RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 JPH4Q96JJ6 628 aa27.89■■■□□ 2.06
CLN8-206ENST00000523237 PRG4Q92954 1404 aaPredicted RBP27.88■■■□□ 2.05
CLN8-206ENST00000523237 CARMIL1Q5VZK9 1371 aa27.85■■■□□ 2.05
CLN8-206ENST00000523237 KIAA0586Q9BVV6 1533 aa27.82■■■□□ 2.04
CLN8-206ENST00000523237 RAPGEF2Q9Y4G8 1499 aa27.65■■■□□ 2.02
CLN8-206ENST00000523237 IQGAP2Q13576 1575 aa27.64■■■□□ 2.01
CLN8-206ENST00000523237 CARMIL2Q6F5E8 1435 aa27.56■■■□□ 2
CLN8-206ENST00000523237 ADCY10Q96PN6 1610 aa27.54■■■□□ 2
CLN8-206ENST00000523237 NPM1P06748 294 aaKnown RBP eCLIP27.5■■□□□ 1.99
CLN8-206ENST00000523237 PTPRGP23470 1445 aa27.5■■□□□ 1.99
CLN8-206ENST00000523237 TNIKQ9UKE5 1360 aa27.48■■□□□ 1.99
CLN8-206ENST00000523237 CTTNBP2Q8WZ74 1663 aa27.47■■□□□ 1.99
CLN8-206ENST00000523237 KIF13AQ9H1H9 1805 aa27.46■■□□□ 1.99
CLN8-206ENST00000523237 UGGT2Q9NYU1 1516 aa27.45■■□□□ 1.98
CLN8-206ENST00000523237 MAPKBP1O60336 1514 aa27.44■■□□□ 1.98
CLN8-206ENST00000523237 DISP1Q96F81 1524 aa27.44■■□□□ 1.98
CLN8-206ENST00000523237 PRXQ9BXM0 1461 aa27.44■■□□□ 1.98
CLN8-206ENST00000523237 TTBK1Q5TCY1 1321 aaPredicted RBP27.41■■□□□ 1.98
CLN8-206ENST00000523237 KIAA0556O60303 1618 aa27.38■■□□□ 1.97
CLN8-206ENST00000523237 ABCC10Q5T3U5 1492 aa27.35■■□□□ 1.97
CLN8-206ENST00000523237 ABCC2Q92887 1545 aa27.31■■□□□ 1.96
CLN8-206ENST00000523237 DIP2BQ9P265 1576 aa27.31■■□□□ 1.96
CLN8-206ENST00000523237 CSRNP3Q8WYN3 585 aa27.31■■□□□ 1.96
CLN8-206ENST00000523237 UHRF1BP1LA0JNW5 1464 aa27.31■■□□□ 1.96
CLN8-206ENST00000523237 FAM69CQ0P6D2 419 aa27.3■■□□□ 1.96
CLN8-206ENST00000523237 EEA1Q15075 1411 aa27.3■■□□□ 1.96
CLN8-206ENST00000523237 UACAQ9BZF9 1416 aa27.3■■□□□ 1.96
CLN8-206ENST00000523237 GOLGA3Q08378 1498 aa27.28■■□□□ 1.96
CLN8-206ENST00000523237 ASXL2Q76L83 1435 aa27.17■■□□□ 1.94
CLN8-206ENST00000523237 KDM5BQ9UGL1 1544 aa27.17■■□□□ 1.94
CLN8-206ENST00000523237 PLB1Q6P1J6 1458 aa27.17■■□□□ 1.94
CLN8-206ENST00000523237 ZCCHC11Q5TAX3 1644 aaKnown RBP27.15■■□□□ 1.94
CLN8-206ENST00000523237 TSPOAP1O95153 1857 aa27.14■■□□□ 1.94
CLN8-206ENST00000523237 FAM9AQ8IZU1 332 aaPredicted RBP27.12■■□□□ 1.93
CLN8-206ENST00000523237 ABCA8O94911 1581 aa27.09■■□□□ 1.93
CLN8-206ENST00000523237 CHIC1Q5VXU3 224 aa27.08■■□□□ 1.93
CLN8-206ENST00000523237 GLI2P10070 1586 aa27.08■■□□□ 1.93
CLN8-206ENST00000523237 KIF21BO75037 1637 aa27.06■■□□□ 1.92
CLN8-206ENST00000523237 SAMD9Q5K651 1589 aa27.05■■□□□ 1.92
CLN8-206ENST00000523237 EPRSP07814 1512 aaKnown RBP27.01■■□□□ 1.91
CLN8-206ENST00000523237 P3H3Q8IVL6 736 aa27.01■■□□□ 1.91
CLN8-206ENST00000523237 KDM6BO15054 1643 aa27■■□□□ 1.91
CLN8-206ENST00000523237 WDR7Q9Y4E6 1490 aa26.98■■□□□ 1.91
CLN8-206ENST00000523237 PPRC1Q5VV67 1664 aaKnown RBP26.97■■□□□ 1.91
CLN8-206ENST00000523237 MAP3K4Q9Y6R4 1608 aa26.96■■□□□ 1.91
CLN8-206ENST00000523237 RANGAP1P46060 587 aaPredicted RBP26.91■■□□□ 1.9
CLN8-206ENST00000523237 RAPGEF6Q8TEU7 1601 aa26.89■■□□□ 1.9
CLN8-206ENST00000523237 TEX14Q8IWB6 1497 aa26.87■■□□□ 1.89
CLN8-206ENST00000523237 EFCAB5A4FU69 1503 aa26.86■■□□□ 1.89
CLN8-206ENST00000523237 FHOD3Q2V2M9 1422 aa26.85■■□□□ 1.89
CLN8-206ENST00000523237 ATP10BO94823 1461 aa26.84■■□□□ 1.89
CLN8-206ENST00000523237 CFAP43Q8NDM7 1665 aa26.84■■□□□ 1.89
CLN8-206ENST00000523237 ARID3CA6NKF2 412 aa26.82■■□□□ 1.88
CLN8-206ENST00000523237 AEBP2Q6ZN18 517 aaPredicted RBP26.82■■□□□ 1.88
CLN8-206ENST00000523237 KCNH8Q96L42 1107 aa26.82■■□□□ 1.88
CLN8-206ENST00000523237 UBTFP17480 764 aaKnown RBP26.81■■□□□ 1.88
CLN8-206ENST00000523237 EHMT2Q96KQ7 1210 aa26.8■■□□□ 1.88
CLN8-206ENST00000523237 CD109Q6YHK3 1445 aa26.77■■□□□ 1.88
CLN8-206ENST00000523237 NUP153P49790 1475 aaKnown RBP26.75■■□□□ 1.87
CLN8-206ENST00000523237 MAGI3Q5TCQ9 1506 aa26.75■■□□□ 1.87
CLN8-206ENST00000523237 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.72■■□□□ 1.87
CLN8-206ENST00000523237 HNRNPUL2Q1KMD3 747 aaKnown RBP26.72■■□□□ 1.87
CLN8-206ENST00000523237 COL17A1Q9UMD9 1497 aaPredicted RBP26.7■■□□□ 1.87
CLN8-206ENST00000523237 ABCA9Q8IUA7 1624 aa26.68■■□□□ 1.86
CLN8-206ENST00000523237 ARHGAP35Q9NRY4 1499 aa26.62■■□□□ 1.85
CLN8-206ENST00000523237 FMN1Q68DA7 1419 aa26.61■■□□□ 1.85
CLN8-206ENST00000523237 PLEKHD1A6NEE1 506 aa26.59■■□□□ 1.85
CLN8-206ENST00000523237 HECW1Q76N89 1606 aa26.55■■□□□ 1.84
CLN8-206ENST00000523237 CDK13Q14004 1512 aaKnown RBP26.53■■□□□ 1.84
CLN8-206ENST00000523237 ARAP3Q8WWN8 1544 aa26.53■■□□□ 1.84
CLN8-206ENST00000523237 PHLDB1Q86UU1 1377 aa26.52■■□□□ 1.84
CLN8-206ENST00000523237 KDM4FA0A1W2PPD8 638 aa26.5■■□□□ 1.83
CLN8-206ENST00000523237 ATP1B4Q9UN42 357 aaPredicted RBP26.49■■□□□ 1.83
CLN8-206ENST00000523237 NEO1Q92859 1461 aa26.49■■□□□ 1.83
CLN8-206ENST00000523237 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.46■■□□□ 1.83
CLN8-206ENST00000523237 ADGRL1O94910 1474 aa26.42■■□□□ 1.82
CLN8-206ENST00000523237 TTC37Q6PGP7 1564 aa26.42■■□□□ 1.82
CLN8-206ENST00000523237 CFAP74Q9C0B2 1584 aa26.41■■□□□ 1.82
CLN8-206ENST00000523237 CDK11AQ9UQ88 783 aaPredicted RBP26.4■■□□□ 1.82
CLN8-206ENST00000523237 LRRIQ1Q96JM4 1722 aa26.39■■□□□ 1.82
CLN8-206ENST00000523237 FANCAO15360 1455 aa26.36■■□□□ 1.81
CLN8-206ENST00000523237 PCF11O94913 1555 aaKnown RBP26.35■■□□□ 1.81
CLN8-206ENST00000523237 CLIP1P30622 1438 aa26.35■■□□□ 1.81
CLN8-206ENST00000523237 CASKIN1Q8WXD9 1431 aa26.34■■□□□ 1.81
CLN8-206ENST00000523237 RAPGEF3O95398 923 aa26.34■■□□□ 1.81
CLN8-206ENST00000523237 FRMPD1Q5SYB0 1578 aa26.33■■□□□ 1.8
CLN8-206ENST00000523237 AKNAQ7Z591 1439 aa26.32■■□□□ 1.8
CLN8-206ENST00000523237 KIF14Q15058 1648 aa26.32■■□□□ 1.8
CLN8-206ENST00000523237 MYO5CQ9NQX4 1742 aa26.31■■□□□ 1.8
CLN8-206ENST00000523237 TROQ12816 1431 aaPredicted RBP26.31■■□□□ 1.8
CLN8-206ENST00000523237 CCDC18Q5T9S5 1454 aa26.3■■□□□ 1.8
CLN8-206ENST00000523237 DENND4BO75064 1496 aaPredicted RBP26.3■■□□□ 1.8
CLN8-206ENST00000523237 RICTORQ6R327 1708 aa26.29■■□□□ 1.8
CLN8-206ENST00000523237 PLCH2O75038 1416 aa26.29■■□□□ 1.8
CLN8-206ENST00000523237 FYCO1Q9BQS8 1478 aa26.28■■□□□ 1.8
CLN8-206ENST00000523237 ZMYM4Q5VZL5 1548 aa26.19■■□□□ 1.78
CLN8-206ENST00000523237 ARHGEF40Q8TER5 1519 aa26.19■■□□□ 1.78
CLN8-206ENST00000523237 EFCAB2Q5VUJ9 269 aa26.18■■□□□ 1.78
CLN8-206ENST00000523237 SCAPERQ9BY12 1400 aa26.16■■□□□ 1.78
CLN8-206ENST00000523237 ARHGAP5Q13017 1502 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms