RNA–Protein interactions for RNA: ENST00000523240.5

HDAC2-214, Transcript of histone deacetylase 2, humanhuman

TSL 5

Gene HDAC2, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-214ENST00000523240 NISCHQ9Y2I1 1504 aa54.82■■■■■ 6.37
HDAC2-214ENST00000523240 CCDC180Q9P1Z9 1646 aa48.91■■■■■ 5.42
HDAC2-214ENST00000523240 ABCC9O60706 1549 aa48.01■■■■■ 5.28
HDAC2-214ENST00000523240 RB1CC1Q8TDY2 1594 aa46.13■■■■■ 4.97
HDAC2-214ENST00000523240 DCAF8L2P0C7V8 631 aa46■■■■■ 4.95
HDAC2-214ENST00000523240 NACADO15069 1562 aa45.99■■■■■ 4.95
HDAC2-214ENST00000523240 ZCCHC6Q5VYS8 1495 aaKnown RBP45.63■■■■■ 4.9
HDAC2-214ENST00000523240 MYO15BQ96JP2 1530 aa45.57■■■■■ 4.89
HDAC2-214ENST00000523240 DCAF1Q9Y4B6 1507 aa45.33■■■■■ 4.85
HDAC2-214ENST00000523240 UNC13AQ9UPW8 1703 aa45.09■■■■■ 4.81
HDAC2-214ENST00000523240 PABPN1Q86U42 306 aaKnown RBP eCLIP44.79■■■■■ 4.76
HDAC2-214ENST00000523240 BICRAQ9NZM4 1560 aa44.64■■■■■ 4.74
HDAC2-214ENST00000523240 SCRIBQ14160 1630 aa44.64■■■■■ 4.74
HDAC2-214ENST00000523240 SHROOM4Q9ULL8 1493 aa44.2■■■■■ 4.67
HDAC2-214ENST00000523240 DNAJC5BQ9UF47 199 aa44.07■■■■■ 4.65
HDAC2-214ENST00000523240 EIF4G1Q04637 1599 aaKnown RBP43.54■■■■■ 4.56
HDAC2-214ENST00000523240 CC2D2AQ9P2K1 1620 aa43.41■■■■■ 4.54
HDAC2-214ENST00000523240 CECR2Q9BXF3 1484 aa43.14■■■■■ 4.5
HDAC2-214ENST00000523240 SMARCA4P51532 1647 aa42.63■■■■■ 4.41
HDAC2-214ENST00000523240 BAZ1AQ9NRL2 1556 aaPredicted RBP42.56■■■■■ 4.4
HDAC2-214ENST00000523240 SMARCA2P51531 1590 aa42.4■■■■■ 4.38
HDAC2-214ENST00000523240 ATAD2BQ9ULI0 1458 aa42.38■■■■■ 4.38
HDAC2-214ENST00000523240 NCAPD3P42695 1498 aa42.36■■■■■ 4.37
HDAC2-214ENST00000523240 MROH2BQ7Z745 1585 aa42.24■■■■■ 4.35
HDAC2-214ENST00000523240 HMGXB3Q12766 1538 aa42.2■■■■■ 4.35
HDAC2-214ENST00000523240 PEG3Q9GZU2 1588 aa42.15■■■■■ 4.34
HDAC2-214ENST00000523240 BAZ1BQ9UIG0 1483 aaKnown RBP42.11■■■■■ 4.33
HDAC2-214ENST00000523240 WIZO95785 1651 aa41.84■■■■■ 4.29
HDAC2-214ENST00000523240 RSF1Q96T23 1441 aaPredicted RBP41.67■■■■■ 4.26
HDAC2-214ENST00000523240 ERCC6Q03468 1493 aa41.47■■■■■ 4.23
HDAC2-214ENST00000523240 NESP48681 1621 aa41.45■■■■■ 4.23
HDAC2-214ENST00000523240 TOP2AP11388 1531 aaKnown RBP41.38■■■■■ 4.21
HDAC2-214ENST00000523240 LAMC3Q9Y6N6 1575 aa41.37■■■■■ 4.21
HDAC2-214ENST00000523240 CADPSQ9ULU8 1353 aa41.14■■■■■ 4.18
HDAC2-214ENST00000523240 PDS5BQ9NTI5 1447 aa41.1■■■■■ 4.17
HDAC2-214ENST00000523240 KIF21AQ7Z4S6 1674 aa41.05■■■■■ 4.16
HDAC2-214ENST00000523240 CUX2O14529 1486 aa41.02■■■■■ 4.16
HDAC2-214ENST00000523240 THOC2Q8NI27 1593 aaKnown RBP40.89■■■■■ 4.14
HDAC2-214ENST00000523240 CFTRP13569 1480 aa40.85■■■■■ 4.13
HDAC2-214ENST00000523240 CCDC88BA6NC98 1476 aa40.84■■■■■ 4.13
HDAC2-214ENST00000523240 CEP164Q9UPV0 1460 aa40.73■■■■■ 4.11
HDAC2-214ENST00000523240 FANCD2Q9BXW9 1451 aa40.72■■■■■ 4.11
HDAC2-214ENST00000523240 PRDM2Q13029 1718 aa40.7■■■■■ 4.11
HDAC2-214ENST00000523240 MRC2Q9UBG0 1479 aa40.68■■■■■ 4.1
HDAC2-214ENST00000523240 SUPT5HO00267 1087 aaKnown RBP40.6■■■■■ 4.09
HDAC2-214ENST00000523240 WDR62O43379 1518 aa40.52■■■■■ 4.08
HDAC2-214ENST00000523240 URB2Q14146 1524 aaKnown RBP40.3■■■■■ 4.04
HDAC2-214ENST00000523240 ABCC8Q09428 1581 aa40.06■■■■■ 4
HDAC2-214ENST00000523240 TOPBP1Q92547 1522 aa40.04■■■■■ 4
HDAC2-214ENST00000523240 DNMBPQ6XZF7 1577 aa40.01■■■■■ 4
HDAC2-214ENST00000523240 DNAJC5Q9H3Z4 198 aa39.9■■■■□ 3.98
HDAC2-214ENST00000523240 IFT140Q96RY7 1462 aa39.85■■■■□ 3.97
HDAC2-214ENST00000523240 POLA1P09884 1462 aaPredicted RBP39.68■■■■□ 3.94
HDAC2-214ENST00000523240 CUX1P39880 1505 aa39.65■■■■□ 3.94
HDAC2-214ENST00000523240 ZNF608Q9ULD9 1512 aaPredicted RBP39.65■■■■□ 3.94
HDAC2-214ENST00000523240 TARBP1Q13395 1621 aaKnown RBP39.61■■■■□ 3.93
HDAC2-214ENST00000523240 FGD5Q6ZNL6 1462 aa39.59■■■■□ 3.93
HDAC2-214ENST00000523240 EIF4G3O43432 1585 aaKnown RBP39.56■■■■□ 3.92
HDAC2-214ENST00000523240 SOGA1O94964 1423 aa39.52■■■■□ 3.92
HDAC2-214ENST00000523240 RAD54L2Q9Y4B4 1467 aa39.51■■■■□ 3.92
HDAC2-214ENST00000523240 AQRO60306 1485 aaKnown RBP eCLIP39.41■■■■□ 3.93e-7■■■■■ 30.5
HDAC2-214ENST00000523240 WRNQ14191 1432 aaPredicted RBP eCLIP39.37■■■■□ 3.89
HDAC2-214ENST00000523240 WDR97A6NE52 1622 aa39.32■■■■□ 3.89
HDAC2-214ENST00000523240 TDRD9Q8NDG6 1382 aaKnown RBP39.32■■■■□ 3.88
HDAC2-214ENST00000523240 BIVM-ERCC5R4GMW8 1640 aa39.31■■■■□ 3.88
HDAC2-214ENST00000523240 TOP2BQ02880 1626 aa39.3■■■■□ 3.88
HDAC2-214ENST00000523240 OSCARQ8IYS5 282 aa39.28■■■■□ 3.88
HDAC2-214ENST00000523240 SYNJ1O43426 1573 aa39.27■■■■□ 3.88
HDAC2-214ENST00000523240 ABCA10Q8WWZ4 1543 aa39.16■■■■□ 3.86
HDAC2-214ENST00000523240 CHD1O14646 1710 aa39.14■■■■□ 3.86
HDAC2-214ENST00000523240 GRIN2BQ13224 1484 aa39.11■■■■□ 3.85
HDAC2-214ENST00000523240 PBRM1Q86U86 1689 aa39.09■■■■□ 3.85
HDAC2-214ENST00000523240 GAPVD1Q14C86 1478 aa39.09■■■■□ 3.85
HDAC2-214ENST00000523240 FBLN2P98095 1184 aa39.08■■■■□ 3.85
HDAC2-214ENST00000523240 SNAPC4Q5SXM2 1469 aa39.08■■■■□ 3.85
HDAC2-214ENST00000523240 ABCA5Q8WWZ7 1642 aa39.05■■■■□ 3.84
HDAC2-214ENST00000523240 MAGI1Q96QZ7 1491 aaPredicted RBP39.02■■■■□ 3.84
HDAC2-214ENST00000523240 CHMP7Q8WUX9 453 aaPredicted RBP38.9■■■■□ 3.82
HDAC2-214ENST00000523240 SYNJ2O15056 1496 aa38.86■■■■□ 3.81
HDAC2-214ENST00000523240 ERICH3Q5RHP9 1530 aa38.72■■■■□ 3.79
HDAC2-214ENST00000523240 ADAMTS12P58397 1594 aa38.71■■■■□ 3.79
HDAC2-214ENST00000523240 RIMBP3CA6NJZ7 1639 aa38.71■■■■□ 3.79
HDAC2-214ENST00000523240 RIMBP3BA6NNM3 1639 aa38.71■■■■□ 3.79
HDAC2-214ENST00000523240 RIMBP3Q9UFD9 1639 aa38.71■■■■□ 3.79
HDAC2-214ENST00000523240 TRIM41Q8WV44 630 aa38.66■■■■□ 3.78
HDAC2-214ENST00000523240 ARHGEF11O15085 1522 aa38.65■■■■□ 3.78
HDAC2-214ENST00000523240 FHAD1B1AJZ9 1412 aa38.62■■■■□ 3.77
HDAC2-214ENST00000523240 CLASP1Q7Z460 1538 aa38.61■■■■□ 3.77
HDAC2-214ENST00000523240 GRIN2AQ12879 1464 aa38.6■■■■□ 3.77
HDAC2-214ENST00000523240 KIF27Q86VH2 1401 aa38.58■■■■□ 3.77
HDAC2-214ENST00000523240 CEP170Q5SW79 1584 aa38.4■■■■□ 3.74
HDAC2-214ENST00000523240 CUL7Q14999 1698 aa38.39■■■■□ 3.74
HDAC2-214ENST00000523240 NUP160Q12769 1436 aa38.38■■■■□ 3.74
HDAC2-214ENST00000523240 IGF1RP08069 1367 aa38.34■■■■□ 3.73
HDAC2-214ENST00000523240 CYB5RLQ6IPT4 315 aa38.31■■■■□ 3.72
HDAC2-214ENST00000523240 ARAP1Q96P48 1450 aa38.3■■■■□ 3.72
HDAC2-214ENST00000523240 CARMIL1Q5VZK9 1371 aa38.19■■■■□ 3.7
HDAC2-214ENST00000523240 SHROOM2Q13796 1616 aa38.15■■■■□ 3.7
HDAC2-214ENST00000523240 RUSC2Q8N2Y8 1516 aa38.14■■■■□ 3.7
HDAC2-214ENST00000523240 ERCC6L2Q5T890 1561 aa38.06■■■■□ 3.68
Retrieved 100 of 20,778 RNA–protein pairs in 157.3 ms