RNA–Protein interactions for RNA: ENST00000525064.5

CLNS1A-202, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-202ENST00000525064 NISCHQ9Y2I1 1504 aa29.68■■■□□ 2.34
CLNS1A-202ENST00000525064 CCDC180Q9P1Z9 1646 aa26.62■■□□□ 1.85
CLNS1A-202ENST00000525064 ABCC9O60706 1549 aa26.48■■□□□ 1.83
CLNS1A-202ENST00000525064 RB1CC1Q8TDY2 1594 aa25.23■■□□□ 1.63
CLNS1A-202ENST00000525064 NACADO15069 1562 aa25.07■■□□□ 1.6
CLNS1A-202ENST00000525064 DCAF8L2P0C7V8 631 aa24.9■■□□□ 1.58
CLNS1A-202ENST00000525064 UNC13AQ9UPW8 1703 aa24.84■■□□□ 1.57
CLNS1A-202ENST00000525064 MYO15BQ96JP2 1530 aa24.75■■□□□ 1.55
CLNS1A-202ENST00000525064 DNAJC5BQ9UF47 199 aa24.72■■□□□ 1.55
CLNS1A-202ENST00000525064 ZCCHC6Q5VYS8 1495 aaKnown RBP24.64■■□□□ 1.54
CLNS1A-202ENST00000525064 PABPN1Q86U42 306 aaKnown RBP eCLIP24.63■■□□□ 1.53
CLNS1A-202ENST00000525064 BICRAQ9NZM4 1560 aa24.58■■□□□ 1.52
CLNS1A-202ENST00000525064 DCAF1Q9Y4B6 1507 aa24.5■■□□□ 1.51
CLNS1A-202ENST00000525064 SCRIBQ14160 1630 aa24.3■■□□□ 1.48
CLNS1A-202ENST00000525064 SHROOM4Q9ULL8 1493 aa24.13■■□□□ 1.45
CLNS1A-202ENST00000525064 CC2D2AQ9P2K1 1620 aa23.95■■□□□ 1.43
CLNS1A-202ENST00000525064 EIF4G1Q04637 1599 aaKnown RBP23.92■■□□□ 1.42
CLNS1A-202ENST00000525064 CECR2Q9BXF3 1484 aa23.81■■□□□ 1.4
CLNS1A-202ENST00000525064 SMARCA4P51532 1647 aa23.17■■□□□ 1.3
CLNS1A-202ENST00000525064 NCAPD3P42695 1498 aa23.12■■□□□ 1.29
CLNS1A-202ENST00000525064 ATAD2BQ9ULI0 1458 aa23.11■■□□□ 1.29
CLNS1A-202ENST00000525064 SMARCA2P51531 1590 aa23.04■■□□□ 1.28
CLNS1A-202ENST00000525064 BAZ1AQ9NRL2 1556 aaPredicted RBP23.01■■□□□ 1.27
CLNS1A-202ENST00000525064 HMGXB3Q12766 1538 aa23.01■■□□□ 1.27
CLNS1A-202ENST00000525064 MROH2BQ7Z745 1585 aa22.91■■□□□ 1.26
CLNS1A-202ENST00000525064 PEG3Q9GZU2 1588 aa22.91■■□□□ 1.26
CLNS1A-202ENST00000525064 BAZ1BQ9UIG0 1483 aaKnown RBP22.88■■□□□ 1.25
CLNS1A-202ENST00000525064 NESP48681 1621 aa22.82■■□□□ 1.24
CLNS1A-202ENST00000525064 ERCC6Q03468 1493 aa22.8■■□□□ 1.24
CLNS1A-202ENST00000525064 CUX2O14529 1486 aa22.72■■□□□ 1.23
CLNS1A-202ENST00000525064 WIZO95785 1651 aa22.68■■□□□ 1.22
CLNS1A-202ENST00000525064 LAMC3Q9Y6N6 1575 aa22.63■■□□□ 1.21
CLNS1A-202ENST00000525064 THOC2Q8NI27 1593 aaKnown RBP22.59■■□□□ 1.21
CLNS1A-202ENST00000525064 KIF21AQ7Z4S6 1674 aa22.59■■□□□ 1.21
CLNS1A-202ENST00000525064 DNAJC5Q9H3Z4 198 aa22.52■■□□□ 1.2
CLNS1A-202ENST00000525064 RSF1Q96T23 1441 aaPredicted RBP22.43■■□□□ 1.18
CLNS1A-202ENST00000525064 PDS5BQ9NTI5 1447 aa22.41■■□□□ 1.18
CLNS1A-202ENST00000525064 CADPSQ9ULU8 1353 aa22.41■■□□□ 1.18
CLNS1A-202ENST00000525064 TOP2AP11388 1531 aaKnown RBP22.35■■□□□ 1.17
CLNS1A-202ENST00000525064 MRC2Q9UBG0 1479 aa22.28■■□□□ 1.16
CLNS1A-202ENST00000525064 WDR62O43379 1518 aa22.25■■□□□ 1.15
CLNS1A-202ENST00000525064 CFTRP13569 1480 aa22.22■■□□□ 1.15
CLNS1A-202ENST00000525064 CEP164Q9UPV0 1460 aa22.22■■□□□ 1.15
CLNS1A-202ENST00000525064 FANCD2Q9BXW9 1451 aa22.21■■□□□ 1.15
CLNS1A-202ENST00000525064 PRDM2Q13029 1718 aa22.15■■□□□ 1.14
CLNS1A-202ENST00000525064 CCDC88BA6NC98 1476 aa22.07■■□□□ 1.12
CLNS1A-202ENST00000525064 URB2Q14146 1524 aaKnown RBP22.06■■□□□ 1.12
CLNS1A-202ENST00000525064 AEBP2Q6ZN18 517 aaPredicted RBP21.96■■□□□ 1.11
CLNS1A-202ENST00000525064 TOPBP1Q92547 1522 aa21.82■■□□□ 1.08
CLNS1A-202ENST00000525064 ZNF608Q9ULD9 1512 aaPredicted RBP21.77■■□□□ 1.08
CLNS1A-202ENST00000525064 DNMBPQ6XZF7 1577 aa21.76■■□□□ 1.07
CLNS1A-202ENST00000525064 IFT140Q96RY7 1462 aa21.75■■□□□ 1.07
CLNS1A-202ENST00000525064 ABCC8Q09428 1581 aa21.7■■□□□ 1.06
CLNS1A-202ENST00000525064 EIF4G3O43432 1585 aaKnown RBP21.69■■□□□ 1.06
CLNS1A-202ENST00000525064 TARBP1Q13395 1621 aaKnown RBP21.66■■□□□ 1.06
CLNS1A-202ENST00000525064 OSCARQ8IYS5 282 aa21.63■■□□□ 1.05
CLNS1A-202ENST00000525064 TRIM41Q8WV44 630 aa21.62■■□□□ 1.05
CLNS1A-202ENST00000525064 POLA1P09884 1462 aaPredicted RBP21.6■■□□□ 1.05
CLNS1A-202ENST00000525064 CHD1O14646 1710 aa21.55■■□□□ 1.04
CLNS1A-202ENST00000525064 AQRO60306 1485 aaKnown RBP eCLIP21.54■■□□□ 1.047e-8■■■■□ 26.4
CLNS1A-202ENST00000525064 RAD54L2Q9Y4B4 1467 aa21.53■■□□□ 1.04
CLNS1A-202ENST00000525064 CUX1P39880 1505 aa21.52■■□□□ 1.04
CLNS1A-202ENST00000525064 RIMBP3CA6NJZ7 1639 aa21.51■■□□□ 1.03
CLNS1A-202ENST00000525064 RIMBP3BA6NNM3 1639 aa21.51■■□□□ 1.03
CLNS1A-202ENST00000525064 RIMBP3Q9UFD9 1639 aa21.51■■□□□ 1.03
CLNS1A-202ENST00000525064 SUPT5HO00267 1087 aaKnown RBP21.49■■□□□ 1.03
CLNS1A-202ENST00000525064 FGD5Q6ZNL6 1462 aa21.49■■□□□ 1.03
CLNS1A-202ENST00000525064 SOGA1O94964 1423 aa21.45■■□□□ 1.02
CLNS1A-202ENST00000525064 WDR97A6NE52 1622 aa21.43■■□□□ 1.02
CLNS1A-202ENST00000525064 TDRD9Q8NDG6 1382 aaKnown RBP21.41■■□□□ 1.02
CLNS1A-202ENST00000525064 ARHGEF11O15085 1522 aa21.4■■□□□ 1.02
CLNS1A-202ENST00000525064 SNAPC4Q5SXM2 1469 aa21.36■■□□□ 1.01
CLNS1A-202ENST00000525064 PBRM1Q86U86 1689 aa21.33■■□□□ 1
CLNS1A-202ENST00000525064 FBLN2P98095 1184 aa21.31■■□□□ 1
CLNS1A-202ENST00000525064 GRIN2BQ13224 1484 aa21.26■□□□□ 0.99
CLNS1A-202ENST00000525064 MAGI1Q96QZ7 1491 aaPredicted RBP21.26■□□□□ 0.99
CLNS1A-202ENST00000525064 ABCA5Q8WWZ7 1642 aa21.26■□□□□ 0.99
CLNS1A-202ENST00000525064 CLASP1Q7Z460 1538 aa21.24■□□□□ 0.99
CLNS1A-202ENST00000525064 ABCA10Q8WWZ4 1543 aa21.24■□□□□ 0.99
CLNS1A-202ENST00000525064 BIVM-ERCC5R4GMW8 1640 aa21.23■□□□□ 0.99
CLNS1A-202ENST00000525064 GAPVD1Q14C86 1478 aa21.22■□□□□ 0.99
CLNS1A-202ENST00000525064 ARAP1Q96P48 1450 aa21.22■□□□□ 0.99
CLNS1A-202ENST00000525064 SYNJ1O43426 1573 aa21.21■□□□□ 0.99
CLNS1A-202ENST00000525064 TOP2BQ02880 1626 aa21.19■□□□□ 0.98
CLNS1A-202ENST00000525064 SYNJ2O15056 1496 aa21.19■□□□□ 0.98
CLNS1A-202ENST00000525064 CYB5RLQ6IPT4 315 aa21.15■□□□□ 0.98
CLNS1A-202ENST00000525064 CHMP7Q8WUX9 453 aaPredicted RBP21.15■□□□□ 0.98
CLNS1A-202ENST00000525064 WRNQ14191 1432 aaPredicted RBP eCLIP21.13■□□□□ 0.97
CLNS1A-202ENST00000525064 ADAMTS12P58397 1594 aa21.09■□□□□ 0.97
CLNS1A-202ENST00000525064 GRIN2AQ12879 1464 aa21.01■□□□□ 0.95
CLNS1A-202ENST00000525064 CEP170Q5SW79 1584 aa21■□□□□ 0.95
CLNS1A-202ENST00000525064 ERICH3Q5RHP9 1530 aa20.96■□□□□ 0.95
CLNS1A-202ENST00000525064 ERCC6L2Q5T890 1561 aa20.96■□□□□ 0.95
CLNS1A-202ENST00000525064 FHAD1B1AJZ9 1412 aa20.94■□□□□ 0.94
CLNS1A-202ENST00000525064 NUP160Q12769 1436 aa20.94■□□□□ 0.94
CLNS1A-202ENST00000525064 SHROOM2Q13796 1616 aa20.89■□□□□ 0.93
CLNS1A-202ENST00000525064 TRHP20396 242 aaPredicted RBP20.85■□□□□ 0.93
CLNS1A-202ENST00000525064 RUSC2Q8N2Y8 1516 aa20.79■□□□□ 0.92
CLNS1A-202ENST00000525064 CUL7Q14999 1698 aa20.72■□□□□ 0.91
CLNS1A-202ENST00000525064 PRG4Q92954 1404 aaPredicted RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms