RNA–Protein interactions for RNA: ENST00000524226.5

PCM1-222, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 5,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-222ENST00000524226 POLA1P09884 1462 aaPredicted RBP3.75□□□□□ -1.81
PCM1-222ENST00000524226 RAD54L2Q9Y4B4 1467 aa3.75□□□□□ -1.81
PCM1-222ENST00000524226 ABCA10Q8WWZ4 1543 aa3.75□□□□□ -1.81
PCM1-222ENST00000524226 KIF21AQ7Z4S6 1674 aa3.75□□□□□ -1.81
PCM1-222ENST00000524226 IGF1RP08069 1367 aa3.74□□□□□ -1.81
PCM1-222ENST00000524226 URB2Q14146 1524 aaKnown RBP3.74□□□□□ -1.81
PCM1-222ENST00000524226 GAPVD1Q14C86 1478 aa3.73□□□□□ -1.81
PCM1-222ENST00000524226 FHAD1B1AJZ9 1412 aa3.73□□□□□ -1.81
PCM1-222ENST00000524226 P3H3Q8IVL6 736 aa3.72□□□□□ -1.81
PCM1-222ENST00000524226 IFT140Q96RY7 1462 aa3.72□□□□□ -1.81
PCM1-222ENST00000524226 TDRD9Q8NDG6 1382 aaKnown RBP3.72□□□□□ -1.81
PCM1-222ENST00000524226 ARAP1Q96P48 1450 aa3.72□□□□□ -1.81
PCM1-222ENST00000524226 EFCAB5A4FU69 1503 aa3.71□□□□□ -1.81
PCM1-222ENST00000524226 CTTNBP2Q8WZ74 1663 aa3.71□□□□□ -1.82
PCM1-222ENST00000524226 WDR97A6NE52 1622 aa3.7□□□□□ -1.82
PCM1-222ENST00000524226 ARHGAP35Q9NRY4 1499 aa3.7□□□□□ -1.82
PCM1-222ENST00000524226 GRIN2BQ13224 1484 aa3.7□□□□□ -1.82
PCM1-222ENST00000524226 FMN1Q68DA7 1419 aa3.7□□□□□ -1.82
PCM1-222ENST00000524226 PBRM1Q86U86 1689 aa3.7□□□□□ -1.82
PCM1-222ENST00000524226 ABCA5Q8WWZ7 1642 aa3.7□□□□□ -1.82
PCM1-222ENST00000524226 WDR62O43379 1518 aa3.69□□□□□ -1.82
PCM1-222ENST00000524226 CHMP7Q8WUX9 453 aaPredicted RBP3.69□□□□□ -1.82
PCM1-222ENST00000524226 ITGAEP38570 1179 aa3.69□□□□□ -1.82
PCM1-222ENST00000524226 FAM50AQ14320 339 aaKnown RBP3.69□□□□□ -1.82
PCM1-222ENST00000524226 DNAJC5BQ9UF47 199 aa3.69□□□□□ -1.82
PCM1-222ENST00000524226 FHOD3Q2V2M9 1422 aa3.69□□□□□ -1.82
PCM1-222ENST00000524226 AQRO60306 1485 aaKnown RBP eCLIP3.68□□□□□ -1.821e-7■■■□□ 18.8
PCM1-222ENST00000524226 FYCO1Q9BQS8 1478 aa3.68□□□□□ -1.82
PCM1-222ENST00000524226 ARID4BQ4LE39 1312 aaPredicted RBP3.68□□□□□ -1.82
PCM1-222ENST00000524226 TARBP1Q13395 1621 aaKnown RBP3.68□□□□□ -1.82
PCM1-222ENST00000524226 MTUS2Q5JR59 1369 aa3.68□□□□□ -1.82
PCM1-222ENST00000524226 ADAMTS12P58397 1594 aa3.68□□□□□ -1.82
PCM1-222ENST00000524226 RTL5Q5HYW3 569 aaPredicted RBP3.67□□□□□ -1.82
PCM1-222ENST00000524226 STAG3Q9UJ98 1225 aa3.67□□□□□ -1.82
PCM1-222ENST00000524226 TIAM1Q13009 1591 aa3.67□□□□□ -1.82
PCM1-222ENST00000524226 PCF11O94913 1555 aaKnown RBP3.67□□□□□ -1.82
PCM1-222ENST00000524226 SNAPC4Q5SXM2 1469 aa3.67□□□□□ -1.82
PCM1-222ENST00000524226 CASKIN1Q8WXD9 1431 aa3.67□□□□□ -1.82
PCM1-222ENST00000524226 IQGAP2Q13576 1575 aa3.67□□□□□ -1.82
PCM1-222ENST00000524226 CCNB3Q8WWL7 1395 aa3.66□□□□□ -1.82
PCM1-222ENST00000524226 MAP3K1Q13233 1512 aa3.66□□□□□ -1.82
PCM1-222ENST00000524226 CCDC18Q5T9S5 1454 aa3.66□□□□□ -1.82
PCM1-222ENST00000524226 KANK4Q5T7N3 995 aaPredicted RBP3.66□□□□□ -1.82
PCM1-222ENST00000524226 CDK11AQ9UQ88 783 aaPredicted RBP3.66□□□□□ -1.82
PCM1-222ENST00000524226 HECW1Q76N89 1606 aa3.66□□□□□ -1.82
PCM1-222ENST00000524226 CFAP43Q8NDM7 1665 aa3.66□□□□□ -1.82
PCM1-222ENST00000524226 SLC4A1APQ9BWU0 796 aaKnown RBP3.66□□□□□ -1.82
PCM1-222ENST00000524226 EIF4G3O43432 1585 aaKnown RBP3.66□□□□□ -1.82
PCM1-222ENST00000524226 LRRC9Q6ZRR7 1453 aa3.66□□□□□ -1.82
PCM1-222ENST00000524226 MAGI1Q96QZ7 1491 aaPredicted RBP3.66□□□□□ -1.82
PCM1-222ENST00000524226 CARMIL2Q6F5E8 1435 aa3.65□□□□□ -1.82
PCM1-222ENST00000524226 THOC2Q8NI27 1593 aaKnown RBP3.65□□□□□ -1.82
PCM1-222ENST00000524226 RRBP1Q9P2E9 1410 aaKnown RBP3.64□□□□□ -1.83
PCM1-222ENST00000524226 ZNF316A6NFI3 1004 aaPredicted RBP3.64□□□□□ -1.83
PCM1-222ENST00000524226 EHBP1L1Q8N3D4 1523 aa3.64□□□□□ -1.83
PCM1-222ENST00000524226 ZNF608Q9ULD9 1512 aaPredicted RBP3.64□□□□□ -1.83
PCM1-222ENST00000524226 SYNJ2O15056 1496 aa3.64□□□□□ -1.83
PCM1-222ENST00000524226 SCAF1Q9H7N4 1312 aaKnown RBP3.64□□□□□ -1.83
PCM1-222ENST00000524226 GRIN2AQ12879 1464 aa3.64□□□□□ -1.83
PCM1-222ENST00000524226 SAMD9Q5K651 1589 aa3.64□□□□□ -1.83
PCM1-222ENST00000524226 ARID3CA6NKF2 412 aa3.64□□□□□ -1.83
PCM1-222ENST00000524226 KIAA0586Q9BVV6 1533 aa3.63□□□□□ -1.83
PCM1-222ENST00000524226 FOXD1Q16676 465 aa3.63□□□□□ -1.83
PCM1-222ENST00000524226 SUPT6HQ7KZ85 1726 aaKnown RBP3.63□□□□□ -1.83
PCM1-222ENST00000524226 CLSPNQ9HAW4 1339 aa3.62□□□□□ -1.83
PCM1-222ENST00000524226 UGGT2Q9NYU1 1516 aa3.62□□□□□ -1.83
PCM1-222ENST00000524226 DCAF8L1A6NGE4 600 aa3.62□□□□□ -1.83
PCM1-222ENST00000524226 KIAA0556O60303 1618 aa3.62□□□□□ -1.83
PCM1-222ENST00000524226 SETD5Q9C0A6 1442 aa3.62□□□□□ -1.83
PCM1-222ENST00000524226 NCOA2Q15596 1464 aa3.61□□□□□ -1.83
PCM1-222ENST00000524226 PHLDB1Q86UU1 1377 aa3.61□□□□□ -1.83
PCM1-222ENST00000524226 C14orf37Q86TY3 774 aa3.61□□□□□ -1.83
PCM1-222ENST00000524226 MYOM3Q5VTT5 1437 aa3.61□□□□□ -1.83
PCM1-222ENST00000524226 ACIN1Q9UKV3 1341 aaKnown RBP3.61□□□□□ -1.83
PCM1-222ENST00000524226 FGD6Q6ZV73 1430 aa3.6□□□□□ -1.83
PCM1-222ENST00000524226 TRIM52Q96A61 297 aa3.6□□□□□ -1.83
PCM1-222ENST00000524226 RAPGEF6Q8TEU7 1601 aa3.6□□□□□ -1.83
PCM1-222ENST00000524226 EPRSP07814 1512 aaKnown RBP3.6□□□□□ -1.83
PCM1-222ENST00000524226 HAP1P54257 671 aaPredicted RBP3.6□□□□□ -1.83
PCM1-222ENST00000524226 PLEKHD1A6NEE1 506 aa3.6□□□□□ -1.83
PCM1-222ENST00000524226 JPH4Q96JJ6 628 aa3.6□□□□□ -1.83
PCM1-222ENST00000524226 CEP170Q5SW79 1584 aa3.6□□□□□ -1.83
PCM1-222ENST00000524226 DIEXFQ68CQ4 756 aaKnown RBP3.6□□□□□ -1.83
PCM1-222ENST00000524226 RAB3GAP2Q9H2M9 1393 aa3.6□□□□□ -1.83
PCM1-222ENST00000524226 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.6□□□□□ -1.83
PCM1-222ENST00000524226 ZNF777Q9ULD5 760 aaPredicted RBP3.59□□□□□ -1.83
PCM1-222ENST00000524226 NEUROD1Q13562 356 aa3.59□□□□□ -1.83
PCM1-222ENST00000524226 CDK13Q14004 1512 aaKnown RBP3.59□□□□□ -1.84
PCM1-222ENST00000524226 PTPN23Q9H3S7 1636 aa3.59□□□□□ -1.84
PCM1-222ENST00000524226 DHX57Q6P158 1386 aaKnown RBP3.58□□□□□ -1.84
PCM1-222ENST00000524226 NUP160Q12769 1436 aa3.58□□□□□ -1.84
PCM1-222ENST00000524226 CHIC2Q9UKJ5 165 aa3.58□□□□□ -1.84
PCM1-222ENST00000524226 PRG4Q92954 1404 aaPredicted RBP3.58□□□□□ -1.84
PCM1-222ENST00000524226 CFDP1Q9UEE9 299 aaPredicted RBP3.58□□□□□ -1.84
PCM1-222ENST00000524226 DISP1Q96F81 1524 aa3.58□□□□□ -1.84
PCM1-222ENST00000524226 PTPRGP23470 1445 aa3.58□□□□□ -1.84
PCM1-222ENST00000524226 MIA2Q96PC5 1412 aa3.58□□□□□ -1.84
PCM1-222ENST00000524226 ZBTB47Q9UFB7 747 aaPredicted RBP3.57□□□□□ -1.84
PCM1-222ENST00000524226 KIF14Q15058 1648 aa3.57□□□□□ -1.84
PCM1-222ENST00000524226 ITSN2Q9NZM3 1697 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms