RNA–Protein interactions for RNA: ENST00000524817.5

SWAP70-203, Transcript of switching B cell complex subunit SWAP70, humanhuman

TSL 1 (best)

Gene SWAP70, Length 3,006 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWAP70-203ENST00000524817 CEP170Q5SW79 1584 aa21.37■■□□□ 1.01
SWAP70-203ENST00000524817 JPH4Q96JJ6 628 aa21.31■■□□□ 1
SWAP70-203ENST00000524817 NUP160Q12769 1436 aa21.27■■□□□ 1
SWAP70-203ENST00000524817 GOLGA3Q08378 1498 aa21.26■□□□□ 0.99
SWAP70-203ENST00000524817 DNAJC5Q9H3Z4 198 aa21.24■□□□□ 0.99
SWAP70-203ENST00000524817 KIF21BO75037 1637 aa21.22■□□□□ 0.99
SWAP70-203ENST00000524817 ERCC6L2Q5T890 1561 aa21.22■□□□□ 0.99
SWAP70-203ENST00000524817 CYB5RLQ6IPT4 315 aa21.19■□□□□ 0.98
SWAP70-203ENST00000524817 KIAA0586Q9BVV6 1533 aa21.19■□□□□ 0.98
SWAP70-203ENST00000524817 PRG4Q92954 1404 aaPredicted RBP21.18■□□□□ 0.98
SWAP70-203ENST00000524817 CLASP1Q7Z460 1538 aa21.18■□□□□ 0.98
SWAP70-203ENST00000524817 ARID3CA6NKF2 412 aa21.15■□□□□ 0.98
SWAP70-203ENST00000524817 IQGAP2Q13576 1575 aa21.15■□□□□ 0.98
SWAP70-203ENST00000524817 CTTNBP2Q8WZ74 1663 aa21.11■□□□□ 0.97
SWAP70-203ENST00000524817 ARHGEF11O15085 1522 aa21.09■□□□□ 0.97
SWAP70-203ENST00000524817 ATP1B4Q9UN42 357 aaPredicted RBP21.09■□□□□ 0.97
SWAP70-203ENST00000524817 FHOD3Q2V2M9 1422 aa21.05■□□□□ 0.96
SWAP70-203ENST00000524817 TNIKQ9UKE5 1360 aa21.05■□□□□ 0.96
SWAP70-203ENST00000524817 RIMBP3CA6NJZ7 1639 aa21.04■□□□□ 0.96
SWAP70-203ENST00000524817 RIMBP3BA6NNM3 1639 aa21.04■□□□□ 0.96
SWAP70-203ENST00000524817 RIMBP3Q9UFD9 1639 aa21.04■□□□□ 0.96
SWAP70-203ENST00000524817 DISP1Q96F81 1524 aa21.03■□□□□ 0.96
SWAP70-203ENST00000524817 CEP162Q5TB80 1403 aa21■□□□□ 0.95
SWAP70-203ENST00000524817 CLIP1P30622 1438 aa21■□□□□ 0.95
SWAP70-203ENST00000524817 CARMIL2Q6F5E8 1435 aa20.98■□□□□ 0.95
SWAP70-203ENST00000524817 SHROOM2Q13796 1616 aa20.98■□□□□ 0.95
SWAP70-203ENST00000524817 ARAP1Q96P48 1450 aa20.97■□□□□ 0.95
SWAP70-203ENST00000524817 ARHGAP35Q9NRY4 1499 aa20.96■□□□□ 0.95
SWAP70-203ENST00000524817 PTPRGP23470 1445 aa20.96■□□□□ 0.95
SWAP70-203ENST00000524817 UGGT2Q9NYU1 1516 aa20.96■□□□□ 0.95
SWAP70-203ENST00000524817 KIAA0556O60303 1618 aa20.93■□□□□ 0.94
SWAP70-203ENST00000524817 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.9■□□□□ 0.94
SWAP70-203ENST00000524817 HNRNPUL2Q1KMD3 747 aaKnown RBP20.9■□□□□ 0.94
SWAP70-203ENST00000524817 PLB1Q6P1J6 1458 aa20.9■□□□□ 0.94
SWAP70-203ENST00000524817 PPARGC1BQ86YN6 1023 aaKnown RBP20.85■□□□□ 0.93
SWAP70-203ENST00000524817 SAMD9Q5K651 1589 aa20.84■□□□□ 0.93
SWAP70-203ENST00000524817 EFCAB5A4FU69 1503 aa20.77■□□□□ 0.92
SWAP70-203ENST00000524817 UACAQ9BZF9 1416 aa20.76■□□□□ 0.91
SWAP70-203ENST00000524817 NPM1P06748 294 aaKnown RBP eCLIP20.75■□□□□ 0.91
SWAP70-203ENST00000524817 KCNH8Q96L42 1107 aa20.73■□□□□ 0.91
SWAP70-203ENST00000524817 ADCY10Q96PN6 1610 aa20.71■□□□□ 0.91
SWAP70-203ENST00000524817 FMN1Q68DA7 1419 aa20.69■□□□□ 0.9
SWAP70-203ENST00000524817 TRHP20396 242 aaPredicted RBP20.68■□□□□ 0.9
SWAP70-203ENST00000524817 CDK13Q14004 1512 aaKnown RBP20.68■□□□□ 0.9
SWAP70-203ENST00000524817 PCF11O94913 1555 aaKnown RBP20.67■□□□□ 0.9
SWAP70-203ENST00000524817 NUP153P49790 1475 aaKnown RBP20.66■□□□□ 0.9
SWAP70-203ENST00000524817 RAPGEF6Q8TEU7 1601 aa20.65■□□□□ 0.9
SWAP70-203ENST00000524817 ABCA8O94911 1581 aa20.65■□□□□ 0.9
SWAP70-203ENST00000524817 ABCC2Q92887 1545 aa20.64■□□□□ 0.89
SWAP70-203ENST00000524817 VPS8Q8N3P4 1428 aa20.63■□□□□ 0.89
SWAP70-203ENST00000524817 ATP10BO94823 1461 aa20.62■□□□□ 0.89
SWAP70-203ENST00000524817 KANK4Q5T7N3 995 aaPredicted RBP20.59■□□□□ 0.89
SWAP70-203ENST00000524817 APLP2Q06481 763 aa20.59■□□□□ 0.89
SWAP70-203ENST00000524817 CASKIN1Q8WXD9 1431 aa20.58■□□□□ 0.88
SWAP70-203ENST00000524817 LRRIQ1Q96JM4 1722 aa20.57■□□□□ 0.88
SWAP70-203ENST00000524817 EPRSP07814 1512 aaKnown RBP20.56■□□□□ 0.88
SWAP70-203ENST00000524817 ZCCHC11Q5TAX3 1644 aaKnown RBP20.56■□□□□ 0.88
SWAP70-203ENST00000524817 PLEKHD1A6NEE1 506 aa20.56■□□□□ 0.88
SWAP70-203ENST00000524817 ASXL2Q76L83 1435 aa20.55■□□□□ 0.88
SWAP70-203ENST00000524817 FAM69CQ0P6D2 419 aa20.54■□□□□ 0.88
SWAP70-203ENST00000524817 KDM5BQ9UGL1 1544 aa20.53■□□□□ 0.88
SWAP70-203ENST00000524817 UHRF1BP1LA0JNW5 1464 aa20.53■□□□□ 0.88
SWAP70-203ENST00000524817 HECW1Q76N89 1606 aa20.51■□□□□ 0.87
SWAP70-203ENST00000524817 FYCO1Q9BQS8 1478 aa20.51■□□□□ 0.87
SWAP70-203ENST00000524817 MTUS2Q5JR59 1369 aa20.47■□□□□ 0.87
SWAP70-203ENST00000524817 MAGI3Q5TCQ9 1506 aa20.46■□□□□ 0.87
SWAP70-203ENST00000524817 CDK11AQ9UQ88 783 aaPredicted RBP20.46■□□□□ 0.87
SWAP70-203ENST00000524817 WDR7Q9Y4E6 1490 aa20.41■□□□□ 0.86
SWAP70-203ENST00000524817 ZNF777Q9ULD5 760 aaPredicted RBP20.39■□□□□ 0.85
SWAP70-203ENST00000524817 TSPOAP1O95153 1857 aa20.38■□□□□ 0.85
SWAP70-203ENST00000524817 CCDC18Q5T9S5 1454 aa20.38■□□□□ 0.85
SWAP70-203ENST00000524817 TIAM1Q13009 1591 aa20.38■□□□□ 0.85
SWAP70-203ENST00000524817 KIF14Q15058 1648 aa20.37■□□□□ 0.85
SWAP70-203ENST00000524817 MAPKBP1O60336 1514 aa20.35■□□□□ 0.85
SWAP70-203ENST00000524817 TROQ12816 1431 aaPredicted RBP20.35■□□□□ 0.85
SWAP70-203ENST00000524817 LRRC9Q6ZRR7 1453 aa20.33■□□□□ 0.85
SWAP70-203ENST00000524817 ABCC10Q5T3U5 1492 aa20.33■□□□□ 0.84
SWAP70-203ENST00000524817 DIP2BQ9P265 1576 aa20.29■□□□□ 0.84
SWAP70-203ENST00000524817 ZNF644Q9H582 1327 aaPredicted RBP20.29■□□□□ 0.84
SWAP70-203ENST00000524817 CD109Q6YHK3 1445 aa20.29■□□□□ 0.84
SWAP70-203ENST00000524817 KIF13AQ9H1H9 1805 aa20.28■□□□□ 0.84
SWAP70-203ENST00000524817 TTC37Q6PGP7 1564 aa20.28■□□□□ 0.84
SWAP70-203ENST00000524817 CFAP43Q8NDM7 1665 aa20.28■□□□□ 0.84
SWAP70-203ENST00000524817 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.28■□□□□ 0.84
SWAP70-203ENST00000524817 NCOA2Q15596 1464 aa20.25■□□□□ 0.83
SWAP70-203ENST00000524817 CCNB3Q8WWL7 1395 aa20.24■□□□□ 0.83
SWAP70-203ENST00000524817 CFDP1Q9UEE9 299 aaPredicted RBP20.24■□□□□ 0.83
SWAP70-203ENST00000524817 PHLDB1Q86UU1 1377 aa20.24■□□□□ 0.83
SWAP70-203ENST00000524817 ITGAEP38570 1179 aa20.24■□□□□ 0.83
SWAP70-203ENST00000524817 EHBP1L1Q8N3D4 1523 aa20.21■□□□□ 0.83
SWAP70-203ENST00000524817 FAM50AQ14320 339 aaKnown RBP20.2■□□□□ 0.82
SWAP70-203ENST00000524817 RAPGEF3O95398 923 aa20.19■□□□□ 0.82
SWAP70-203ENST00000524817 HNRNPMP52272 730 aaKnown RBP eCLIP20.19■□□□□ 0.82
SWAP70-203ENST00000524817 ARHGAP5Q13017 1502 aa20.16■□□□□ 0.82
SWAP70-203ENST00000524817 GPATCH8Q9UKJ3 1502 aaKnown RBP20.16■□□□□ 0.82
SWAP70-203ENST00000524817 SUPT6HQ7KZ85 1726 aaKnown RBP20.16■□□□□ 0.82
SWAP70-203ENST00000524817 MAP3K1Q13233 1512 aa20.16■□□□□ 0.82
SWAP70-203ENST00000524817 MYT1LQ9UL68 1186 aa20.15■□□□□ 0.82
SWAP70-203ENST00000524817 ABCA9Q8IUA7 1624 aa20.14■□□□□ 0.82
SWAP70-203ENST00000524817 EFCAB2Q5VUJ9 269 aa20.14■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms