RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 P3H3Q8IVL6 736 aa38.54■■■■□ 3.76
COL13A1-213ENST00000520267 FHAD1B1AJZ9 1412 aa38.53■■■■□ 3.76
COL13A1-213ENST00000520267 EFCAB5A4FU69 1503 aa38.49■■■■□ 3.75
COL13A1-213ENST00000520267 PCF11O94913 1555 aaKnown RBP38.49■■■■□ 3.75
COL13A1-213ENST00000520267 TARBP1Q13395 1621 aaKnown RBP38.48■■■■□ 3.75
COL13A1-213ENST00000520267 FHOD3Q2V2M9 1422 aa38.47■■■■□ 3.75
COL13A1-213ENST00000520267 CCNB3Q8WWL7 1395 aa38.45■■■■□ 3.75
COL13A1-213ENST00000520267 LRRC9Q6ZRR7 1453 aa38.42■■■■□ 3.74
COL13A1-213ENST00000520267 CFAP43Q8NDM7 1665 aa38.42■■■■□ 3.74
COL13A1-213ENST00000520267 FYCO1Q9BQS8 1478 aa38.31■■■■□ 3.72
COL13A1-213ENST00000520267 MRC2Q9UBG0 1479 aa38.31■■■■□ 3.72
COL13A1-213ENST00000520267 AQRO60306 1485 aaKnown RBP eCLIP38.29■■■■□ 3.72
COL13A1-213ENST00000520267 ATP1B4Q9UN42 357 aaPredicted RBP38.28■■■■□ 3.72
COL13A1-213ENST00000520267 CASKIN1Q8WXD9 1431 aa38.28■■■■□ 3.72
COL13A1-213ENST00000520267 DHX57Q6P158 1386 aaKnown RBP38.27■■■■□ 3.72
COL13A1-213ENST00000520267 PBRM1Q86U86 1689 aa38.25■■■■□ 3.71
COL13A1-213ENST00000520267 SAMD9Q5K651 1589 aa38.23■■■■□ 3.71
COL13A1-213ENST00000520267 PHLDB1Q86UU1 1377 aa38.23■■■■□ 3.71
COL13A1-213ENST00000520267 DIEXFQ68CQ4 756 aaKnown RBP38.22■■■■□ 3.71
COL13A1-213ENST00000520267 FMN1Q68DA7 1419 aa38.2■■■■□ 3.7
COL13A1-213ENST00000520267 ITGAEP38570 1179 aa38.19■■■■□ 3.7
COL13A1-213ENST00000520267 ZNF316A6NFI3 1004 aaPredicted RBP38.18■■■■□ 3.7
COL13A1-213ENST00000520267 CLSPNQ9HAW4 1339 aa38.16■■■■□ 3.7
COL13A1-213ENST00000520267 SNAPC4Q5SXM2 1469 aa38.15■■■■□ 3.7
COL13A1-213ENST00000520267 ADAMTS12P58397 1594 aa38.06■■■■□ 3.68
COL13A1-213ENST00000520267 WDR62O43379 1518 aa38.04■■■■□ 3.68
COL13A1-213ENST00000520267 LRRIQ1Q96JM4 1722 aa38.02■■■■□ 3.68
COL13A1-213ENST00000520267 GRIN2BQ13224 1484 aa38■■■■□ 3.67
COL13A1-213ENST00000520267 IFT140Q96RY7 1462 aa38■■■■□ 3.67
COL13A1-213ENST00000520267 FAM50AQ14320 339 aaKnown RBP37.98■■■■□ 3.67
COL13A1-213ENST00000520267 RAB3GAP2Q9H2M9 1393 aa37.97■■■■□ 3.67
COL13A1-213ENST00000520267 ZNF608Q9ULD9 1512 aaPredicted RBP37.97■■■■□ 3.67
COL13A1-213ENST00000520267 IQGAP2Q13576 1575 aa37.91■■■■□ 3.66
COL13A1-213ENST00000520267 SETD5Q9C0A6 1442 aa37.89■■■■□ 3.66
COL13A1-213ENST00000520267 THOC2Q8NI27 1593 aaKnown RBP37.89■■■■□ 3.66
COL13A1-213ENST00000520267 MTUS2Q5JR59 1369 aa37.86■■■■□ 3.65
COL13A1-213ENST00000520267 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.83■■■■□ 3.65
COL13A1-213ENST00000520267 ERCC6Q03468 1493 aa37.8■■■■□ 3.64
COL13A1-213ENST00000520267 FGD6Q6ZV73 1430 aa37.79■■■■□ 3.64
COL13A1-213ENST00000520267 MAPKBP1O60336 1514 aa37.75■■■■□ 3.63
COL13A1-213ENST00000520267 EIF4G3O43432 1585 aaKnown RBP37.75■■■■□ 3.63
COL13A1-213ENST00000520267 EHBP1L1Q8N3D4 1523 aa37.72■■■■□ 3.63
COL13A1-213ENST00000520267 NCOA2Q15596 1464 aa37.72■■■■□ 3.63
COL13A1-213ENST00000520267 SUPT6HQ7KZ85 1726 aaKnown RBP37.71■■■■□ 3.63
COL13A1-213ENST00000520267 UGGT2Q9NYU1 1516 aa37.7■■■■□ 3.63
COL13A1-213ENST00000520267 HECW1Q76N89 1606 aa37.69■■■■□ 3.62
COL13A1-213ENST00000520267 CCDC18Q5T9S5 1454 aa37.68■■■■□ 3.62
COL13A1-213ENST00000520267 MAGI3Q5TCQ9 1506 aa37.67■■■■□ 3.62
COL13A1-213ENST00000520267 MYOM3Q5VTT5 1437 aa37.63■■■■□ 3.61
COL13A1-213ENST00000520267 KIAA0586Q9BVV6 1533 aa37.62■■■■□ 3.61
COL13A1-213ENST00000520267 GRIN2AQ12879 1464 aa37.6■■■■□ 3.61
COL13A1-213ENST00000520267 ARHGEF11O15085 1522 aa37.58■■■■□ 3.61
COL13A1-213ENST00000520267 EPRSP07814 1512 aaKnown RBP37.58■■■■□ 3.61
COL13A1-213ENST00000520267 PTPRKQ15262 1439 aa37.54■■■■□ 3.6
COL13A1-213ENST00000520267 KIAA0556O60303 1618 aa37.53■■■■□ 3.6
COL13A1-213ENST00000520267 DISP1Q96F81 1524 aa37.53■■■■□ 3.6
COL13A1-213ENST00000520267 CDK13Q14004 1512 aaKnown RBP37.52■■■■□ 3.6
COL13A1-213ENST00000520267 MAGI1Q96QZ7 1491 aaPredicted RBP37.5■■■■□ 3.59
COL13A1-213ENST00000520267 PTPN23Q9H3S7 1636 aa37.5■■■■□ 3.59
COL13A1-213ENST00000520267 MIER1Q8N108 512 aa37.49■■■■□ 3.59
COL13A1-213ENST00000520267 SCAF1Q9H7N4 1312 aaKnown RBP37.47■■■■□ 3.59
COL13A1-213ENST00000520267 ACIN1Q9UKV3 1341 aaKnown RBP37.43■■■■□ 3.58
COL13A1-213ENST00000520267 HFM1A2PYH4 1435 aa37.42■■■■□ 3.58
COL13A1-213ENST00000520267 NEUROD1Q13562 356 aa37.41■■■■□ 3.58
COL13A1-213ENST00000520267 ARID3CA6NKF2 412 aa37.41■■■■□ 3.58
COL13A1-213ENST00000520267 SYNJ2O15056 1496 aa37.4■■■■□ 3.58
COL13A1-213ENST00000520267 SIN3AQ96ST3 1273 aa37.4■■■■□ 3.58
COL13A1-213ENST00000520267 CEP170Q5SW79 1584 aa37.39■■■■□ 3.58
COL13A1-213ENST00000520267 CHMP7Q8WUX9 453 aaPredicted RBP37.38■■■■□ 3.57
COL13A1-213ENST00000520267 TCOF1Q13428 1488 aaKnown RBP37.37■■■■□ 3.57
COL13A1-213ENST00000520267 CENPBP07199 599 aaPredicted RBP37.34■■■■□ 3.57
COL13A1-213ENST00000520267 NAIPQ13075 1403 aa37.33■■■■□ 3.57
COL13A1-213ENST00000520267 RAPGEF6Q8TEU7 1601 aa37.32■■■■□ 3.56
COL13A1-213ENST00000520267 NUP153P49790 1475 aaKnown RBP37.3■■■■□ 3.56
COL13A1-213ENST00000520267 FBLN2P98095 1184 aa37.27■■■■□ 3.56
COL13A1-213ENST00000520267 UACAQ9BZF9 1416 aa37.25■■■■□ 3.55
COL13A1-213ENST00000520267 MIA2Q96PC5 1412 aa37.24■■■■□ 3.55
COL13A1-213ENST00000520267 NUP160Q12769 1436 aa37.21■■■■□ 3.55
COL13A1-213ENST00000520267 TIMELESSQ9UNS1 1208 aa37.2■■■■□ 3.55
COL13A1-213ENST00000520267 GCC2Q8IWJ2 1684 aa37.15■■■■□ 3.54
COL13A1-213ENST00000520267 YTHDC1Q96MU7 727 aaKnown RBP37.15■■■■□ 3.54
COL13A1-213ENST00000520267 CHIC2Q9UKJ5 165 aa37.15■■■■□ 3.54
COL13A1-213ENST00000520267 RRP7BPQ9NSQ0 103 aa37.13■■■■□ 3.54
COL13A1-213ENST00000520267 JPH4Q96JJ6 628 aa37.11■■■■□ 3.53
COL13A1-213ENST00000520267 PLB1Q6P1J6 1458 aa37.1■■■■□ 3.53
COL13A1-213ENST00000520267 CARMIL2Q6F5E8 1435 aa37.08■■■■□ 3.53
COL13A1-213ENST00000520267 AKNAQ7Z591 1439 aa37.08■■■■□ 3.53
COL13A1-213ENST00000520267 CDK11AQ9UQ88 783 aaPredicted RBP37.06■■■■□ 3.52
COL13A1-213ENST00000520267 PPP1R15AO75807 674 aaPredicted RBP37.05■■■■□ 3.52
COL13A1-213ENST00000520267 KDM6BO15054 1643 aa37.03■■■■□ 3.52
COL13A1-213ENST00000520267 PRG4Q92954 1404 aaPredicted RBP37.01■■■■□ 3.52
COL13A1-213ENST00000520267 TROQ12816 1431 aaPredicted RBP37■■■■□ 3.51
COL13A1-213ENST00000520267 DAPK1P53355 1430 aa36.97■■■■□ 3.51
COL13A1-213ENST00000520267 DNMT1P26358 1616 aaKnown RBP36.96■■■■□ 3.51
COL13A1-213ENST00000520267 TONSLQ96HA7 1378 aa36.95■■■■□ 3.51
COL13A1-213ENST00000520267 ZNF644Q9H582 1327 aaPredicted RBP36.94■■■■□ 3.5
COL13A1-213ENST00000520267 ABCC5O15440 1437 aa36.92■■■■□ 3.5
COL13A1-213ENST00000520267 GTF3C3Q9Y5Q9 886 aa36.92■■■■□ 3.5
COL13A1-213ENST00000520267 DENND4BO75064 1496 aaPredicted RBP36.91■■■■□ 3.5
COL13A1-213ENST00000520267 ADCY10Q96PN6 1610 aa36.9■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms