RNA–Protein interactions for RNA: ENST00000524817.5

SWAP70-203, Transcript of switching B cell complex subunit SWAP70, humanhuman

TSL 1 (best)

Gene SWAP70, Length 3,006 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWAP70-203ENST00000524817 NISCHQ9Y2I1 1504 aa30.75■■■□□ 2.51
SWAP70-203ENST00000524817 CCDC180Q9P1Z9 1646 aa26.89■■□□□ 1.9
SWAP70-203ENST00000524817 ABCC9O60706 1549 aa26.54■■□□□ 1.84
SWAP70-203ENST00000524817 DCAF8L2P0C7V8 631 aa26.22■■□□□ 1.79
SWAP70-203ENST00000524817 ZCCHC6Q5VYS8 1495 aaKnown RBP25.64■■□□□ 1.69
SWAP70-203ENST00000524817 RB1CC1Q8TDY2 1594 aa25.3■■□□□ 1.64
SWAP70-203ENST00000524817 NACADO15069 1562 aa25.29■■□□□ 1.64
SWAP70-203ENST00000524817 DCAF1Q9Y4B6 1507 aa25.16■■□□□ 1.62
SWAP70-203ENST00000524817 SHROOM4Q9ULL8 1493 aa25.13■■□□□ 1.61
SWAP70-203ENST00000524817 MYO15BQ96JP2 1530 aa25.06■■□□□ 1.6
SWAP70-203ENST00000524817 PABPN1Q86U42 306 aaKnown RBP eCLIP25.05■■□□□ 1.6
SWAP70-203ENST00000524817 SCRIBQ14160 1630 aa25.02■■□□□ 1.6
SWAP70-203ENST00000524817 UNC13AQ9UPW8 1703 aa24.84■■□□□ 1.57
SWAP70-203ENST00000524817 BICRAQ9NZM4 1560 aa24.62■■□□□ 1.53
SWAP70-203ENST00000524817 DNAJC5BQ9UF47 199 aa24.16■■□□□ 1.46
SWAP70-203ENST00000524817 CECR2Q9BXF3 1484 aa24.16■■□□□ 1.46
SWAP70-203ENST00000524817 EIF4G1Q04637 1599 aaKnown RBP23.96■■□□□ 1.43
SWAP70-203ENST00000524817 MROH2BQ7Z745 1585 aa23.86■■□□□ 1.41
SWAP70-203ENST00000524817 SUPT5HO00267 1087 aaKnown RBP23.84■■□□□ 1.41
SWAP70-203ENST00000524817 CC2D2AQ9P2K1 1620 aa23.82■■□□□ 1.4
SWAP70-203ENST00000524817 SMARCA4P51532 1647 aa23.77■■□□□ 1.4
SWAP70-203ENST00000524817 BAZ1AQ9NRL2 1556 aaPredicted RBP23.74■■□□□ 1.39
SWAP70-203ENST00000524817 RSF1Q96T23 1441 aaPredicted RBP23.69■■□□□ 1.38
SWAP70-203ENST00000524817 WIZO95785 1651 aa23.64■■□□□ 1.37
SWAP70-203ENST00000524817 ATAD2BQ9ULI0 1458 aa23.6■■□□□ 1.37
SWAP70-203ENST00000524817 BAZ1BQ9UIG0 1483 aaKnown RBP23.45■■□□□ 1.34
SWAP70-203ENST00000524817 SMARCA2P51531 1590 aa23.44■■□□□ 1.34
SWAP70-203ENST00000524817 NCAPD3P42695 1498 aa23.42■■□□□ 1.34
SWAP70-203ENST00000524817 PEG3Q9GZU2 1588 aa23.33■■□□□ 1.32
SWAP70-203ENST00000524817 HMGXB3Q12766 1538 aa23.24■■□□□ 1.31
SWAP70-203ENST00000524817 TOP2AP11388 1531 aaKnown RBP23.19■■□□□ 1.3
SWAP70-203ENST00000524817 CCDC88BA6NC98 1476 aa23.1■■□□□ 1.29
SWAP70-203ENST00000524817 NESP48681 1621 aa23.09■■□□□ 1.29
SWAP70-203ENST00000524817 CADPSQ9ULU8 1353 aa22.88■■□□□ 1.25
SWAP70-203ENST00000524817 ERCC6Q03468 1493 aa22.75■■□□□ 1.23
SWAP70-203ENST00000524817 CFTRP13569 1480 aa22.75■■□□□ 1.23
SWAP70-203ENST00000524817 LAMC3Q9Y6N6 1575 aa22.69■■□□□ 1.22
SWAP70-203ENST00000524817 FANCD2Q9BXW9 1451 aa22.65■■□□□ 1.22
SWAP70-203ENST00000524817 PDS5BQ9NTI5 1447 aa22.64■■□□□ 1.21
SWAP70-203ENST00000524817 KIF21AQ7Z4S6 1674 aa22.63■■□□□ 1.21
SWAP70-203ENST00000524817 CEP164Q9UPV0 1460 aa22.54■■□□□ 1.2
SWAP70-203ENST00000524817 ABCC8Q09428 1581 aa22.52■■□□□ 1.2
SWAP70-203ENST00000524817 PRDM2Q13029 1718 aa22.41■■□□□ 1.18
SWAP70-203ENST00000524817 URB2Q14146 1524 aaKnown RBP22.41■■□□□ 1.18
SWAP70-203ENST00000524817 MRC2Q9UBG0 1479 aa22.37■■□□□ 1.17
SWAP70-203ENST00000524817 THOC2Q8NI27 1593 aaKnown RBP22.34■■□□□ 1.17
SWAP70-203ENST00000524817 WRNQ14191 1432 aaPredicted RBP eCLIP22.32■■□□□ 1.16
SWAP70-203ENST00000524817 CUX1P39880 1505 aa22.31■■□□□ 1.16
SWAP70-203ENST00000524817 TOPBP1Q92547 1522 aa22.3■■□□□ 1.16
SWAP70-203ENST00000524817 TRIM41Q8WV44 630 aa22.28■■□□□ 1.16
SWAP70-203ENST00000524817 SYNJ1O43426 1573 aa22.26■■□□□ 1.15
SWAP70-203ENST00000524817 CHIC1Q5VXU3 224 aa22.25■■□□□ 1.15
SWAP70-203ENST00000524817 RAD54L2Q9Y4B4 1467 aa22.23■■□□□ 1.15
SWAP70-203ENST00000524817 WDR62O43379 1518 aa22.22■■□□□ 1.15
SWAP70-203ENST00000524817 FGD5Q6ZNL6 1462 aa22.2■■□□□ 1.14
SWAP70-203ENST00000524817 DNMBPQ6XZF7 1577 aa22.2■■□□□ 1.14
SWAP70-203ENST00000524817 POLA1P09884 1462 aaPredicted RBP22.17■■□□□ 1.14
SWAP70-203ENST00000524817 CUX2O14529 1486 aa22.15■■□□□ 1.14
SWAP70-203ENST00000524817 SOGA1O94964 1423 aa22.13■■□□□ 1.13
SWAP70-203ENST00000524817 FAM9AQ8IZU1 332 aaPredicted RBP22.13■■□□□ 1.13
SWAP70-203ENST00000524817 TDRD9Q8NDG6 1382 aaKnown RBP22.13■■□□□ 1.13
SWAP70-203ENST00000524817 ZNF608Q9ULD9 1512 aaPredicted RBP22.1■■□□□ 1.13
SWAP70-203ENST00000524817 TOP2BQ02880 1626 aa22.09■■□□□ 1.13
SWAP70-203ENST00000524817 EHMT2Q96KQ7 1210 aa22.07■■□□□ 1.12
SWAP70-203ENST00000524817 AQRO60306 1485 aaKnown RBP eCLIP22.06■■□□□ 1.12
SWAP70-203ENST00000524817 BIVM-ERCC5R4GMW8 1640 aa22.02■■□□□ 1.12
SWAP70-203ENST00000524817 RUSC2Q8N2Y8 1516 aa21.97■■□□□ 1.11
SWAP70-203ENST00000524817 IFT140Q96RY7 1462 aa21.97■■□□□ 1.11
SWAP70-203ENST00000524817 TARBP1Q13395 1621 aaKnown RBP21.95■■□□□ 1.1
SWAP70-203ENST00000524817 FBLN2P98095 1184 aa21.95■■□□□ 1.1
SWAP70-203ENST00000524817 ABCA10Q8WWZ4 1543 aa21.85■■□□□ 1.09
SWAP70-203ENST00000524817 EIF4G3O43432 1585 aaKnown RBP21.85■■□□□ 1.09
SWAP70-203ENST00000524817 GAPVD1Q14C86 1478 aa21.83■■□□□ 1.09
SWAP70-203ENST00000524817 KIF27Q86VH2 1401 aa21.77■■□□□ 1.08
SWAP70-203ENST00000524817 WDR97A6NE52 1622 aa21.77■■□□□ 1.08
SWAP70-203ENST00000524817 SNAPC4Q5SXM2 1469 aa21.74■■□□□ 1.07
SWAP70-203ENST00000524817 CHMP7Q8WUX9 453 aaPredicted RBP21.73■■□□□ 1.07
SWAP70-203ENST00000524817 IGF1RP08069 1367 aa21.71■■□□□ 1.07
SWAP70-203ENST00000524817 ABCA5Q8WWZ7 1642 aa21.71■■□□□ 1.07
SWAP70-203ENST00000524817 GRIN2BQ13224 1484 aa21.7■■□□□ 1.06
SWAP70-203ENST00000524817 CSRNP3Q8WYN3 585 aa21.68■■□□□ 1.06
SWAP70-203ENST00000524817 RANGAP1P46060 587 aaPredicted RBP21.67■■□□□ 1.06
SWAP70-203ENST00000524817 PBRM1Q86U86 1689 aa21.66■■□□□ 1.06
SWAP70-203ENST00000524817 CARMIL1Q5VZK9 1371 aa21.61■■□□□ 1.05
SWAP70-203ENST00000524817 LOC105371045A0A1W2PR82 267 aa21.61■■□□□ 1.05
SWAP70-203ENST00000524817 ERICH3Q5RHP9 1530 aa21.54■■□□□ 1.04
SWAP70-203ENST00000524817 CHD1O14646 1710 aa21.53■■□□□ 1.04
SWAP70-203ENST00000524817 OSCARQ8IYS5 282 aa21.53■■□□□ 1.04
SWAP70-203ENST00000524817 MAGI1Q96QZ7 1491 aaPredicted RBP21.53■■□□□ 1.04
SWAP70-203ENST00000524817 FHAD1B1AJZ9 1412 aa21.51■■□□□ 1.03
SWAP70-203ENST00000524817 UBTFP17480 764 aaKnown RBP21.51■■□□□ 1.03
SWAP70-203ENST00000524817 SYNJ2O15056 1496 aa21.51■■□□□ 1.03
SWAP70-203ENST00000524817 ADAMTS12P58397 1594 aa21.5■■□□□ 1.03
SWAP70-203ENST00000524817 TTBK1Q5TCY1 1321 aaPredicted RBP21.5■■□□□ 1.03
SWAP70-203ENST00000524817 RAPGEF2Q9Y4G8 1499 aa21.49■■□□□ 1.03
SWAP70-203ENST00000524817 GRIN2AQ12879 1464 aa21.46■■□□□ 1.03
SWAP70-203ENST00000524817 EEA1Q15075 1411 aa21.42■■□□□ 1.02
SWAP70-203ENST00000524817 PRXQ9BXM0 1461 aa21.41■■□□□ 1.02
SWAP70-203ENST00000524817 CUL7Q14999 1698 aa21.39■■□□□ 1.01
SWAP70-203ENST00000524817 P3H3Q8IVL6 736 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 164.8 ms