RNA–Protein interactions for RNA: ENST00000518928.1

TSNARE1-203, Transcript of t-SNARE domain containing 1, humanhuman

TSL 3

Gene TSNARE1, Length 940 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-203ENST00000518928 JPH4Q96JJ6 628 aa24.55■■□□□ 1.52
TSNARE1-203ENST00000518928 CUL7Q14999 1698 aa24.53■■□□□ 1.52
TSNARE1-203ENST00000518928 CARMIL1Q5VZK9 1371 aa24.47■■□□□ 1.51
TSNARE1-203ENST00000518928 KIAA0586Q9BVV6 1533 aa24.45■■□□□ 1.5
TSNARE1-203ENST00000518928 ADCY10Q96PN6 1610 aa24.33■■□□□ 1.49
TSNARE1-203ENST00000518928 IQGAP2Q13576 1575 aa24.27■■□□□ 1.48
TSNARE1-203ENST00000518928 TTBK1Q5TCY1 1321 aaPredicted RBP24.27■■□□□ 1.48
TSNARE1-203ENST00000518928 KIF13AQ9H1H9 1805 aa24.26■■□□□ 1.47
TSNARE1-203ENST00000518928 RAPGEF2Q9Y4G8 1499 aa24.26■■□□□ 1.47
TSNARE1-203ENST00000518928 DISP1Q96F81 1524 aa24.21■■□□□ 1.47
TSNARE1-203ENST00000518928 PTPRGP23470 1445 aa24.18■■□□□ 1.46
TSNARE1-203ENST00000518928 MAPKBP1O60336 1514 aa24.15■■□□□ 1.46
TSNARE1-203ENST00000518928 TNIKQ9UKE5 1360 aa24.15■■□□□ 1.46
TSNARE1-203ENST00000518928 ABCC10Q5T3U5 1492 aa24.13■■□□□ 1.45
TSNARE1-203ENST00000518928 UGGT2Q9NYU1 1516 aa24.13■■□□□ 1.45
TSNARE1-203ENST00000518928 DIP2BQ9P265 1576 aa24.12■■□□□ 1.45
TSNARE1-203ENST00000518928 CARMIL2Q6F5E8 1435 aa24.12■■□□□ 1.45
TSNARE1-203ENST00000518928 PRXQ9BXM0 1461 aa24.12■■□□□ 1.45
TSNARE1-203ENST00000518928 FAM69CQ0P6D2 419 aa24.11■■□□□ 1.45
TSNARE1-203ENST00000518928 NPM1P06748 294 aaKnown RBP eCLIP24.09■■□□□ 1.45
TSNARE1-203ENST00000518928 KIAA0556O60303 1618 aa24.09■■□□□ 1.45
TSNARE1-203ENST00000518928 CTTNBP2Q8WZ74 1663 aa24.06■■□□□ 1.44
TSNARE1-203ENST00000518928 ABCC2Q92887 1545 aa24.05■■□□□ 1.44
TSNARE1-203ENST00000518928 UACAQ9BZF9 1416 aa24.01■■□□□ 1.43
TSNARE1-203ENST00000518928 UHRF1BP1LA0JNW5 1464 aa24■■□□□ 1.43
TSNARE1-203ENST00000518928 ASXL2Q76L83 1435 aa23.98■■□□□ 1.43
TSNARE1-203ENST00000518928 TSPOAP1O95153 1857 aa23.96■■□□□ 1.43
TSNARE1-203ENST00000518928 PLB1Q6P1J6 1458 aa23.95■■□□□ 1.42
TSNARE1-203ENST00000518928 KDM5BQ9UGL1 1544 aa23.93■■□□□ 1.42
TSNARE1-203ENST00000518928 CSRNP3Q8WYN3 585 aa23.92■■□□□ 1.42
TSNARE1-203ENST00000518928 ZCCHC11Q5TAX3 1644 aaKnown RBP23.92■■□□□ 1.42
TSNARE1-203ENST00000518928 FAM9AQ8IZU1 332 aaPredicted RBP23.89■■□□□ 1.41
TSNARE1-203ENST00000518928 PPRC1Q5VV67 1664 aaKnown RBP23.87■■□□□ 1.41
TSNARE1-203ENST00000518928 P3H3Q8IVL6 736 aa23.86■■□□□ 1.41
TSNARE1-203ENST00000518928 ABCA8O94911 1581 aa23.86■■□□□ 1.41
TSNARE1-203ENST00000518928 GOLGA3Q08378 1498 aa23.84■■□□□ 1.41
TSNARE1-203ENST00000518928 EPRSP07814 1512 aaKnown RBP23.84■■□□□ 1.41
TSNARE1-203ENST00000518928 GLI2P10070 1586 aa23.82■■□□□ 1.4
TSNARE1-203ENST00000518928 KDM6BO15054 1643 aa23.81■■□□□ 1.4
TSNARE1-203ENST00000518928 ARID3CA6NKF2 412 aa23.77■■□□□ 1.4
TSNARE1-203ENST00000518928 CHIC1Q5VXU3 224 aa23.77■■□□□ 1.4
TSNARE1-203ENST00000518928 SAMD9Q5K651 1589 aa23.77■■□□□ 1.4
TSNARE1-203ENST00000518928 EEA1Q15075 1411 aa23.76■■□□□ 1.39
TSNARE1-203ENST00000518928 RANGAP1P46060 587 aaPredicted RBP23.76■■□□□ 1.39
TSNARE1-203ENST00000518928 MAP3K4Q9Y6R4 1608 aa23.75■■□□□ 1.39
TSNARE1-203ENST00000518928 WDR7Q9Y4E6 1490 aa23.75■■□□□ 1.39
TSNARE1-203ENST00000518928 COL17A1Q9UMD9 1497 aaPredicted RBP23.74■■□□□ 1.39
TSNARE1-203ENST00000518928 EHMT2Q96KQ7 1210 aa23.71■■□□□ 1.39
TSNARE1-203ENST00000518928 AEBP2Q6ZN18 517 aaPredicted RBP23.69■■□□□ 1.38
TSNARE1-203ENST00000518928 KIF21BO75037 1637 aa23.67■■□□□ 1.38
TSNARE1-203ENST00000518928 ATP10BO94823 1461 aa23.67■■□□□ 1.38
TSNARE1-203ENST00000518928 FHOD3Q2V2M9 1422 aa23.67■■□□□ 1.38
TSNARE1-203ENST00000518928 KCNH8Q96L42 1107 aa23.66■■□□□ 1.38
TSNARE1-203ENST00000518928 RAPGEF6Q8TEU7 1601 aa23.62■■□□□ 1.37
TSNARE1-203ENST00000518928 NUP153P49790 1475 aaKnown RBP23.58■■□□□ 1.37
TSNARE1-203ENST00000518928 KDM4FA0A1W2PPD8 638 aa23.57■■□□□ 1.36
TSNARE1-203ENST00000518928 CD109Q6YHK3 1445 aa23.57■■□□□ 1.36
TSNARE1-203ENST00000518928 CFAP43Q8NDM7 1665 aa23.55■■□□□ 1.36
TSNARE1-203ENST00000518928 TEX14Q8IWB6 1497 aa23.55■■□□□ 1.36
TSNARE1-203ENST00000518928 MAGI3Q5TCQ9 1506 aa23.53■■□□□ 1.36
TSNARE1-203ENST00000518928 EFCAB5A4FU69 1503 aa23.48■■□□□ 1.35
TSNARE1-203ENST00000518928 UBTFP17480 764 aaKnown RBP23.46■■□□□ 1.35
TSNARE1-203ENST00000518928 ABCA9Q8IUA7 1624 aa23.46■■□□□ 1.35
TSNARE1-203ENST00000518928 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.45■■□□□ 1.34
TSNARE1-203ENST00000518928 HNRNPUL2Q1KMD3 747 aaKnown RBP23.45■■□□□ 1.34
TSNARE1-203ENST00000518928 ARHGAP35Q9NRY4 1499 aa23.43■■□□□ 1.34
TSNARE1-203ENST00000518928 CDK13Q14004 1512 aaKnown RBP23.42■■□□□ 1.34
TSNARE1-203ENST00000518928 ADGRL1O94910 1474 aa23.4■■□□□ 1.34
TSNARE1-203ENST00000518928 ARAP3Q8WWN8 1544 aa23.33■■□□□ 1.33
TSNARE1-203ENST00000518928 TTC37Q6PGP7 1564 aa23.32■■□□□ 1.32
TSNARE1-203ENST00000518928 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.31■■□□□ 1.32
TSNARE1-203ENST00000518928 RAPGEF3O95398 923 aa23.3■■□□□ 1.32
TSNARE1-203ENST00000518928 FRMPD1Q5SYB0 1578 aa23.3■■□□□ 1.32
TSNARE1-203ENST00000518928 PLEKHD1A6NEE1 506 aa23.28■■□□□ 1.32
TSNARE1-203ENST00000518928 LRRIQ1Q96JM4 1722 aa23.28■■□□□ 1.32
TSNARE1-203ENST00000518928 ATP1B4Q9UN42 357 aaPredicted RBP23.27■■□□□ 1.32
TSNARE1-203ENST00000518928 NEO1Q92859 1461 aa23.25■■□□□ 1.31
TSNARE1-203ENST00000518928 HECW1Q76N89 1606 aa23.25■■□□□ 1.31
TSNARE1-203ENST00000518928 FMN1Q68DA7 1419 aa23.25■■□□□ 1.31
TSNARE1-203ENST00000518928 KIF14Q15058 1648 aa23.19■■□□□ 1.3
TSNARE1-203ENST00000518928 PCF11O94913 1555 aaKnown RBP23.18■■□□□ 1.3
TSNARE1-203ENST00000518928 FANCAO15360 1455 aa23.18■■□□□ 1.3
TSNARE1-203ENST00000518928 AKNAQ7Z591 1439 aa23.17■■□□□ 1.3
TSNARE1-203ENST00000518928 PHLDB1Q86UU1 1377 aa23.17■■□□□ 1.3
TSNARE1-203ENST00000518928 RICTORQ6R327 1708 aa23.15■■□□□ 1.3
TSNARE1-203ENST00000518928 DENND4BO75064 1496 aaPredicted RBP23.11■■□□□ 1.29
TSNARE1-203ENST00000518928 PLCH2O75038 1416 aa23.1■■□□□ 1.29
TSNARE1-203ENST00000518928 TROQ12816 1431 aaPredicted RBP23.09■■□□□ 1.29
TSNARE1-203ENST00000518928 SIGLEC1Q9BZZ2 1709 aa23.09■■□□□ 1.29
TSNARE1-203ENST00000518928 CLIP1P30622 1438 aa23.08■■□□□ 1.29
TSNARE1-203ENST00000518928 CASKIN1Q8WXD9 1431 aa23.08■■□□□ 1.29
TSNARE1-203ENST00000518928 YEATS2Q9ULM3 1422 aa23.08■■□□□ 1.28
TSNARE1-203ENST00000518928 CFAP74Q9C0B2 1584 aa23.07■■□□□ 1.28
TSNARE1-203ENST00000518928 ARHGEF40Q8TER5 1519 aa23.07■■□□□ 1.28
TSNARE1-203ENST00000518928 MYO5CQ9NQX4 1742 aa23.05■■□□□ 1.28
TSNARE1-203ENST00000518928 ADAMTSL3P82987 1691 aa23.04■■□□□ 1.28
TSNARE1-203ENST00000518928 SCAPERQ9BY12 1400 aa23.04■■□□□ 1.28
TSNARE1-203ENST00000518928 ZMYM4Q5VZL5 1548 aa23.03■■□□□ 1.28
TSNARE1-203ENST00000518928 HECW2Q9P2P5 1572 aa23.02■■□□□ 1.28
TSNARE1-203ENST00000518928 POGZQ7Z3K3 1410 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms