RNA–Protein interactions for RNA: ENST00000521580.2

SMIM12-206, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM12, Length 3,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-206ENST00000521580 MRC2Q9UBG0 1479 aa20.94■□□□□ 0.94
SMIM12-206ENST00000521580 ITGAEP38570 1179 aa20.9■□□□□ 0.94
SMIM12-206ENST00000521580 TIAM1Q13009 1591 aa20.9■□□□□ 0.94
SMIM12-206ENST00000521580 TARBP1Q13395 1621 aaKnown RBP20.9■□□□□ 0.94
SMIM12-206ENST00000521580 RRBP1Q9P2E9 1410 aaKnown RBP20.9■□□□□ 0.94
SMIM12-206ENST00000521580 CCNB3Q8WWL7 1395 aa20.89■□□□□ 0.94
SMIM12-206ENST00000521580 AQRO60306 1485 aaKnown RBP eCLIP20.88■□□□□ 0.93
SMIM12-206ENST00000521580 EFCAB5A4FU69 1503 aa20.88■□□□□ 0.93
SMIM12-206ENST00000521580 CTTNBP2Q8WZ74 1663 aa20.87■□□□□ 0.93
SMIM12-206ENST00000521580 MAP3K1Q13233 1512 aa20.86■□□□□ 0.93
SMIM12-206ENST00000521580 PCF11O94913 1555 aaKnown RBP20.86■□□□□ 0.93
SMIM12-206ENST00000521580 LRRC9Q6ZRR7 1453 aa20.85■□□□□ 0.93
SMIM12-206ENST00000521580 FMN1Q68DA7 1419 aa20.81■□□□□ 0.92
SMIM12-206ENST00000521580 CASKIN1Q8WXD9 1431 aa20.8■□□□□ 0.92
SMIM12-206ENST00000521580 ERCC6Q03468 1493 aa20.8■□□□□ 0.92
SMIM12-206ENST00000521580 FYCO1Q9BQS8 1478 aa20.79■□□□□ 0.92
SMIM12-206ENST00000521580 FAM50AQ14320 339 aaKnown RBP20.77■□□□□ 0.92
SMIM12-206ENST00000521580 PHLDB1Q86UU1 1377 aa20.77■□□□□ 0.92
SMIM12-206ENST00000521580 IFT140Q96RY7 1462 aa20.76■□□□□ 0.91
SMIM12-206ENST00000521580 GRIN2BQ13224 1484 aa20.75■□□□□ 0.91
SMIM12-206ENST00000521580 ZNF608Q9ULD9 1512 aaPredicted RBP20.75■□□□□ 0.91
SMIM12-206ENST00000521580 PBRM1Q86U86 1689 aa20.74■□□□□ 0.91
SMIM12-206ENST00000521580 WDR62O43379 1518 aa20.73■□□□□ 0.91
SMIM12-206ENST00000521580 CFAP43Q8NDM7 1665 aa20.73■□□□□ 0.91
SMIM12-206ENST00000521580 DHX57Q6P158 1386 aaKnown RBP20.71■□□□□ 0.91
SMIM12-206ENST00000521580 SAMD9Q5K651 1589 aa20.7■□□□□ 0.9
SMIM12-206ENST00000521580 ADAMTS12P58397 1594 aa20.69■□□□□ 0.9
SMIM12-206ENST00000521580 MTUS2Q5JR59 1369 aa20.68■□□□□ 0.9
SMIM12-206ENST00000521580 SNAPC4Q5SXM2 1469 aa20.68■□□□□ 0.9
SMIM12-206ENST00000521580 DIEXFQ68CQ4 756 aaKnown RBP20.68■□□□□ 0.9
SMIM12-206ENST00000521580 ZNF316A6NFI3 1004 aaPredicted RBP20.66■□□□□ 0.9
SMIM12-206ENST00000521580 CLSPNQ9HAW4 1339 aa20.65■□□□□ 0.9
SMIM12-206ENST00000521580 IQGAP2Q13576 1575 aa20.63■□□□□ 0.89
SMIM12-206ENST00000521580 RAB3GAP2Q9H2M9 1393 aa20.61■□□□□ 0.89
SMIM12-206ENST00000521580 FBLN2P98095 1184 aa20.57■□□□□ 0.88
SMIM12-206ENST00000521580 ARID3CA6NKF2 412 aa20.57■□□□□ 0.88
SMIM12-206ENST00000521580 SETD5Q9C0A6 1442 aa20.57■□□□□ 0.88
SMIM12-206ENST00000521580 EIF4G3O43432 1585 aaKnown RBP20.56■□□□□ 0.88
SMIM12-206ENST00000521580 CHMP7Q8WUX9 453 aaPredicted RBP20.56■□□□□ 0.88
SMIM12-206ENST00000521580 THOC2Q8NI27 1593 aaKnown RBP20.54■□□□□ 0.88
SMIM12-206ENST00000521580 FGD6Q6ZV73 1430 aa20.53■□□□□ 0.88
SMIM12-206ENST00000521580 GRIN2AQ12879 1464 aa20.51■□□□□ 0.87
SMIM12-206ENST00000521580 KIAA0586Q9BVV6 1533 aa20.51■□□□□ 0.87
SMIM12-206ENST00000521580 NCOA2Q15596 1464 aa20.5■□□□□ 0.87
SMIM12-206ENST00000521580 LRRIQ1Q96JM4 1722 aa20.49■□□□□ 0.87
SMIM12-206ENST00000521580 UGGT2Q9NYU1 1516 aa20.49■□□□□ 0.87
SMIM12-206ENST00000521580 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.48■□□□□ 0.87
SMIM12-206ENST00000521580 CCDC18Q5T9S5 1454 aa20.48■□□□□ 0.87
SMIM12-206ENST00000521580 EHBP1L1Q8N3D4 1523 aa20.46■□□□□ 0.87
SMIM12-206ENST00000521580 MAGI1Q96QZ7 1491 aaPredicted RBP20.46■□□□□ 0.87
SMIM12-206ENST00000521580 HECW1Q76N89 1606 aa20.46■□□□□ 0.87
SMIM12-206ENST00000521580 MYOM3Q5VTT5 1437 aa20.46■□□□□ 0.87
SMIM12-206ENST00000521580 EPRSP07814 1512 aaKnown RBP20.44■□□□□ 0.86
SMIM12-206ENST00000521580 SUPT6HQ7KZ85 1726 aaKnown RBP20.43■□□□□ 0.86
SMIM12-206ENST00000521580 SYNJ2O15056 1496 aa20.42■□□□□ 0.86
SMIM12-206ENST00000521580 CDK13Q14004 1512 aaKnown RBP20.42■□□□□ 0.86
SMIM12-206ENST00000521580 MAGI3Q5TCQ9 1506 aa20.42■□□□□ 0.86
SMIM12-206ENST00000521580 DISP1Q96F81 1524 aa20.41■□□□□ 0.86
SMIM12-206ENST00000521580 KIAA0556O60303 1618 aa20.39■□□□□ 0.85
SMIM12-206ENST00000521580 MAPKBP1O60336 1514 aa20.37■□□□□ 0.85
SMIM12-206ENST00000521580 NEUROD1Q13562 356 aa20.37■□□□□ 0.85
SMIM12-206ENST00000521580 PTPRKQ15262 1439 aa20.36■□□□□ 0.85
SMIM12-206ENST00000521580 JPH4Q96JJ6 628 aa20.35■□□□□ 0.85
SMIM12-206ENST00000521580 SIN3AQ96ST3 1273 aa20.35■□□□□ 0.85
SMIM12-206ENST00000521580 CEP170Q5SW79 1584 aa20.35■□□□□ 0.85
SMIM12-206ENST00000521580 CHIC2Q9UKJ5 165 aa20.33■□□□□ 0.84
SMIM12-206ENST00000521580 ARHGEF11O15085 1522 aa20.32■□□□□ 0.84
SMIM12-206ENST00000521580 CDK11AQ9UQ88 783 aaPredicted RBP20.32■□□□□ 0.84
SMIM12-206ENST00000521580 PTPN23Q9H3S7 1636 aa20.31■□□□□ 0.84
SMIM12-206ENST00000521580 NUP153P49790 1475 aaKnown RBP20.29■□□□□ 0.84
SMIM12-206ENST00000521580 HFM1A2PYH4 1435 aa20.29■□□□□ 0.84
SMIM12-206ENST00000521580 CARMIL2Q6F5E8 1435 aa20.29■□□□□ 0.84
SMIM12-206ENST00000521580 RRP7BPQ9NSQ0 103 aa20.29■□□□□ 0.84
SMIM12-206ENST00000521580 NUP160Q12769 1436 aa20.29■□□□□ 0.84
SMIM12-206ENST00000521580 MIER1Q8N108 512 aa20.27■□□□□ 0.84
SMIM12-206ENST00000521580 RAPGEF6Q8TEU7 1601 aa20.27■□□□□ 0.83
SMIM12-206ENST00000521580 NAIPQ13075 1403 aa20.26■□□□□ 0.83
SMIM12-206ENST00000521580 PLB1Q6P1J6 1458 aa20.25■□□□□ 0.83
SMIM12-206ENST00000521580 MIA2Q96PC5 1412 aa20.24■□□□□ 0.83
SMIM12-206ENST00000521580 TCOF1Q13428 1488 aaKnown RBP20.23■□□□□ 0.83
SMIM12-206ENST00000521580 UACAQ9BZF9 1416 aa20.2■□□□□ 0.82
SMIM12-206ENST00000521580 PRG4Q92954 1404 aaPredicted RBP20.19■□□□□ 0.82
SMIM12-206ENST00000521580 CENPBP07199 599 aaPredicted RBP20.19■□□□□ 0.82
SMIM12-206ENST00000521580 TRIM52Q96A61 297 aa20.19■□□□□ 0.82
SMIM12-206ENST00000521580 ZNF644Q9H582 1327 aaPredicted RBP20.17■□□□□ 0.82
SMIM12-206ENST00000521580 YTHDC1Q96MU7 727 aaKnown RBP20.17■□□□□ 0.82
SMIM12-206ENST00000521580 TIMELESSQ9UNS1 1208 aa20.16■□□□□ 0.82
SMIM12-206ENST00000521580 TROQ12816 1431 aaPredicted RBP20.16■□□□□ 0.82
SMIM12-206ENST00000521580 ACIN1Q9UKV3 1341 aaKnown RBP20.15■□□□□ 0.82
SMIM12-206ENST00000521580 CFDP1Q9UEE9 299 aaPredicted RBP20.14■□□□□ 0.81
SMIM12-206ENST00000521580 ZNF777Q9ULD5 760 aaPredicted RBP20.13■□□□□ 0.81
SMIM12-206ENST00000521580 TONSLQ96HA7 1378 aa20.12■□□□□ 0.81
SMIM12-206ENST00000521580 PLEKHD1A6NEE1 506 aa20.12■□□□□ 0.81
SMIM12-206ENST00000521580 SCAF1Q9H7N4 1312 aaKnown RBP20.11■□□□□ 0.81
SMIM12-206ENST00000521580 PPP1R15AO75807 674 aaPredicted RBP20.1■□□□□ 0.81
SMIM12-206ENST00000521580 DAPK1P53355 1430 aa20.09■□□□□ 0.81
SMIM12-206ENST00000521580 AKNAQ7Z591 1439 aa20.08■□□□□ 0.81
SMIM12-206ENST00000521580 PTPRGP23470 1445 aa20.07■□□□□ 0.8
SMIM12-206ENST00000521580 ABCC5O15440 1437 aa20.07■□□□□ 0.8
SMIM12-206ENST00000521580 ATP10BO94823 1461 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms