RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	KIAA0586	Q9BVV6	1533 aa		41.05	■■■■■ 4.16
CNOT7-204	ENST00000518885	PRG4	Q92954	1404 aa	Predicted RBP	41.05	■■■■■ 4.16
CNOT7-204	ENST00000518885	ERCC6L2	Q5T890	1561 aa		41.04	■■■■■ 4.16
CNOT7-204	ENST00000518885	TRH	P20396	242 aa	Predicted RBP	40.89	■■■■■ 4.14
CNOT7-204	ENST00000518885	RAPGEF2	Q9Y4G8	1499 aa		40.89	■■■■■ 4.14
CNOT7-204	ENST00000518885	IQGAP2	Q13576	1575 aa		40.76	■■■■■ 4.12
CNOT7-204	ENST00000518885	CARMIL2	Q6F5E8	1435 aa		40.72	■■■■■ 4.11
CNOT7-204	ENST00000518885	PRX	Q9BXM0	1461 aa		40.58	■■■■■ 4.09
CNOT7-204	ENST00000518885	EEA1	Q15075	1411 aa		40.58	■■■■■ 4.09
CNOT7-204	ENST00000518885	NPM1	P06748	294 aa	Known RBP eCLIP	40.57	■■■■■ 4.09
CNOT7-204	ENST00000518885	TNIK	Q9UKE5	1360 aa		40.55	■■■■■ 4.08
CNOT7-204	ENST00000518885	PTPRG	P23470	1445 aa		40.54	■■■■■ 4.08
CNOT7-204	ENST00000518885	CSRNP3	Q8WYN3	585 aa		40.51	■■■■■ 4.08
CNOT7-204	ENST00000518885	UGGT2	Q9NYU1	1516 aa		40.51	■■■■■ 4.08
CNOT7-204	ENST00000518885	CTTNBP2	Q8WZ74	1663 aa		40.48	■■■■■ 4.07
CNOT7-204	ENST00000518885	DISP1	Q96F81	1524 aa		40.42	■■■■■ 4.06
CNOT7-204	ENST00000518885	ADCY10	Q96PN6	1610 aa		40.42	■■■■■ 4.06
CNOT7-204	ENST00000518885	TTBK1	Q5TCY1	1321 aa	Predicted RBP	40.39	■■■■■ 4.06
CNOT7-204	ENST00000518885	GOLGA3	Q08378	1498 aa		40.37	■■■■■ 4.05
CNOT7-204	ENST00000518885	KIAA0556	O60303	1618 aa		40.34	■■■■■ 4.05
CNOT7-204	ENST00000518885	MAPKBP1	O60336	1514 aa		40.33	■■■■■ 4.05
CNOT7-204	ENST00000518885	CHIC1	Q5VXU3	224 aa		40.29	■■■■■ 4.04
CNOT7-204	ENST00000518885	UACA	Q9BZF9	1416 aa		40.25	■■■■■ 4.03
CNOT7-204	ENST00000518885	UHRF1BP1L	A0JNW5	1464 aa		40.24	■■■■■ 4.03
CNOT7-204	ENST00000518885	ABCC2	Q92887	1545 aa		40.22	■■■■■ 4.03
CNOT7-204	ENST00000518885	FAM9A	Q8IZU1	332 aa	Predicted RBP	40.2	■■■■■ 4.03
CNOT7-204	ENST00000518885	ABCC10	Q5T3U5	1492 aa		40.18	■■■■■ 4.02
CNOT7-204	ENST00000518885	KIF13A	Q9H1H9	1805 aa		40.12	■■■■■ 4.01
CNOT7-204	ENST00000518885	FAM69C	Q0P6D2	419 aa		40.12	■■■■■ 4.01
CNOT7-204	ENST00000518885	KIF21B	O75037	1637 aa		40.08	■■■■■ 4.01
CNOT7-204	ENST00000518885	DIP2B	Q9P265	1576 aa		40.06	■■■■■ 4
CNOT7-204	ENST00000518885	PLB1	Q6P1J6	1458 aa		40.04	■■■■■ 4
CNOT7-204	ENST00000518885	KDM5B	Q9UGL1	1544 aa		40.01	■■■■■ 4
CNOT7-204	ENST00000518885	ASXL2	Q76L83	1435 aa		39.98	■■■■□ 3.99
CNOT7-204	ENST00000518885	SAMD9	Q5K651	1589 aa		39.93	■■■■□ 3.98
CNOT7-204	ENST00000518885	ZCCHC11	Q5TAX3	1644 aa	Known RBP	39.91	■■■■□ 3.98
CNOT7-204	ENST00000518885	ABCA8	O94911	1581 aa		39.9	■■■■□ 3.98
CNOT7-204	ENST00000518885	P3H3	Q8IVL6	736 aa		39.88	■■■■□ 3.97
CNOT7-204	ENST00000518885	GLI2	P10070	1586 aa		39.82	■■■■□ 3.97
CNOT7-204	ENST00000518885	UBTF	P17480	764 aa	Known RBP	39.8	■■■■□ 3.96
CNOT7-204	ENST00000518885	RANGAP1	P46060	587 aa	Predicted RBP	39.79	■■■■□ 3.96
CNOT7-204	ENST00000518885	EFCAB5	A4FU69	1503 aa		39.78	■■■■□ 3.96
CNOT7-204	ENST00000518885	WDR7	Q9Y4E6	1490 aa		39.75	■■■■□ 3.95
CNOT7-204	ENST00000518885	EPRS	P07814	1512 aa	Known RBP	39.74	■■■■□ 3.95
CNOT7-204	ENST00000518885	TSPOAP1	O95153	1857 aa		39.68	■■■■□ 3.94
CNOT7-204	ENST00000518885	EHMT2	Q96KQ7	1210 aa		39.66	■■■■□ 3.94
CNOT7-204	ENST00000518885	FHOD3	Q2V2M9	1422 aa		39.65	■■■■□ 3.94
CNOT7-204	ENST00000518885	RAPGEF6	Q8TEU7	1601 aa		39.65	■■■■□ 3.94
CNOT7-204	ENST00000518885	KDM6B	O15054	1643 aa		39.58	■■■■□ 3.93
CNOT7-204	ENST00000518885	MAP3K4	Q9Y6R4	1608 aa		39.58	■■■■□ 3.93
CNOT7-204	ENST00000518885	TEX14	Q8IWB6	1497 aa		39.57	■■■■□ 3.93
CNOT7-204	ENST00000518885	ATP10B	O94823	1461 aa		39.56	■■■■□ 3.92
CNOT7-204	ENST00000518885	ARID3C	A6NKF2	412 aa		39.52	■■■■□ 3.92
CNOT7-204	ENST00000518885	KCNH8	Q96L42	1107 aa		39.52	■■■■□ 3.92
CNOT7-204	ENST00000518885	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	39.5	■■■■□ 3.91
CNOT7-204	ENST00000518885	HNRNPUL2	Q1KMD3	747 aa	Known RBP	39.5	■■■■□ 3.91
CNOT7-204	ENST00000518885	PPRC1	Q5VV67	1664 aa	Known RBP	39.48	■■■■□ 3.91
CNOT7-204	ENST00000518885	NUP153	P49790	1475 aa	Known RBP	39.47	■■■■□ 3.91
CNOT7-204	ENST00000518885	CFAP43	Q8NDM7	1665 aa		39.46	■■■■□ 3.91
CNOT7-204	ENST00000518885	FMN1	Q68DA7	1419 aa		39.44	■■■■□ 3.9
CNOT7-204	ENST00000518885	CD109	Q6YHK3	1445 aa		39.43	■■■■□ 3.9
CNOT7-204	ENST00000518885	ARHGAP35	Q9NRY4	1499 aa		39.39	■■■■□ 3.9
CNOT7-204	ENST00000518885	MAGI3	Q5TCQ9	1506 aa		39.37	■■■■□ 3.89
CNOT7-204	ENST00000518885	PLEKHD1	A6NEE1	506 aa		39.32	■■■■□ 3.89
CNOT7-204	ENST00000518885	HECW1	Q76N89	1606 aa		39.26	■■■■□ 3.88
CNOT7-204	ENST00000518885	ABCA9	Q8IUA7	1624 aa		39.26	■■■■□ 3.88
CNOT7-204	ENST00000518885	ATP1B4	Q9UN42	357 aa	Predicted RBP	39.22	■■■■□ 3.87
CNOT7-204	ENST00000518885	AEBP2	Q6ZN18	517 aa	Predicted RBP	39.2	■■■■□ 3.87
CNOT7-204	ENST00000518885	CDK11A	Q9UQ88	783 aa	Predicted RBP	39.16	■■■■□ 3.86
CNOT7-204	ENST00000518885	PHLDB1	Q86UU1	1377 aa		39.16	■■■■□ 3.86
CNOT7-204	ENST00000518885	CDK13	Q14004	1512 aa	Known RBP	39.13	■■■■□ 3.85
CNOT7-204	ENST00000518885	COL17A1	Q9UMD9	1497 aa	Predicted RBP	39.12	■■■■□ 3.85
CNOT7-204	ENST00000518885	CLIP1	P30622	1438 aa		39.1	■■■■□ 3.85
CNOT7-204	ENST00000518885	NEO1	Q92859	1461 aa		39.05	■■■■□ 3.84
CNOT7-204	ENST00000518885	ARAP3	Q8WWN8	1544 aa		39.04	■■■■□ 3.84
CNOT7-204	ENST00000518885	CASKIN1	Q8WXD9	1431 aa		39.02	■■■■□ 3.84
CNOT7-204	ENST00000518885	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	38.98	■■■■□ 3.83
CNOT7-204	ENST00000518885	CCDC18	Q5T9S5	1454 aa		38.98	■■■■□ 3.83
CNOT7-204	ENST00000518885	CFAP74	Q9C0B2	1584 aa		38.95	■■■■□ 3.83
CNOT7-204	ENST00000518885	PCF11	O94913	1555 aa	Known RBP	38.94	■■■■□ 3.82
CNOT7-204	ENST00000518885	FYCO1	Q9BQS8	1478 aa		38.93	■■■■□ 3.82
CNOT7-204	ENST00000518885	TTC37	Q6PGP7	1564 aa		38.9	■■■■□ 3.82
CNOT7-204	ENST00000518885	TRO	Q12816	1431 aa	Predicted RBP	38.89	■■■■□ 3.82
CNOT7-204	ENST00000518885	FANCA	O15360	1455 aa		38.87	■■■■□ 3.81
CNOT7-204	ENST00000518885	KIF14	Q15058	1648 aa		38.87	■■■■□ 3.81
CNOT7-204	ENST00000518885	LRRIQ1	Q96JM4	1722 aa		38.81	■■■■□ 3.8
CNOT7-204	ENST00000518885	PLCH2	O75038	1416 aa		38.8	■■■■□ 3.8
CNOT7-204	ENST00000518885	CEP162	Q5TB80	1403 aa		38.8	■■■■□ 3.8
CNOT7-204	ENST00000518885	AKNA	Q7Z591	1439 aa		38.8	■■■■□ 3.8
CNOT7-204	ENST00000518885	DENND4B	O75064	1496 aa	Predicted RBP	38.76	■■■■□ 3.8
CNOT7-204	ENST00000518885	KDM4F	A0A1W2PPD8	638 aa		38.75	■■■■□ 3.79
CNOT7-204	ENST00000518885	RAPGEF3	O95398	923 aa		38.75	■■■■□ 3.79
CNOT7-204	ENST00000518885	MYO5C	Q9NQX4	1742 aa		38.75	■■■■□ 3.79
CNOT7-204	ENST00000518885	EFCAB2	Q5VUJ9	269 aa		38.72	■■■■□ 3.79
CNOT7-204	ENST00000518885	ADGRL1	O94910	1474 aa		38.7	■■■■□ 3.79
CNOT7-204	ENST00000518885	FRMPD1	Q5SYB0	1578 aa		38.65	■■■■□ 3.78
CNOT7-204	ENST00000518885	ARHGAP5	Q13017	1502 aa		38.62	■■■■□ 3.77
CNOT7-204	ENST00000518885	RICTOR	Q6R327	1708 aa		38.6	■■■■□ 3.77
CNOT7-204	ENST00000518885	LOC105371045	A0A1W2PR82	267 aa		38.59	■■■■□ 3.77
CNOT7-204	ENST00000518885	SCAPER	Q9BY12	1400 aa		38.58	■■■■□ 3.77

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms