RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 ERCC6L2Q5T890 1561 aa27.74■■■□□ 2.03
PABPC1-221ENST00000522720 KIAA0586Q9BVV6 1533 aa27.72■■■□□ 2.03
PABPC1-221ENST00000522720 PRG4Q92954 1404 aaPredicted RBP27.69■■■□□ 2.02
PABPC1-221ENST00000522720 RAPGEF2Q9Y4G8 1499 aa27.66■■■□□ 2.02
PABPC1-221ENST00000522720 CHIC1Q5VXU3 224 aa27.54■■■□□ 2
PABPC1-221ENST00000522720 PRXQ9BXM0 1461 aa27.54■■■□□ 2
PABPC1-221ENST00000522720 IQGAP2Q13576 1575 aa27.52■■■□□ 2
PABPC1-221ENST00000522720 CSRNP3Q8WYN3 585 aa27.51■■□□□ 1.99
PABPC1-221ENST00000522720 EEA1Q15075 1411 aa27.49■■□□□ 1.99
PABPC1-221ENST00000522720 CARMIL2Q6F5E8 1435 aa27.42■■□□□ 1.98
PABPC1-221ENST00000522720 TRHP20396 242 aaPredicted RBP27.41■■□□□ 1.98
PABPC1-221ENST00000522720 UGGT2Q9NYU1 1516 aa27.39■■□□□ 1.98
PABPC1-221ENST00000522720 CTTNBP2Q8WZ74 1663 aa27.38■■□□□ 1.97
PABPC1-221ENST00000522720 PTPRGP23470 1445 aa27.36■■□□□ 1.97
PABPC1-221ENST00000522720 FAM9AQ8IZU1 332 aaPredicted RBP27.36■■□□□ 1.97
PABPC1-221ENST00000522720 DISP1Q96F81 1524 aa27.36■■□□□ 1.97
PABPC1-221ENST00000522720 TNIKQ9UKE5 1360 aa27.35■■□□□ 1.97
PABPC1-221ENST00000522720 ADCY10Q96PN6 1610 aa27.27■■□□□ 1.96
PABPC1-221ENST00000522720 TTBK1Q5TCY1 1321 aaPredicted RBP27.27■■□□□ 1.96
PABPC1-221ENST00000522720 NPM1P06748 294 aaKnown RBP eCLIP27.25■■□□□ 1.95
PABPC1-221ENST00000522720 KIAA0556O60303 1618 aa27.25■■□□□ 1.95
PABPC1-221ENST00000522720 GOLGA3Q08378 1498 aa27.22■■□□□ 1.95
PABPC1-221ENST00000522720 KIF21BO75037 1637 aa27.19■■□□□ 1.94
PABPC1-221ENST00000522720 UACAQ9BZF9 1416 aa27.16■■□□□ 1.94
PABPC1-221ENST00000522720 UHRF1BP1LA0JNW5 1464 aa27.14■■□□□ 1.94
PABPC1-221ENST00000522720 MAPKBP1O60336 1514 aa27.13■■□□□ 1.93
PABPC1-221ENST00000522720 ABCC2Q92887 1545 aa27.11■■□□□ 1.93
PABPC1-221ENST00000522720 KIF13AQ9H1H9 1805 aa27.05■■□□□ 1.92
PABPC1-221ENST00000522720 P3H3Q8IVL6 736 aa27.04■■□□□ 1.92
PABPC1-221ENST00000522720 ABCC10Q5T3U5 1492 aa27.04■■□□□ 1.92
PABPC1-221ENST00000522720 SAMD9Q5K651 1589 aa27.03■■□□□ 1.92
PABPC1-221ENST00000522720 PLB1Q6P1J6 1458 aa27.02■■□□□ 1.92
PABPC1-221ENST00000522720 KDM5BQ9UGL1 1544 aa27.01■■□□□ 1.91
PABPC1-221ENST00000522720 UBTFP17480 764 aaKnown RBP27■■□□□ 1.91
PABPC1-221ENST00000522720 FAM69CQ0P6D2 419 aa27■■□□□ 1.91
PABPC1-221ENST00000522720 EHMT2Q96KQ7 1210 aa26.99■■□□□ 1.91
PABPC1-221ENST00000522720 ABCA8O94911 1581 aa26.99■■□□□ 1.91
PABPC1-221ENST00000522720 RANGAP1P46060 587 aaPredicted RBP26.98■■□□□ 1.91
PABPC1-221ENST00000522720 DIP2BQ9P265 1576 aa26.97■■□□□ 1.91
PABPC1-221ENST00000522720 ASXL2Q76L83 1435 aa26.96■■□□□ 1.91
PABPC1-221ENST00000522720 ZCCHC11Q5TAX3 1644 aaKnown RBP26.93■■□□□ 1.9
PABPC1-221ENST00000522720 EFCAB5A4FU69 1503 aa26.89■■□□□ 1.89
PABPC1-221ENST00000522720 FHOD3Q2V2M9 1422 aa26.87■■□□□ 1.89
PABPC1-221ENST00000522720 GLI2P10070 1586 aa26.81■■□□□ 1.88
PABPC1-221ENST00000522720 RAPGEF6Q8TEU7 1601 aa26.8■■□□□ 1.88
PABPC1-221ENST00000522720 EPRSP07814 1512 aaKnown RBP26.8■■□□□ 1.88
PABPC1-221ENST00000522720 WDR7Q9Y4E6 1490 aa26.79■■□□□ 1.88
PABPC1-221ENST00000522720 ATP10BO94823 1461 aa26.78■■□□□ 1.88
PABPC1-221ENST00000522720 TSPOAP1O95153 1857 aa26.77■■□□□ 1.88
PABPC1-221ENST00000522720 ARID3CA6NKF2 412 aa26.76■■□□□ 1.87
PABPC1-221ENST00000522720 ARHGAP35Q9NRY4 1499 aa26.74■■□□□ 1.87
PABPC1-221ENST00000522720 NUP153P49790 1475 aaKnown RBP26.72■■□□□ 1.87
PABPC1-221ENST00000522720 KCNH8Q96L42 1107 aa26.69■■□□□ 1.86
PABPC1-221ENST00000522720 MAP3K4Q9Y6R4 1608 aa26.67■■□□□ 1.86
PABPC1-221ENST00000522720 FMN1Q68DA7 1419 aa26.65■■□□□ 1.86
PABPC1-221ENST00000522720 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.65■■□□□ 1.86
PABPC1-221ENST00000522720 HNRNPUL2Q1KMD3 747 aaKnown RBP26.65■■□□□ 1.86
PABPC1-221ENST00000522720 PPRC1Q5VV67 1664 aaKnown RBP26.65■■□□□ 1.86
PABPC1-221ENST00000522720 CFAP43Q8NDM7 1665 aa26.58■■□□□ 1.85
PABPC1-221ENST00000522720 CD109Q6YHK3 1445 aa26.57■■□□□ 1.84
PABPC1-221ENST00000522720 TEX14Q8IWB6 1497 aa26.57■■□□□ 1.84
PABPC1-221ENST00000522720 KDM6BO15054 1643 aa26.57■■□□□ 1.84
PABPC1-221ENST00000522720 PLEKHD1A6NEE1 506 aa26.56■■□□□ 1.84
PABPC1-221ENST00000522720 CLIP1P30622 1438 aa26.54■■□□□ 1.84
PABPC1-221ENST00000522720 MAGI3Q5TCQ9 1506 aa26.54■■□□□ 1.84
PABPC1-221ENST00000522720 ATP1B4Q9UN42 357 aaPredicted RBP26.53■■□□□ 1.84
PABPC1-221ENST00000522720 HECW1Q76N89 1606 aa26.52■■□□□ 1.84
PABPC1-221ENST00000522720 CDK13Q14004 1512 aaKnown RBP26.5■■□□□ 1.83
PABPC1-221ENST00000522720 ABCA9Q8IUA7 1624 aa26.5■■□□□ 1.83
PABPC1-221ENST00000522720 COL17A1Q9UMD9 1497 aaPredicted RBP26.45■■□□□ 1.82
PABPC1-221ENST00000522720 CASKIN1Q8WXD9 1431 aa26.44■■□□□ 1.82
PABPC1-221ENST00000522720 LOC105371045A0A1W2PR82 267 aa26.42■■□□□ 1.82
PABPC1-221ENST00000522720 CDK11AQ9UQ88 783 aaPredicted RBP26.42■■□□□ 1.82
PABPC1-221ENST00000522720 PCF11O94913 1555 aaKnown RBP26.39■■□□□ 1.82
PABPC1-221ENST00000522720 LRRIQ1Q96JM4 1722 aa26.39■■□□□ 1.81
PABPC1-221ENST00000522720 CEP162Q5TB80 1403 aa26.39■■□□□ 1.81
PABPC1-221ENST00000522720 FYCO1Q9BQS8 1478 aa26.36■■□□□ 1.81
PABPC1-221ENST00000522720 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.35■■□□□ 1.817e-8■□□□□ 10.3
PABPC1-221ENST00000522720 PHLDB1Q86UU1 1377 aa26.34■■□□□ 1.81
PABPC1-221ENST00000522720 CCDC18Q5T9S5 1454 aa26.33■■□□□ 1.81
PABPC1-221ENST00000522720 TROQ12816 1431 aaPredicted RBP26.31■■□□□ 1.8
PABPC1-221ENST00000522720 ARAP3Q8WWN8 1544 aa26.31■■□□□ 1.8
PABPC1-221ENST00000522720 NEO1Q92859 1461 aa26.3■■□□□ 1.8
PABPC1-221ENST00000522720 TTC37Q6PGP7 1564 aa26.29■■□□□ 1.8
PABPC1-221ENST00000522720 KIF14Q15058 1648 aa26.23■■□□□ 1.79
PABPC1-221ENST00000522720 FANCAO15360 1455 aa26.23■■□□□ 1.79
PABPC1-221ENST00000522720 PLCH2O75038 1416 aa26.22■■□□□ 1.79
PABPC1-221ENST00000522720 AKNAQ7Z591 1439 aa26.19■■□□□ 1.78
PABPC1-221ENST00000522720 CFAP74Q9C0B2 1584 aa26.19■■□□□ 1.78
PABPC1-221ENST00000522720 RAPGEF3O95398 923 aa26.18■■□□□ 1.78
PABPC1-221ENST00000522720 MYO5CQ9NQX4 1742 aa26.17■■□□□ 1.78
PABPC1-221ENST00000522720 EFCAB2Q5VUJ9 269 aa26.15■■□□□ 1.78
PABPC1-221ENST00000522720 AEBP2Q6ZN18 517 aaPredicted RBP26.12■■□□□ 1.77
PABPC1-221ENST00000522720 DENND4BO75064 1496 aaPredicted RBP26.11■■□□□ 1.77
PABPC1-221ENST00000522720 FRMPD1Q5SYB0 1578 aa26.1■■□□□ 1.77
PABPC1-221ENST00000522720 VPS8Q8N3P4 1428 aa26.08■■□□□ 1.77
PABPC1-221ENST00000522720 KDM4FA0A1W2PPD8 638 aa26.08■■□□□ 1.77
PABPC1-221ENST00000522720 ADGRL1O94910 1474 aa26.07■■□□□ 1.76
PABPC1-221ENST00000522720 RICTORQ6R327 1708 aa26.07■■□□□ 1.76
PABPC1-221ENST00000522720 MTUS2Q5JR59 1369 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms