RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 RIMBP3Q9UFD9 1639 aa37.58■■■■□ 3.61
SKP1-206ENST00000519321 KIAA0586Q9BVV6 1533 aa37.56■■■■□ 3.6
SKP1-206ENST00000519321 FAM9AQ8IZU1 332 aaPredicted RBP37.51■■■■□ 3.6
SKP1-206ENST00000519321 SHROOM2Q13796 1616 aa37.5■■■■□ 3.59
SKP1-206ENST00000519321 JPH4Q96JJ6 628 aa37.45■■■■□ 3.59
SKP1-206ENST00000519321 IQGAP2Q13576 1575 aa37.37■■■■□ 3.57
SKP1-206ENST00000519321 PRG4Q92954 1404 aaPredicted RBP37.35■■■■□ 3.57
SKP1-206ENST00000519321 KIF21BO75037 1637 aa37.32■■■■□ 3.57
SKP1-206ENST00000519321 ARAP1Q96P48 1450 aa37.32■■■■□ 3.56
SKP1-206ENST00000519321 CTTNBP2Q8WZ74 1663 aa37.31■■■■□ 3.56
SKP1-206ENST00000519321 ERCC6L2Q5T890 1561 aa37.27■■■■□ 3.56
SKP1-206ENST00000519321 CYB5RLQ6IPT4 315 aa37.27■■■■□ 3.56
SKP1-206ENST00000519321 CARMIL2Q6F5E8 1435 aa37.19■■■■□ 3.54
SKP1-206ENST00000519321 UGGT2Q9NYU1 1516 aa37.18■■■■□ 3.54
SKP1-206ENST00000519321 GOLGA3Q08378 1498 aa37.13■■■■□ 3.53
SKP1-206ENST00000519321 DISP1Q96F81 1524 aa37.05■■■■□ 3.52
SKP1-206ENST00000519321 UBTFP17480 764 aaKnown RBP37.01■■■■□ 3.52
SKP1-206ENST00000519321 TNIKQ9UKE5 1360 aa37.01■■■■□ 3.51
SKP1-206ENST00000519321 KIAA0556O60303 1618 aa36.99■■■■□ 3.51
SKP1-206ENST00000519321 PTPRGP23470 1445 aa36.95■■■■□ 3.51
SKP1-206ENST00000519321 EHMT2Q96KQ7 1210 aa36.95■■■■□ 3.51
SKP1-206ENST00000519321 SAMD9Q5K651 1589 aa36.83■■■■□ 3.49
SKP1-206ENST00000519321 TTBK1Q5TCY1 1321 aaPredicted RBP36.83■■■■□ 3.49
SKP1-206ENST00000519321 EFCAB5A4FU69 1503 aa36.77■■■■□ 3.48
SKP1-206ENST00000519321 RANGAP1P46060 587 aaPredicted RBP36.76■■■■□ 3.48
SKP1-206ENST00000519321 P3H3Q8IVL6 736 aa36.72■■■■□ 3.47
SKP1-206ENST00000519321 UACAQ9BZF9 1416 aa36.72■■■■□ 3.47
SKP1-206ENST00000519321 ADCY10Q96PN6 1610 aa36.71■■■■□ 3.47
SKP1-206ENST00000519321 NPM1P06748 294 aaKnown RBP eCLIP36.7■■■■□ 3.47
SKP1-206ENST00000519321 UHRF1BP1LA0JNW5 1464 aa36.69■■■■□ 3.46
SKP1-206ENST00000519321 ABCC2Q92887 1545 aa36.64■■■■□ 3.46
SKP1-206ENST00000519321 FHOD3Q2V2M9 1422 aa36.59■■■■□ 3.45
SKP1-206ENST00000519321 ABCA8O94911 1581 aa36.57■■■■□ 3.45
SKP1-206ENST00000519321 PLB1Q6P1J6 1458 aa36.57■■■■□ 3.45
SKP1-206ENST00000519321 ARHGAP35Q9NRY4 1499 aa36.56■■■■□ 3.44
SKP1-206ENST00000519321 MAPKBP1O60336 1514 aa36.49■■■■□ 3.43
SKP1-206ENST00000519321 KDM5BQ9UGL1 1544 aa36.49■■■■□ 3.43
SKP1-206ENST00000519321 CLIP1P30622 1438 aa36.45■■■■□ 3.43
SKP1-206ENST00000519321 LOC105371045A0A1W2PR82 267 aa36.45■■■■□ 3.43
SKP1-206ENST00000519321 RAPGEF6Q8TEU7 1601 aa36.45■■■■□ 3.42
SKP1-206ENST00000519321 TRHP20396 242 aaPredicted RBP36.44■■■■□ 3.42
SKP1-206ENST00000519321 FMN1Q68DA7 1419 aa36.43■■■■□ 3.42
SKP1-206ENST00000519321 ZCCHC11Q5TAX3 1644 aaKnown RBP36.39■■■■□ 3.42
SKP1-206ENST00000519321 CEP162Q5TB80 1403 aa36.34■■■■□ 3.41
SKP1-206ENST00000519321 ASXL2Q76L83 1435 aa36.31■■■■□ 3.4
SKP1-206ENST00000519321 NUP153P49790 1475 aaKnown RBP36.28■■■■□ 3.4
SKP1-206ENST00000519321 ABCC10Q5T3U5 1492 aa36.28■■■■□ 3.4
SKP1-206ENST00000519321 ATP10BO94823 1461 aa36.27■■■■□ 3.4
SKP1-206ENST00000519321 HECW1Q76N89 1606 aa36.21■■■■□ 3.39
SKP1-206ENST00000519321 DIP2BQ9P265 1576 aa36.2■■■■□ 3.39
SKP1-206ENST00000519321 ARID3CA6NKF2 412 aa36.2■■■■□ 3.39
SKP1-206ENST00000519321 WDR7Q9Y4E6 1490 aa36.19■■■■□ 3.38
SKP1-206ENST00000519321 FAM69CQ0P6D2 419 aa36.19■■■■□ 3.38
SKP1-206ENST00000519321 KIF13AQ9H1H9 1805 aa36.18■■■■□ 3.38
SKP1-206ENST00000519321 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.18■■■■□ 3.38
SKP1-206ENST00000519321 HNRNPUL2Q1KMD3 747 aaKnown RBP36.18■■■■□ 3.38
SKP1-206ENST00000519321 ATP1B4Q9UN42 357 aaPredicted RBP36.15■■■■□ 3.38
SKP1-206ENST00000519321 CASKIN1Q8WXD9 1431 aa36.15■■■■□ 3.38
SKP1-206ENST00000519321 GLI2P10070 1586 aa36.1■■■■□ 3.37
SKP1-206ENST00000519321 EPRSP07814 1512 aaKnown RBP36.1■■■■□ 3.37
SKP1-206ENST00000519321 PCF11O94913 1555 aaKnown RBP36.09■■■■□ 3.37
SKP1-206ENST00000519321 FYCO1Q9BQS8 1478 aa36.08■■■■□ 3.37
SKP1-206ENST00000519321 PLEKHD1A6NEE1 506 aa36.04■■■■□ 3.36
SKP1-206ENST00000519321 CDK13Q14004 1512 aaKnown RBP36.03■■■■□ 3.36
SKP1-206ENST00000519321 CCDC18Q5T9S5 1454 aa36.02■■■■□ 3.36
SKP1-206ENST00000519321 KCNH8Q96L42 1107 aa36.01■■■■□ 3.36
SKP1-206ENST00000519321 CDK11AQ9UQ88 783 aaPredicted RBP36■■■■□ 3.35
SKP1-206ENST00000519321 LRRIQ1Q96JM4 1722 aa35.94■■■■□ 3.34
SKP1-206ENST00000519321 MAP3K4Q9Y6R4 1608 aa35.91■■■■□ 3.34
SKP1-206ENST00000519321 VPS8Q8N3P4 1428 aa35.91■■■■□ 3.34
SKP1-206ENST00000519321 CFAP43Q8NDM7 1665 aa35.89■■■■□ 3.34
SKP1-206ENST00000519321 TSPOAP1O95153 1857 aa35.86■■■■□ 3.33
SKP1-206ENST00000519321 CD109Q6YHK3 1445 aa35.83■■■■□ 3.33
SKP1-206ENST00000519321 ABCA9Q8IUA7 1624 aa35.83■■■■□ 3.33
SKP1-206ENST00000519321 TROQ12816 1431 aaPredicted RBP35.82■■■■□ 3.32
SKP1-206ENST00000519321 TEX14Q8IWB6 1497 aa35.8■■■■□ 3.32
SKP1-206ENST00000519321 PPRC1Q5VV67 1664 aaKnown RBP35.77■■■■□ 3.32
SKP1-206ENST00000519321 MAGI3Q5TCQ9 1506 aa35.77■■■■□ 3.32
SKP1-206ENST00000519321 KIF14Q15058 1648 aa35.72■■■■□ 3.31
SKP1-206ENST00000519321 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.72■■■■□ 3.314e-13■■□□□ 11.5
SKP1-206ENST00000519321 MTUS2Q5JR59 1369 aa35.64■■■■□ 3.3
SKP1-206ENST00000519321 TTC37Q6PGP7 1564 aa35.64■■■■□ 3.3
SKP1-206ENST00000519321 TIAM1Q13009 1591 aa35.61■■■■□ 3.29
SKP1-206ENST00000519321 MAP3K1Q13233 1512 aa35.61■■■■□ 3.29
SKP1-206ENST00000519321 PHLDB1Q86UU1 1377 aa35.59■■■■□ 3.29
SKP1-206ENST00000519321 EHBP1L1Q8N3D4 1523 aa35.58■■■■□ 3.29
SKP1-206ENST00000519321 KDM6BO15054 1643 aa35.58■■■■□ 3.29
SKP1-206ENST00000519321 APLP2Q06481 763 aa35.57■■■■□ 3.28
SKP1-206ENST00000519321 NEO1Q92859 1461 aa35.55■■■■□ 3.28
SKP1-206ENST00000519321 PLCH2O75038 1416 aa35.55■■■■□ 3.28
SKP1-206ENST00000519321 MYO5CQ9NQX4 1742 aa35.54■■■■□ 3.28
SKP1-206ENST00000519321 ARAP3Q8WWN8 1544 aa35.52■■■■□ 3.28
SKP1-206ENST00000519321 CFAP74Q9C0B2 1584 aa35.52■■■■□ 3.28
SKP1-206ENST00000519321 FANCAO15360 1455 aa35.48■■■■□ 3.27
SKP1-206ENST00000519321 LRRC9Q6ZRR7 1453 aa35.47■■■■□ 3.27
SKP1-206ENST00000519321 EFCAB2Q5VUJ9 269 aa35.45■■■■□ 3.27
SKP1-206ENST00000519321 AKNAQ7Z591 1439 aa35.41■■■■□ 3.26
SKP1-206ENST00000519321 SUPT6HQ7KZ85 1726 aaKnown RBP35.41■■■■□ 3.26
SKP1-206ENST00000519321 PREX2Q70Z35 1606 aa35.41■■■■□ 3.26
SKP1-206ENST00000519321 ARHGAP5Q13017 1502 aa35.41■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms