RNA–Protein interactions for RNA: ENST00000519112.5

BRD9-217, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 861 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-217ENST00000519112 JPH4Q96JJ6 628 aa24.15■■□□□ 1.46
BRD9-217ENST00000519112 PRG4Q92954 1404 aaPredicted RBP24.14■■□□□ 1.45
BRD9-217ENST00000519112 CARMIL1Q5VZK9 1371 aa24.06■■□□□ 1.44
BRD9-217ENST00000519112 KIAA0586Q9BVV6 1533 aa24.05■■□□□ 1.44
BRD9-217ENST00000519112 ADCY10Q96PN6 1610 aa23.88■■□□□ 1.41
BRD9-217ENST00000519112 RAPGEF2Q9Y4G8 1499 aa23.87■■□□□ 1.41
BRD9-217ENST00000519112 IQGAP2Q13576 1575 aa23.86■■□□□ 1.41
BRD9-217ENST00000519112 KIF13AQ9H1H9 1805 aa23.86■■□□□ 1.41
BRD9-217ENST00000519112 DISP1Q96F81 1524 aa23.78■■□□□ 1.4
BRD9-217ENST00000519112 PTPRGP23470 1445 aa23.77■■□□□ 1.4
BRD9-217ENST00000519112 CARMIL2Q6F5E8 1435 aa23.76■■□□□ 1.39
BRD9-217ENST00000519112 MAPKBP1O60336 1514 aa23.76■■□□□ 1.39
BRD9-217ENST00000519112 TNIKQ9UKE5 1360 aa23.75■■□□□ 1.39
BRD9-217ENST00000519112 NPM1P06748 294 aaKnown RBP eCLIP23.74■■□□□ 1.39
BRD9-217ENST00000519112 TTBK1Q5TCY1 1321 aaPredicted RBP23.74■■□□□ 1.39
BRD9-217ENST00000519112 UGGT2Q9NYU1 1516 aa23.74■■□□□ 1.39
BRD9-217ENST00000519112 ABCC10Q5T3U5 1492 aa23.72■■□□□ 1.39
BRD9-217ENST00000519112 CTTNBP2Q8WZ74 1663 aa23.71■■□□□ 1.39
BRD9-217ENST00000519112 PRXQ9BXM0 1461 aa23.71■■□□□ 1.39
BRD9-217ENST00000519112 DIP2BQ9P265 1576 aa23.69■■□□□ 1.38
BRD9-217ENST00000519112 KIAA0556O60303 1618 aa23.67■■□□□ 1.38
BRD9-217ENST00000519112 FAM69CQ0P6D2 419 aa23.67■■□□□ 1.38
BRD9-217ENST00000519112 ABCC2Q92887 1545 aa23.64■■□□□ 1.37
BRD9-217ENST00000519112 UHRF1BP1LA0JNW5 1464 aa23.62■■□□□ 1.37
BRD9-217ENST00000519112 UACAQ9BZF9 1416 aa23.61■■□□□ 1.37
BRD9-217ENST00000519112 CSRNP3Q8WYN3 585 aa23.56■■□□□ 1.36
BRD9-217ENST00000519112 TSPOAP1O95153 1857 aa23.55■■□□□ 1.36
BRD9-217ENST00000519112 ASXL2Q76L83 1435 aa23.54■■□□□ 1.36
BRD9-217ENST00000519112 KDM5BQ9UGL1 1544 aa23.53■■□□□ 1.36
BRD9-217ENST00000519112 ZCCHC11Q5TAX3 1644 aaKnown RBP23.51■■□□□ 1.35
BRD9-217ENST00000519112 GOLGA3Q08378 1498 aa23.5■■□□□ 1.35
BRD9-217ENST00000519112 PLB1Q6P1J6 1458 aa23.49■■□□□ 1.35
BRD9-217ENST00000519112 GLI2P10070 1586 aa23.46■■□□□ 1.35
BRD9-217ENST00000519112 EEA1Q15075 1411 aa23.45■■□□□ 1.34
BRD9-217ENST00000519112 ABCA8O94911 1581 aa23.44■■□□□ 1.34
BRD9-217ENST00000519112 PPRC1Q5VV67 1664 aaKnown RBP23.44■■□□□ 1.34
BRD9-217ENST00000519112 FAM9AQ8IZU1 332 aaPredicted RBP23.41■■□□□ 1.34
BRD9-217ENST00000519112 EPRSP07814 1512 aaKnown RBP23.4■■□□□ 1.34
BRD9-217ENST00000519112 KDM6BO15054 1643 aa23.4■■□□□ 1.34
BRD9-217ENST00000519112 SAMD9Q5K651 1589 aa23.39■■□□□ 1.33
BRD9-217ENST00000519112 P3H3Q8IVL6 736 aa23.38■■□□□ 1.33
BRD9-217ENST00000519112 MAP3K4Q9Y6R4 1608 aa23.37■■□□□ 1.33
BRD9-217ENST00000519112 CHIC1Q5VXU3 224 aa23.36■■□□□ 1.33
BRD9-217ENST00000519112 WDR7Q9Y4E6 1490 aa23.33■■□□□ 1.33
BRD9-217ENST00000519112 KIF21BO75037 1637 aa23.32■■□□□ 1.32
BRD9-217ENST00000519112 RANGAP1P46060 587 aaPredicted RBP23.26■■□□□ 1.31
BRD9-217ENST00000519112 AEBP2Q6ZN18 517 aaPredicted RBP23.26■■□□□ 1.31
BRD9-217ENST00000519112 ATP10BO94823 1461 aa23.25■■□□□ 1.31
BRD9-217ENST00000519112 COL17A1Q9UMD9 1497 aaPredicted RBP23.24■■□□□ 1.31
BRD9-217ENST00000519112 ARID3CA6NKF2 412 aa23.24■■□□□ 1.31
BRD9-217ENST00000519112 RAPGEF6Q8TEU7 1601 aa23.22■■□□□ 1.31
BRD9-217ENST00000519112 KCNH8Q96L42 1107 aa23.22■■□□□ 1.31
BRD9-217ENST00000519112 FHOD3Q2V2M9 1422 aa23.21■■□□□ 1.31
BRD9-217ENST00000519112 CFAP43Q8NDM7 1665 aa23.21■■□□□ 1.31
BRD9-217ENST00000519112 TEX14Q8IWB6 1497 aa23.19■■□□□ 1.3
BRD9-217ENST00000519112 CD109Q6YHK3 1445 aa23.16■■□□□ 1.3
BRD9-217ENST00000519112 EHMT2Q96KQ7 1210 aa23.16■■□□□ 1.3
BRD9-217ENST00000519112 MAGI3Q5TCQ9 1506 aa23.15■■□□□ 1.3
BRD9-217ENST00000519112 NUP153P49790 1475 aaKnown RBP23.15■■□□□ 1.3
BRD9-217ENST00000519112 EFCAB5A4FU69 1503 aa23.14■■□□□ 1.3
BRD9-217ENST00000519112 KDM4FA0A1W2PPD8 638 aa23.1■■□□□ 1.29
BRD9-217ENST00000519112 UBTFP17480 764 aaKnown RBP23.09■■□□□ 1.29
BRD9-217ENST00000519112 ABCA9Q8IUA7 1624 aa23.08■■□□□ 1.28
BRD9-217ENST00000519112 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.05■■□□□ 1.28
BRD9-217ENST00000519112 HNRNPUL2Q1KMD3 747 aaKnown RBP23.05■■□□□ 1.28
BRD9-217ENST00000519112 ARHGAP35Q9NRY4 1499 aa23.02■■□□□ 1.28
BRD9-217ENST00000519112 ARAP3Q8WWN8 1544 aa22.97■■□□□ 1.27
BRD9-217ENST00000519112 CDK13Q14004 1512 aaKnown RBP22.95■■□□□ 1.26
BRD9-217ENST00000519112 PLEKHD1A6NEE1 506 aa22.94■■□□□ 1.26
BRD9-217ENST00000519112 ADGRL1O94910 1474 aa22.93■■□□□ 1.26
BRD9-217ENST00000519112 FMN1Q68DA7 1419 aa22.91■■□□□ 1.26
BRD9-217ENST00000519112 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.91■■□□□ 1.26
BRD9-217ENST00000519112 NEO1Q92859 1461 aa22.89■■□□□ 1.25
BRD9-217ENST00000519112 PHLDB1Q86UU1 1377 aa22.89■■□□□ 1.25
BRD9-217ENST00000519112 HECW1Q76N89 1606 aa22.88■■□□□ 1.25
BRD9-217ENST00000519112 TTC37Q6PGP7 1564 aa22.88■■□□□ 1.25
BRD9-217ENST00000519112 LRRIQ1Q96JM4 1722 aa22.88■■□□□ 1.25
BRD9-217ENST00000519112 RAPGEF3O95398 923 aa22.85■■□□□ 1.25
BRD9-217ENST00000519112 ATP1B4Q9UN42 357 aaPredicted RBP22.85■■□□□ 1.25
BRD9-217ENST00000519112 FRMPD1Q5SYB0 1578 aa22.84■■□□□ 1.25
BRD9-217ENST00000519112 FANCAO15360 1455 aa22.79■■□□□ 1.24
BRD9-217ENST00000519112 AKNAQ7Z591 1439 aa22.78■■□□□ 1.24
BRD9-217ENST00000519112 RICTORQ6R327 1708 aa22.77■■□□□ 1.24
BRD9-217ENST00000519112 KIF14Q15058 1648 aa22.76■■□□□ 1.23
BRD9-217ENST00000519112 PCF11O94913 1555 aaKnown RBP22.76■■□□□ 1.23
BRD9-217ENST00000519112 CFAP74Q9C0B2 1584 aa22.76■■□□□ 1.23
BRD9-217ENST00000519112 PLCH2O75038 1416 aa22.74■■□□□ 1.23
BRD9-217ENST00000519112 CASKIN1Q8WXD9 1431 aa22.73■■□□□ 1.23
BRD9-217ENST00000519112 DENND4BO75064 1496 aaPredicted RBP22.73■■□□□ 1.23
BRD9-217ENST00000519112 MYO5CQ9NQX4 1742 aa22.71■■□□□ 1.23
BRD9-217ENST00000519112 CDK11AQ9UQ88 783 aaPredicted RBP22.71■■□□□ 1.23
BRD9-217ENST00000519112 TROQ12816 1431 aaPredicted RBP22.71■■□□□ 1.23
BRD9-217ENST00000519112 CLIP1P30622 1438 aa22.69■■□□□ 1.22
BRD9-217ENST00000519112 ARHGEF40Q8TER5 1519 aa22.65■■□□□ 1.22
BRD9-217ENST00000519112 CCDC18Q5T9S5 1454 aa22.65■■□□□ 1.22
BRD9-217ENST00000519112 ADAMTSL3P82987 1691 aa22.65■■□□□ 1.22
BRD9-217ENST00000519112 ZMYM4Q5VZL5 1548 aa22.64■■□□□ 1.21
BRD9-217ENST00000519112 SCAPERQ9BY12 1400 aa22.64■■□□□ 1.21
BRD9-217ENST00000519112 FYCO1Q9BQS8 1478 aa22.63■■□□□ 1.21
BRD9-217ENST00000519112 BCORL1Q5H9F3 1711 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms