RNA–Protein interactions for RNA: ENST00000518251.1

BRD9-216, Transcript of bromodomain containing 9, humanhuman

TSL 4

Gene BRD9, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-216ENST00000518251 PRG4Q92954 1404 aaPredicted RBP17.55■□□□□ 0.4
BRD9-216ENST00000518251 MAPKBP1O60336 1514 aa17.52■□□□□ 0.39
BRD9-216ENST00000518251 DIP2BQ9P265 1576 aa17.49■□□□□ 0.39
BRD9-216ENST00000518251 ADCY10Q96PN6 1610 aa17.49■□□□□ 0.39
BRD9-216ENST00000518251 ABCC10Q5T3U5 1492 aa17.48■□□□□ 0.39
BRD9-216ENST00000518251 JPH4Q96JJ6 628 aa17.43■□□□□ 0.38
BRD9-216ENST00000518251 CUL7Q14999 1698 aa17.39■□□□□ 0.37
BRD9-216ENST00000518251 KIAA0586Q9BVV6 1533 aa17.38■□□□□ 0.37
BRD9-216ENST00000518251 KDM6BO15054 1643 aa17.36■□□□□ 0.37
BRD9-216ENST00000518251 FAM69CQ0P6D2 419 aa17.35■□□□□ 0.37
BRD9-216ENST00000518251 EEA1Q15075 1411 aa17.32■□□□□ 0.36
BRD9-216ENST00000518251 IGF1RP08069 1367 aa17.3■□□□□ 0.36
BRD9-216ENST00000518251 KIF27Q86VH2 1401 aa17.3■□□□□ 0.36
BRD9-216ENST00000518251 NPM1P06748 294 aaKnown RBP eCLIP17.27■□□□□ 0.36
BRD9-216ENST00000518251 FAM9AQ8IZU1 332 aaPredicted RBP17.25■□□□□ 0.35
BRD9-216ENST00000518251 ABCC2Q92887 1545 aa17.25■□□□□ 0.35
BRD9-216ENST00000518251 PPRC1Q5VV67 1664 aaKnown RBP17.23■□□□□ 0.35
BRD9-216ENST00000518251 KDM4FA0A1W2PPD8 638 aa17.22■□□□□ 0.35
BRD9-216ENST00000518251 IQGAP2Q13576 1575 aa17.22■□□□□ 0.35
BRD9-216ENST00000518251 TSPOAP1O95153 1857 aa17.21■□□□□ 0.35
BRD9-216ENST00000518251 PTPRGP23470 1445 aa17.21■□□□□ 0.34
BRD9-216ENST00000518251 GLI2P10070 1586 aa17.2■□□□□ 0.34
BRD9-216ENST00000518251 ASXL2Q76L83 1435 aa17.19■□□□□ 0.34
BRD9-216ENST00000518251 UHRF1BP1LA0JNW5 1464 aa17.18■□□□□ 0.34
BRD9-216ENST00000518251 TNIKQ9UKE5 1360 aa17.18■□□□□ 0.34
BRD9-216ENST00000518251 DISP1Q96F81 1524 aa17.16■□□□□ 0.34
BRD9-216ENST00000518251 CARMIL1Q5VZK9 1371 aa17.16■□□□□ 0.34
BRD9-216ENST00000518251 CARMIL2Q6F5E8 1435 aa17.16■□□□□ 0.34
BRD9-216ENST00000518251 PLB1Q6P1J6 1458 aa17.16■□□□□ 0.34
BRD9-216ENST00000518251 CSRNP3Q8WYN3 585 aa17.14■□□□□ 0.33
BRD9-216ENST00000518251 KIF21BO75037 1637 aa17.13■□□□□ 0.33
BRD9-216ENST00000518251 MAP3K4Q9Y6R4 1608 aa17.13■□□□□ 0.33
BRD9-216ENST00000518251 UACAQ9BZF9 1416 aa17.12■□□□□ 0.33
BRD9-216ENST00000518251 ADGRL1O94910 1474 aa17.12■□□□□ 0.33
BRD9-216ENST00000518251 EPRSP07814 1512 aaKnown RBP17.11■□□□□ 0.33
BRD9-216ENST00000518251 UGGT2Q9NYU1 1516 aa17.11■□□□□ 0.33
BRD9-216ENST00000518251 KDM5BQ9UGL1 1544 aa17.11■□□□□ 0.33
BRD9-216ENST00000518251 KIAA0556O60303 1618 aa17.1■□□□□ 0.33
BRD9-216ENST00000518251 ZCCHC11Q5TAX3 1644 aaKnown RBP17.09■□□□□ 0.33
BRD9-216ENST00000518251 COL17A1Q9UMD9 1497 aaPredicted RBP17.08■□□□□ 0.32
BRD9-216ENST00000518251 TTBK1Q5TCY1 1321 aaPredicted RBP17.08■□□□□ 0.32
BRD9-216ENST00000518251 LOC105371045A0A1W2PR82 267 aa17.07■□□□□ 0.32
BRD9-216ENST00000518251 GOLGA3Q08378 1498 aa17.06■□□□□ 0.32
BRD9-216ENST00000518251 TEX14Q8IWB6 1497 aa17.04■□□□□ 0.32
BRD9-216ENST00000518251 PRXQ9BXM0 1461 aa17.03■□□□□ 0.32
BRD9-216ENST00000518251 RAPGEF2Q9Y4G8 1499 aa17.03■□□□□ 0.32
BRD9-216ENST00000518251 WDR7Q9Y4E6 1490 aa17.01■□□□□ 0.31
BRD9-216ENST00000518251 HECW2Q9P2P5 1572 aa16.99■□□□□ 0.31
BRD9-216ENST00000518251 EHMT2Q96KQ7 1210 aa16.99■□□□□ 0.31
BRD9-216ENST00000518251 CTTNBP2Q8WZ74 1663 aa16.95■□□□□ 0.3
BRD9-216ENST00000518251 ABCA8O94911 1581 aa16.94■□□□□ 0.3
BRD9-216ENST00000518251 ILDR1Q86SU0 546 aaPredicted RBP16.93■□□□□ 0.3
BRD9-216ENST00000518251 MAGI3Q5TCQ9 1506 aa16.92■□□□□ 0.3
BRD9-216ENST00000518251 CFAP43Q8NDM7 1665 aa16.92■□□□□ 0.3
BRD9-216ENST00000518251 UBTFP17480 764 aaKnown RBP16.89■□□□□ 0.29
BRD9-216ENST00000518251 CD109Q6YHK3 1445 aa16.85■□□□□ 0.29
BRD9-216ENST00000518251 CEP162Q5TB80 1403 aa16.84■□□□□ 0.29
BRD9-216ENST00000518251 ARAP3Q8WWN8 1544 aa16.79■□□□□ 0.28
BRD9-216ENST00000518251 ABCA9Q8IUA7 1624 aa16.77■□□□□ 0.27
BRD9-216ENST00000518251 CLIP1P30622 1438 aa16.75■□□□□ 0.27
BRD9-216ENST00000518251 SAMD9Q5K651 1589 aa16.74■□□□□ 0.27
BRD9-216ENST00000518251 FRMPD1Q5SYB0 1578 aa16.74■□□□□ 0.27
BRD9-216ENST00000518251 ATP10BO94823 1461 aa16.73■□□□□ 0.27
BRD9-216ENST00000518251 KCNH8Q96L42 1107 aa16.71■□□□□ 0.27
BRD9-216ENST00000518251 ADAMTSL3P82987 1691 aa16.71■□□□□ 0.27
BRD9-216ENST00000518251 RAPGEF6Q8TEU7 1601 aa16.69■□□□□ 0.26
BRD9-216ENST00000518251 PTPRMP28827 1452 aa16.68■□□□□ 0.26
BRD9-216ENST00000518251 NEO1Q92859 1461 aa16.67■□□□□ 0.26
BRD9-216ENST00000518251 ARHGEF40Q8TER5 1519 aa16.66■□□□□ 0.26
BRD9-216ENST00000518251 EFCAB5A4FU69 1503 aa16.65■□□□□ 0.26
BRD9-216ENST00000518251 ARID3CA6NKF2 412 aa16.65■□□□□ 0.26
BRD9-216ENST00000518251 NUP153P49790 1475 aaKnown RBP16.65■□□□□ 0.26
BRD9-216ENST00000518251 BCORL1Q5H9F3 1711 aa16.65■□□□□ 0.26
BRD9-216ENST00000518251 PHLDB1Q86UU1 1377 aa16.64■□□□□ 0.26
BRD9-216ENST00000518251 MADDQ8WXG6 1647 aa16.64■□□□□ 0.25
BRD9-216ENST00000518251 ARHGAP35Q9NRY4 1499 aa16.63■□□□□ 0.25
BRD9-216ENST00000518251 RANGAP1P46060 587 aaPredicted RBP16.63■□□□□ 0.25
BRD9-216ENST00000518251 PCF11O94913 1555 aaKnown RBP16.63■□□□□ 0.25
BRD9-216ENST00000518251 VPS8Q8N3P4 1428 aa16.6■□□□□ 0.25
BRD9-216ENST00000518251 LMTK3Q96Q04 1460 aa16.6■□□□□ 0.25
BRD9-216ENST00000518251 P3H3Q8IVL6 736 aa16.59■□□□□ 0.25
BRD9-216ENST00000518251 RAPGEF3O95398 923 aa16.58■□□□□ 0.24
BRD9-216ENST00000518251 RICTORQ6R327 1708 aa16.58■□□□□ 0.24
BRD9-216ENST00000518251 FHOD3Q2V2M9 1422 aa16.56■□□□□ 0.24
BRD9-216ENST00000518251 ZMYM4Q5VZL5 1548 aa16.55■□□□□ 0.24
BRD9-216ENST00000518251 TTC37Q6PGP7 1564 aa16.55■□□□□ 0.24
BRD9-216ENST00000518251 CFAP74Q9C0B2 1584 aa16.55■□□□□ 0.24
BRD9-216ENST00000518251 RIMS1Q86UR5 1692 aaKnown RBP16.54■□□□□ 0.24
BRD9-216ENST00000518251 SIGLEC1Q9BZZ2 1709 aa16.53■□□□□ 0.24
BRD9-216ENST00000518251 FBXO41Q8TF61 875 aa16.53■□□□□ 0.24
BRD9-216ENST00000518251 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.53■□□□□ 0.24
BRD9-216ENST00000518251 FANCAO15360 1455 aa16.52■□□□□ 0.23
BRD9-216ENST00000518251 DENND4BO75064 1496 aaPredicted RBP16.52■□□□□ 0.23
BRD9-216ENST00000518251 ZFYVE16Q7Z3T8 1539 aa16.49■□□□□ 0.23
BRD9-216ENST00000518251 AKNAQ7Z591 1439 aa16.48■□□□□ 0.23
BRD9-216ENST00000518251 YEATS2Q9ULM3 1422 aa16.47■□□□□ 0.23
BRD9-216ENST00000518251 FMN1Q68DA7 1419 aa16.45■□□□□ 0.22
BRD9-216ENST00000518251 CDK13Q14004 1512 aaKnown RBP16.45■□□□□ 0.22
BRD9-216ENST00000518251 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.45■□□□□ 0.22
BRD9-216ENST00000518251 HNRNPUL2Q1KMD3 747 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms