RNA–Protein interactions for RNA: ENST00000523240.5

HDAC2-214, Transcript of histone deacetylase 2, humanhuman

TSL 5

Gene HDAC2, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-214ENST00000523240 JPH4Q96JJ6 628 aa38.01■■■■□ 3.68
HDAC2-214ENST00000523240 KIAA0586Q9BVV6 1533 aa38■■■■□ 3.67
HDAC2-214ENST00000523240 PRG4Q92954 1404 aaPredicted RBP37.99■■■■□ 3.67
HDAC2-214ENST00000523240 RAPGEF2Q9Y4G8 1499 aa37.96■■■■□ 3.67
HDAC2-214ENST00000523240 IQGAP2Q13576 1575 aa37.83■■■■□ 3.65
HDAC2-214ENST00000523240 CTTNBP2Q8WZ74 1663 aa37.71■■■■□ 3.63
HDAC2-214ENST00000523240 EEA1Q15075 1411 aa37.7■■■■□ 3.63
HDAC2-214ENST00000523240 PRXQ9BXM0 1461 aa37.7■■■■□ 3.63
HDAC2-214ENST00000523240 TRHP20396 242 aaPredicted RBP37.69■■■■□ 3.62
HDAC2-214ENST00000523240 CHIC1Q5VXU3 224 aa37.68■■■■□ 3.62
HDAC2-214ENST00000523240 CARMIL2Q6F5E8 1435 aa37.68■■■■□ 3.62
HDAC2-214ENST00000523240 CSRNP3Q8WYN3 585 aa37.66■■■■□ 3.62
HDAC2-214ENST00000523240 FAM9AQ8IZU1 332 aaPredicted RBP37.57■■■■□ 3.6
HDAC2-214ENST00000523240 UGGT2Q9NYU1 1516 aa37.55■■■■□ 3.6
HDAC2-214ENST00000523240 TTBK1Q5TCY1 1321 aaPredicted RBP37.54■■■■□ 3.6
HDAC2-214ENST00000523240 TNIKQ9UKE5 1360 aa37.51■■■■□ 3.59
HDAC2-214ENST00000523240 PTPRGP23470 1445 aa37.51■■■■□ 3.59
HDAC2-214ENST00000523240 DISP1Q96F81 1524 aa37.48■■■■□ 3.59
HDAC2-214ENST00000523240 KIAA0556O60303 1618 aa37.45■■■■□ 3.59
HDAC2-214ENST00000523240 ADCY10Q96PN6 1610 aa37.45■■■■□ 3.59
HDAC2-214ENST00000523240 NPM1P06748 294 aaKnown RBP eCLIP37.44■■■■□ 3.58
HDAC2-214ENST00000523240 GOLGA3Q08378 1498 aa37.39■■■■□ 3.58
HDAC2-214ENST00000523240 KIF21BO75037 1637 aa37.34■■■■□ 3.57
HDAC2-214ENST00000523240 UACAQ9BZF9 1416 aa37.25■■■■□ 3.55
HDAC2-214ENST00000523240 MAPKBP1O60336 1514 aa37.24■■■■□ 3.55
HDAC2-214ENST00000523240 ABCC2Q92887 1545 aa37.2■■■■□ 3.55
HDAC2-214ENST00000523240 UHRF1BP1LA0JNW5 1464 aa37.2■■■■□ 3.54
HDAC2-214ENST00000523240 KIF13AQ9H1H9 1805 aa37.17■■■■□ 3.54
HDAC2-214ENST00000523240 EHMT2Q96KQ7 1210 aa37.15■■■■□ 3.54
HDAC2-214ENST00000523240 RANGAP1P46060 587 aaPredicted RBP37.12■■■■□ 3.53
HDAC2-214ENST00000523240 P3H3Q8IVL6 736 aa37.11■■■■□ 3.53
HDAC2-214ENST00000523240 SAMD9Q5K651 1589 aa37.11■■■■□ 3.53
HDAC2-214ENST00000523240 UBTFP17480 764 aaKnown RBP37.08■■■■□ 3.53
HDAC2-214ENST00000523240 ABCC10Q5T3U5 1492 aa37.07■■■■□ 3.53
HDAC2-214ENST00000523240 PLB1Q6P1J6 1458 aa37.06■■■■□ 3.52
HDAC2-214ENST00000523240 DIP2BQ9P265 1576 aa37.05■■■■□ 3.52
HDAC2-214ENST00000523240 FAM69CQ0P6D2 419 aa37.04■■■■□ 3.52
HDAC2-214ENST00000523240 ZCCHC11Q5TAX3 1644 aaKnown RBP37.03■■■■□ 3.52
HDAC2-214ENST00000523240 KDM5BQ9UGL1 1544 aa37.02■■■■□ 3.52
HDAC2-214ENST00000523240 ABCA8O94911 1581 aa37.01■■■■□ 3.52
HDAC2-214ENST00000523240 ASXL2Q76L83 1435 aa36.99■■■■□ 3.51
HDAC2-214ENST00000523240 EFCAB5A4FU69 1503 aa36.95■■■■□ 3.5
HDAC2-214ENST00000523240 FHOD3Q2V2M9 1422 aa36.89■■■■□ 3.5
HDAC2-214ENST00000523240 TSPOAP1O95153 1857 aa36.88■■■■□ 3.49
HDAC2-214ENST00000523240 RAPGEF6Q8TEU7 1601 aa36.85■■■■□ 3.49
HDAC2-214ENST00000523240 WDR7Q9Y4E6 1490 aa36.78■■■■□ 3.48
HDAC2-214ENST00000523240 GLI2P10070 1586 aa36.78■■■■□ 3.48
HDAC2-214ENST00000523240 ARID3CA6NKF2 412 aa36.77■■■■□ 3.48
HDAC2-214ENST00000523240 EPRSP07814 1512 aaKnown RBP36.75■■■■□ 3.47
HDAC2-214ENST00000523240 ATP10BO94823 1461 aa36.68■■■■□ 3.46
HDAC2-214ENST00000523240 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.67■■■■□ 3.46
HDAC2-214ENST00000523240 HNRNPUL2Q1KMD3 747 aaKnown RBP36.67■■■■□ 3.46
HDAC2-214ENST00000523240 ARHGAP35Q9NRY4 1499 aa36.66■■■■□ 3.46
HDAC2-214ENST00000523240 MAP3K4Q9Y6R4 1608 aa36.63■■■■□ 3.45
HDAC2-214ENST00000523240 NUP153P49790 1475 aaKnown RBP36.63■■■■□ 3.45
HDAC2-214ENST00000523240 KCNH8Q96L42 1107 aa36.63■■■■□ 3.45
HDAC2-214ENST00000523240 FMN1Q68DA7 1419 aa36.59■■■■□ 3.45
HDAC2-214ENST00000523240 PPRC1Q5VV67 1664 aaKnown RBP36.58■■■■□ 3.45
HDAC2-214ENST00000523240 KDM6BO15054 1643 aa36.57■■■■□ 3.44
HDAC2-214ENST00000523240 CFAP43Q8NDM7 1665 aa36.55■■■■□ 3.44
HDAC2-214ENST00000523240 TEX14Q8IWB6 1497 aa36.52■■■■□ 3.44
HDAC2-214ENST00000523240 ATP1B4Q9UN42 357 aaPredicted RBP36.51■■■■□ 3.44
HDAC2-214ENST00000523240 HECW1Q76N89 1606 aa36.5■■■■□ 3.43
HDAC2-214ENST00000523240 CD109Q6YHK3 1445 aa36.46■■■■□ 3.43
HDAC2-214ENST00000523240 CLIP1P30622 1438 aa36.43■■■■□ 3.42
HDAC2-214ENST00000523240 PLEKHD1A6NEE1 506 aa36.42■■■■□ 3.42
HDAC2-214ENST00000523240 CDK13Q14004 1512 aaKnown RBP36.4■■■■□ 3.42
HDAC2-214ENST00000523240 ABCA9Q8IUA7 1624 aa36.37■■■■□ 3.41
HDAC2-214ENST00000523240 MAGI3Q5TCQ9 1506 aa36.37■■■■□ 3.41
HDAC2-214ENST00000523240 PCF11O94913 1555 aaKnown RBP36.31■■■■□ 3.4
HDAC2-214ENST00000523240 CDK11AQ9UQ88 783 aaPredicted RBP36.26■■■■□ 3.4
HDAC2-214ENST00000523240 CASKIN1Q8WXD9 1431 aa36.25■■■■□ 3.39
HDAC2-214ENST00000523240 LRRIQ1Q96JM4 1722 aa36.24■■■■□ 3.39
HDAC2-214ENST00000523240 CEP162Q5TB80 1403 aa36.21■■■■□ 3.39
HDAC2-214ENST00000523240 FYCO1Q9BQS8 1478 aa36.19■■■■□ 3.38
HDAC2-214ENST00000523240 CCDC18Q5T9S5 1454 aa36.18■■■■□ 3.38
HDAC2-214ENST00000523240 COL17A1Q9UMD9 1497 aaPredicted RBP36.18■■■■□ 3.38
HDAC2-214ENST00000523240 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.17■■■■□ 3.38
HDAC2-214ENST00000523240 LOC105371045A0A1W2PR82 267 aa36.15■■■■□ 3.38
HDAC2-214ENST00000523240 TTC37Q6PGP7 1564 aa36.15■■■■□ 3.38
HDAC2-214ENST00000523240 KIF14Q15058 1648 aa36.11■■■■□ 3.37
HDAC2-214ENST00000523240 PHLDB1Q86UU1 1377 aa36.1■■■■□ 3.37
HDAC2-214ENST00000523240 NEO1Q92859 1461 aa36.1■■■■□ 3.37
HDAC2-214ENST00000523240 TROQ12816 1431 aaPredicted RBP36.09■■■■□ 3.37
HDAC2-214ENST00000523240 CFAP74Q9C0B2 1584 aa36.07■■■■□ 3.37
HDAC2-214ENST00000523240 ARAP3Q8WWN8 1544 aa36.05■■■■□ 3.36
HDAC2-214ENST00000523240 MYO5CQ9NQX4 1742 aa36.03■■■■□ 3.36
HDAC2-214ENST00000523240 FANCAO15360 1455 aa36■■■■□ 3.35
HDAC2-214ENST00000523240 AEBP2Q6ZN18 517 aaPredicted RBP35.97■■■■□ 3.35
HDAC2-214ENST00000523240 PLCH2O75038 1416 aa35.92■■■■□ 3.34
HDAC2-214ENST00000523240 AKNAQ7Z591 1439 aa35.92■■■■□ 3.34
HDAC2-214ENST00000523240 RAPGEF3O95398 923 aa35.87■■■■□ 3.33
HDAC2-214ENST00000523240 DENND4BO75064 1496 aaPredicted RBP35.86■■■■□ 3.33
HDAC2-214ENST00000523240 ARHGAP5Q13017 1502 aa35.85■■■■□ 3.33
HDAC2-214ENST00000523240 EFCAB2Q5VUJ9 269 aa35.84■■■■□ 3.33
HDAC2-214ENST00000523240 FRMPD1Q5SYB0 1578 aa35.82■■■■□ 3.32
HDAC2-214ENST00000523240 ADGRL1O94910 1474 aa35.82■■■■□ 3.32
HDAC2-214ENST00000523240 MTUS2Q5JR59 1369 aa35.82■■■■□ 3.32
HDAC2-214ENST00000523240 RICTORQ6R327 1708 aa35.81■■■■□ 3.32
HDAC2-214ENST00000523240 PREX2Q70Z35 1606 aa35.79■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms