RNA–Protein interactions for RNA: ENST00000518855.5

CLINT1-202, Transcript of clathrin interactor 1, humanhuman

TSL 2

Gene CLINT1, Length 3,394 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-202ENST00000518855 KIF21BO75037 1637 aa8.03□□□□□ -1.12
CLINT1-202ENST00000518855 EVX2Q03828 476 aa8.01□□□□□ -1.13
CLINT1-202ENST00000518855 PRKAR2AP13861 404 aaKnown RBP8□□□□□ -1.13
CLINT1-202ENST00000518855 DCAF8L2P0C7V8 631 aa7.99□□□□□ -1.13
CLINT1-202ENST00000518855 CHADLQ6NUI6 762 aa7.99□□□□□ -1.13
CLINT1-202ENST00000518855 TNIKQ9UKE5 1360 aa7.99□□□□□ -1.13
CLINT1-202ENST00000518855 HAX1O00165 279 aa7.99□□□□□ -1.13
CLINT1-202ENST00000518855 CCDC88BA6NC98 1476 aa7.96□□□□□ -1.13
CLINT1-202ENST00000518855 MYT1Q01538 1121 aa7.95□□□□□ -1.14
CLINT1-202ENST00000518855 SPDYE4A6NLX3 237 aa7.95□□□□□ -1.14
CLINT1-202ENST00000518855 BAZ1BQ9UIG0 1483 aaKnown RBP7.95□□□□□ -1.14
CLINT1-202ENST00000518855 SP7Q8TDD2 431 aaPredicted RBP7.94□□□□□ -1.14
CLINT1-202ENST00000518855 PRR29P0C7W0 189 aa7.94□□□□□ -1.14
CLINT1-202ENST00000518855 CEP162Q5TB80 1403 aa7.93□□□□□ -1.14
CLINT1-202ENST00000518855 ABCC8Q09428 1581 aa7.91□□□□□ -1.14
CLINT1-202ENST00000518855 GOLGA3Q08378 1498 aa7.91□□□□□ -1.14
CLINT1-202ENST00000518855 BIVM-ERCC5R4GMW8 1640 aa7.91□□□□□ -1.14
CLINT1-202ENST00000518855 BICRAQ9NZM4 1560 aa7.9□□□□□ -1.14
CLINT1-202ENST00000518855 SLC24A1O60721 1099 aa7.9□□□□□ -1.14
CLINT1-202ENST00000518855 ACIN1Q9UKV3 1341 aaKnown RBP7.89□□□□□ -1.15
CLINT1-202ENST00000518855 CEP164Q9UPV0 1460 aa7.87□□□□□ -1.15
CLINT1-202ENST00000518855 ERICH3Q5RHP9 1530 aa7.86□□□□□ -1.15
CLINT1-202ENST00000518855 SYNJ1O43426 1573 aa7.86□□□□□ -1.15
CLINT1-202ENST00000518855 TOP2BQ02880 1626 aa7.85□□□□□ -1.15
CLINT1-202ENST00000518855 PRDM2Q13029 1718 aa7.85□□□□□ -1.15
CLINT1-202ENST00000518855 CUX2O14529 1486 aa7.84□□□□□ -1.15
CLINT1-202ENST00000518855 SOGA1O94964 1423 aa7.82□□□□□ -1.16
CLINT1-202ENST00000518855 C19orf67A6NJJ6 358 aa7.82□□□□□ -1.16
CLINT1-202ENST00000518855 FARP1Q9Y4F1 1045 aaPredicted RBP7.81□□□□□ -1.16
CLINT1-202ENST00000518855 CLSPNQ9HAW4 1339 aa7.81□□□□□ -1.16
CLINT1-202ENST00000518855 VPS8Q8N3P4 1428 aa7.8□□□□□ -1.16
CLINT1-202ENST00000518855 CREBZFQ9NS37 354 aa7.79□□□□□ -1.16
CLINT1-202ENST00000518855 RUSC2Q8N2Y8 1516 aa7.78□□□□□ -1.16
CLINT1-202ENST00000518855 PRKCSHP14314 528 aaPredicted RBP7.78□□□□□ -1.16
CLINT1-202ENST00000518855 CENPBP07199 599 aaPredicted RBP7.77□□□□□ -1.16
CLINT1-202ENST00000518855 NEUROD1Q13562 356 aa7.77□□□□□ -1.16
CLINT1-202ENST00000518855 DIEXFQ68CQ4 756 aaKnown RBP7.76□□□□□ -1.17
CLINT1-202ENST00000518855 HMGXB3Q12766 1538 aa7.76□□□□□ -1.17
CLINT1-202ENST00000518855 MAP3K1Q13233 1512 aa7.76□□□□□ -1.17
CLINT1-202ENST00000518855 PROM2Q8N271 834 aa7.76□□□□□ -1.17
CLINT1-202ENST00000518855 CLIP1P30622 1438 aa7.75□□□□□ -1.17
CLINT1-202ENST00000518855 PRXQ9BXM0 1461 aa7.75□□□□□ -1.17
CLINT1-202ENST00000518855 ZNF316A6NFI3 1004 aaPredicted RBP7.74□□□□□ -1.17
CLINT1-202ENST00000518855 CD44P16070 742 aaKnown RBP7.74□□□□□ -1.17
CLINT1-202ENST00000518855 STAG3Q9UJ98 1225 aa7.74□□□□□ -1.17
CLINT1-202ENST00000518855 ATAD2BQ9ULI0 1458 aa7.74□□□□□ -1.17
CLINT1-202ENST00000518855 CCER1Q8TC90 406 aaPredicted RBP7.74□□□□□ -1.17
CLINT1-202ENST00000518855 RRBP1Q9P2E9 1410 aaKnown RBP7.73□□□□□ -1.17
CLINT1-202ENST00000518855 FAM9AQ8IZU1 332 aaPredicted RBP7.73□□□□□ -1.17
CLINT1-202ENST00000518855 GABBR2O75899 941 aa7.72□□□□□ -1.17
CLINT1-202ENST00000518855 TTBK1Q5TCY1 1321 aaPredicted RBP7.72□□□□□ -1.17
CLINT1-202ENST00000518855 MNX1P50219 401 aaPredicted RBP7.71□□□□□ -1.18
CLINT1-202ENST00000518855 ARAP1Q96P48 1450 aa7.7□□□□□ -1.18
CLINT1-202ENST00000518855 RAPGEF2Q9Y4G8 1499 aa7.69□□□□□ -1.18
CLINT1-202ENST00000518855 CFAP43Q8NDM7 1665 aa7.69□□□□□ -1.18
CLINT1-202ENST00000518855 FKBP8Q14318 412 aa7.68□□□□□ -1.18
CLINT1-202ENST00000518855 GTF3C3Q9Y5Q9 886 aa7.68□□□□□ -1.18
CLINT1-202ENST00000518855 DHX57Q6P158 1386 aaKnown RBP7.64□□□□□ -1.19
CLINT1-202ENST00000518855 ZRANB1Q9UGI0 708 aa7.64□□□□□ -1.19
CLINT1-202ENST00000518855 NCAPD3P42695 1498 aa7.63□□□□□ -1.19
CLINT1-202ENST00000518855 CUX1P39880 1505 aa7.62□□□□□ -1.19
CLINT1-202ENST00000518855 POTEIP0CG38 1075 aa7.62□□□□□ -1.19
CLINT1-202ENST00000518855 TIAM1Q13009 1591 aa7.61□□□□□ -1.19
CLINT1-202ENST00000518855 MAPKBP1O60336 1514 aa7.6□□□□□ -1.19
CLINT1-202ENST00000518855 CFTRP13569 1480 aa7.6□□□□□ -1.19
CLINT1-202ENST00000518855 PHF12Q96QT6 1004 aa7.59□□□□□ -1.19
CLINT1-202ENST00000518855 GALR2O43603 387 aaPredicted RBP7.59□□□□□ -1.2
CLINT1-202ENST00000518855 ZNF579Q8NAF0 562 aaKnown RBP7.59□□□□□ -1.2
CLINT1-202ENST00000518855 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.58□□□□□ -1.2
CLINT1-202ENST00000518855 ARHGAP35Q9NRY4 1499 aa7.58□□□□□ -1.2
CLINT1-202ENST00000518855 MIER1Q8N108 512 aa7.57□□□□□ -1.2
CLINT1-202ENST00000518855 KIF21AQ7Z4S6 1674 aa7.57□□□□□ -1.2
CLINT1-202ENST00000518855 AQRO60306 1485 aaKnown RBP eCLIP7.56□□□□□ -1.23e-6■■■■■ 30.9
CLINT1-202ENST00000518855 CC2D2AQ9P2K1 1620 aa7.55□□□□□ -1.2
CLINT1-202ENST00000518855 KIF27Q86VH2 1401 aa7.55□□□□□ -1.2
CLINT1-202ENST00000518855 CTTNBP2Q8WZ74 1663 aa7.55□□□□□ -1.2
CLINT1-202ENST00000518855 EFCAB5A4FU69 1503 aa7.55□□□□□ -1.2
CLINT1-202ENST00000518855 NPM1P06748 294 aaKnown RBP eCLIP7.54□□□□□ -1.2
CLINT1-202ENST00000518855 TSPYL2Q9H2G4 693 aaPredicted RBP7.54□□□□□ -1.2
CLINT1-202ENST00000518855 WDR97A6NE52 1622 aa7.54□□□□□ -1.2
CLINT1-202ENST00000518855 ERICH6Q7L0X2 663 aa7.54□□□□□ -1.2
CLINT1-202ENST00000518855 CUL7Q14999 1698 aa7.53□□□□□ -1.2
CLINT1-202ENST00000518855 UBTFP17480 764 aaKnown RBP7.53□□□□□ -1.2
CLINT1-202ENST00000518855 THOC2Q8NI27 1593 aaKnown RBP7.53□□□□□ -1.2
CLINT1-202ENST00000518855 CCNB3Q8WWL7 1395 aa7.52□□□□□ -1.21
CLINT1-202ENST00000518855 RASEFQ8IZ41 740 aa7.51□□□□□ -1.21
CLINT1-202ENST00000518855 PLCD3Q8N3E9 789 aa7.51□□□□□ -1.21
CLINT1-202ENST00000518855 TIMELESSQ9UNS1 1208 aa7.51□□□□□ -1.21
CLINT1-202ENST00000518855 LRRC9Q6ZRR7 1453 aa7.51□□□□□ -1.21
CLINT1-202ENST00000518855 POLR1AO95602 1720 aaPredicted RBP7.5□□□□□ -1.21
CLINT1-202ENST00000518855 PAK3O75914 559 aaPredicted RBP7.5□□□□□ -1.21
CLINT1-202ENST00000518855 FYCO1Q9BQS8 1478 aa7.5□□□□□ -1.21
CLINT1-202ENST00000518855 DCBLD2Q96PD2 775 aa7.5□□□□□ -1.21
CLINT1-202ENST00000518855 CCDC61Q9Y6R9 512 aa7.49□□□□□ -1.21
CLINT1-202ENST00000518855 PCF11O94913 1555 aaKnown RBP7.49□□□□□ -1.21
CLINT1-202ENST00000518855 SAMD9Q5K651 1589 aa7.49□□□□□ -1.21
CLINT1-202ENST00000518855 GCC2Q8IWJ2 1684 aa7.48□□□□□ -1.21
CLINT1-202ENST00000518855 MS4A3Q96HJ5 214 aa7.48□□□□□ -1.21
CLINT1-202ENST00000518855 LRRIQ1Q96JM4 1722 aa7.47□□□□□ -1.21
CLINT1-202ENST00000518855 FHAD1B1AJZ9 1412 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms