 aa19.54■□□□□ 0.72
CLNS1A-202ENST00000525064 FANCAO15360 1455 aa19.53■□□□□ 0.72
CLNS1A-202ENST00000525064 HECW2Q9P2P5 1572 aa19.53■□□□□ 0.72
CLNS1A-202ENST00000525064 AKNAQ7Z591 1439 aa19.52■□□□□ 0.72
CLNS1A-202ENST00000525064 ADAMTSL3P82987 1691 aa19.52■□□□□ 0.71
CLNS1A-202ENST00000525064 ARHGEF40Q8TER5 1519 aa19.51■□□□□ 0.71
CLNS1A-202ENST00000525064 KIF14Q15058 1648 aa19.51■□□□□ 0.71
CLNS1A-202ENST00000525064 BCORL1Q5H9F3 1711 aa19.5■□□□□ 0.71
CLNS1A-202ENST00000525064 MYO5CQ9NQX4 1742 aa19.5■□□□□ 0.71
CLNS1A-202ENST00000525064 DENND4BO75064 1496 aaPredicted RBP19.49■□□□□ 0.71
CLNS1A-202ENST00000525064 ATP1B4Q9UN42 357 aaPredicted RBP19.49■□□□□ 0.71
CLNS1A-202ENST00000525064 PCF11O94913 1555 aaKnown RBP19.49■□□□□ 0.71
CLNS1A-202ENST00000525064 SIGLEC1Q9BZZ2 1709 aa19.48■□□□□ 0.71
CLNS1A-202ENST00000525064 ZMYM4Q5VZL5 1548 aa19.46■□□□□ 0.71
CLNS1A-202ENST00000525064 MADDQ8WXG6 1647 aa19.44■□□□□ 0.7
CLNS1A-202ENST00000525064 PLCH2O75038 1416 aa19.43■□□□□ 0.7
CLNS1A-202ENST00000525064 TROQ12816 1431 aaPredicted RBP19.42■□□□□ 0.7
CLNS1A-202ENST00000525064 YEATS2Q9ULM3 1422 aa19.41■□□□□ 0.7
CLNS1A-202ENST00000525064 ZFYVE16Q7Z3T8 1539 aa19.41■□□□□ 0.7
CLNS1A-202ENST00000525064 PTPRMP28827 1452 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms