RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 RUSC2Q8N2Y8 1516 aa40.55■■■■■ 4.08
PVT1-218ENST00000523328 ABCC10Q5T3U5 1492 aa40.31■■■■■ 4.04
PVT1-218ENST00000523328 MAPKBP1O60336 1514 aa40.3■■■■■ 4.04
PVT1-218ENST00000523328 ADCY10Q96PN6 1610 aa40.29■■■■■ 4.04
PVT1-218ENST00000523328 KIAA0586Q9BVV6 1533 aa40.27■■■■■ 4.04
PVT1-218ENST00000523328 IGF1RP08069 1367 aa40.27■■■■■ 4.04
PVT1-218ENST00000523328 FAM69CQ0P6D2 419 aa40.24■■■■■ 4.03
PVT1-218ENST00000523328 NPM1P06748 294 aaKnown RBP eCLIP40.23■■■■■ 4.03
PVT1-218ENST00000523328 CUL7Q14999 1698 aa40.23■■■■■ 4.03
PVT1-218ENST00000523328 DIP2BQ9P265 1576 aa40.22■■■■■ 4.03
PVT1-218ENST00000523328 KIF27Q86VH2 1401 aa40.21■■■■■ 4.03
PVT1-218ENST00000523328 CARMIL1Q5VZK9 1371 aa39.97■■■■□ 3.99
PVT1-218ENST00000523328 TSPOAP1O95153 1857 aa39.96■■■■□ 3.99
PVT1-218ENST00000523328 PTPRGP23470 1445 aa39.95■■■■□ 3.99
PVT1-218ENST00000523328 KDM6BO15054 1643 aa39.94■■■■□ 3.98
PVT1-218ENST00000523328 CARMIL2Q6F5E8 1435 aa39.85■■■■□ 3.97
PVT1-218ENST00000523328 TNIKQ9UKE5 1360 aa39.84■■■■□ 3.97
PVT1-218ENST00000523328 IQGAP2Q13576 1575 aa39.84■■■■□ 3.97
PVT1-218ENST00000523328 ABCC2Q92887 1545 aa39.82■■■■□ 3.97
PVT1-218ENST00000523328 TTBK1Q5TCY1 1321 aaPredicted RBP39.8■■■■□ 3.96
PVT1-218ENST00000523328 KDM4FA0A1W2PPD8 638 aa39.72■■■■□ 3.95
PVT1-218ENST00000523328 ASXL2Q76L83 1435 aa39.72■■■■□ 3.95
PVT1-218ENST00000523328 UHRF1BP1LA0JNW5 1464 aa39.71■■■■□ 3.95
PVT1-218ENST00000523328 DISP1Q96F81 1524 aa39.7■■■■□ 3.95
PVT1-218ENST00000523328 PLB1Q6P1J6 1458 aa39.68■■■■□ 3.94
PVT1-218ENST00000523328 GLI2P10070 1586 aa39.68■■■■□ 3.94
PVT1-218ENST00000523328 PPRC1Q5VV67 1664 aaKnown RBP39.68■■■■□ 3.94
PVT1-218ENST00000523328 UACAQ9BZF9 1416 aa39.65■■■■□ 3.94
PVT1-218ENST00000523328 UGGT2Q9NYU1 1516 aa39.58■■■■□ 3.93
PVT1-218ENST00000523328 RAPGEF2Q9Y4G8 1499 aa39.57■■■■□ 3.93
PVT1-218ENST00000523328 KDM5BQ9UGL1 1544 aa39.55■■■■□ 3.92
PVT1-218ENST00000523328 KIAA0556O60303 1618 aa39.5■■■■□ 3.91
PVT1-218ENST00000523328 EPRSP07814 1512 aaKnown RBP39.49■■■■□ 3.91
PVT1-218ENST00000523328 ZCCHC11Q5TAX3 1644 aaKnown RBP39.47■■■■□ 3.91
PVT1-218ENST00000523328 MAP3K4Q9Y6R4 1608 aa39.47■■■■□ 3.91
PVT1-218ENST00000523328 COL17A1Q9UMD9 1497 aaPredicted RBP39.42■■■■□ 3.9
PVT1-218ENST00000523328 TEX14Q8IWB6 1497 aa39.33■■■■□ 3.89
PVT1-218ENST00000523328 CTTNBP2Q8WZ74 1663 aa39.32■■■■□ 3.89
PVT1-218ENST00000523328 ADGRL1O94910 1474 aa39.3■■■■□ 3.88
PVT1-218ENST00000523328 WDR7Q9Y4E6 1490 aa39.26■■■■□ 3.88
PVT1-218ENST00000523328 GOLGA3Q08378 1498 aa39.17■■■■□ 3.86
PVT1-218ENST00000523328 ABCA8O94911 1581 aa39.16■■■■□ 3.86
PVT1-218ENST00000523328 CFAP43Q8NDM7 1665 aa39.1■■■■□ 3.85
PVT1-218ENST00000523328 PRXQ9BXM0 1461 aa39.1■■■■□ 3.85
PVT1-218ENST00000523328 MAGI3Q5TCQ9 1506 aa39.07■■■■□ 3.84
PVT1-218ENST00000523328 CD109Q6YHK3 1445 aa39.06■■■■□ 3.84
PVT1-218ENST00000523328 KCNH8Q96L42 1107 aa39■■■■□ 3.83
PVT1-218ENST00000523328 HECW2Q9P2P5 1572 aa38.91■■■■□ 3.82
PVT1-218ENST00000523328 ILDR1Q86SU0 546 aaPredicted RBP38.89■■■■□ 3.82
PVT1-218ENST00000523328 ATP10BO94823 1461 aa38.82■■■■□ 3.81
PVT1-218ENST00000523328 ARAP3Q8WWN8 1544 aa38.79■■■■□ 3.8
PVT1-218ENST00000523328 P3H3Q8IVL6 736 aa38.78■■■■□ 3.8
PVT1-218ENST00000523328 KIF21BO75037 1637 aa38.78■■■■□ 3.8
PVT1-218ENST00000523328 ARID3CA6NKF2 412 aa38.77■■■■□ 3.8
PVT1-218ENST00000523328 SAMD9Q5K651 1589 aa38.74■■■■□ 3.79
PVT1-218ENST00000523328 ABCA9Q8IUA7 1624 aa38.73■■■■□ 3.79
PVT1-218ENST00000523328 FAM9AQ8IZU1 332 aaPredicted RBP38.71■■■■□ 3.79
PVT1-218ENST00000523328 RAPGEF6Q8TEU7 1601 aa38.66■■■■□ 3.78
PVT1-218ENST00000523328 CSRNP3Q8WYN3 585 aa38.63■■■■□ 3.77
PVT1-218ENST00000523328 PHLDB1Q86UU1 1377 aa38.62■■■■□ 3.77
PVT1-218ENST00000523328 NEO1Q92859 1461 aa38.54■■■■□ 3.76
PVT1-218ENST00000523328 NUP153P49790 1475 aaKnown RBP38.52■■■■□ 3.76
PVT1-218ENST00000523328 ADAMTSL3P82987 1691 aa38.51■■■■□ 3.76
PVT1-218ENST00000523328 RAPGEF3O95398 923 aa38.5■■■■□ 3.75
PVT1-218ENST00000523328 FRMPD1Q5SYB0 1578 aa38.48■■■■□ 3.75
PVT1-218ENST00000523328 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.46■■■■□ 3.75
PVT1-218ENST00000523328 HNRNPUL2Q1KMD3 747 aaKnown RBP38.46■■■■□ 3.75
PVT1-218ENST00000523328 PTPRMP28827 1452 aa38.42■■■■□ 3.74
PVT1-218ENST00000523328 FHOD3Q2V2M9 1422 aa38.42■■■■□ 3.74
PVT1-218ENST00000523328 EEA1Q15075 1411 aa38.41■■■■□ 3.74
PVT1-218ENST00000523328 BCORL1Q5H9F3 1711 aa38.38■■■■□ 3.73
PVT1-218ENST00000523328 RANGAP1P46060 587 aaPredicted RBP38.36■■■■□ 3.73
PVT1-218ENST00000523328 MADDQ8WXG6 1647 aa38.3■■■■□ 3.72
PVT1-218ENST00000523328 RICTORQ6R327 1708 aa38.29■■■■□ 3.72
PVT1-218ENST00000523328 PLEKHD1A6NEE1 506 aa38.28■■■■□ 3.72
PVT1-218ENST00000523328 ARHGEF40Q8TER5 1519 aa38.27■■■■□ 3.72
PVT1-218ENST00000523328 DENND4BO75064 1496 aaPredicted RBP38.25■■■■□ 3.71
PVT1-218ENST00000523328 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.25■■■■□ 3.71
PVT1-218ENST00000523328 EFCAB5A4FU69 1503 aa38.23■■■■□ 3.71
PVT1-218ENST00000523328 AKNAQ7Z591 1439 aa38.23■■■■□ 3.71
PVT1-218ENST00000523328 ARID4BQ4LE39 1312 aaPredicted RBP38.23■■■■□ 3.71
PVT1-218ENST00000523328 CFAP74Q9C0B2 1584 aa38.22■■■■□ 3.71
PVT1-218ENST00000523328 FANCAO15360 1455 aa38.22■■■■□ 3.71
PVT1-218ENST00000523328 TTC37Q6PGP7 1564 aa38.2■■■■□ 3.71
PVT1-218ENST00000523328 PCF11O94913 1555 aaKnown RBP38.16■■■■□ 3.7
PVT1-218ENST00000523328 RIMS1Q86UR5 1692 aaKnown RBP38.14■■■■□ 3.7
PVT1-218ENST00000523328 ZMYM4Q5VZL5 1548 aa38.13■■■■□ 3.69
PVT1-218ENST00000523328 LMTK3Q96Q04 1460 aa38.13■■■■□ 3.69
PVT1-218ENST00000523328 CDK13Q14004 1512 aaKnown RBP38.09■■■■□ 3.69
PVT1-218ENST00000523328 FBXO41Q8TF61 875 aa38.09■■■■□ 3.69
PVT1-218ENST00000523328 SIGLEC1Q9BZZ2 1709 aa38.08■■■■□ 3.69
PVT1-218ENST00000523328 YEATS2Q9ULM3 1422 aa38.04■■■■□ 3.68
PVT1-218ENST00000523328 ZFYVE16Q7Z3T8 1539 aa38.04■■■■□ 3.68
PVT1-218ENST00000523328 MAGI2Q86UL8 1455 aa38■■■■□ 3.67
PVT1-218ENST00000523328 HECW1Q76N89 1606 aa37.99■■■■□ 3.67
PVT1-218ENST00000523328 POGZQ7Z3K3 1410 aa37.99■■■■□ 3.67
PVT1-218ENST00000523328 PLCH2O75038 1416 aa37.98■■■■□ 3.67
PVT1-218ENST00000523328 SCAPERQ9BY12 1400 aa37.94■■■■□ 3.66
PVT1-218ENST00000523328 FMN1Q68DA7 1419 aa37.88■■■■□ 3.66
PVT1-218ENST00000523328 FER1L4A9Z1Z3 1794 aa37.88■■■■□ 3.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms