RNA–Protein interactions for RNA: ENST00000518059.5

UBXN8-204, Transcript of UBX domain protein 8, humanhuman

TSL 3

Gene UBXN8, Length 493 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN8-204ENST00000518059 ARHGAP35Q9NRY4 1499 aa11.32□□□□□ -0.6
UBXN8-204ENST00000518059 KCNA4P22459 653 aa11.3□□□□□ -0.6
UBXN8-204ENST00000518059 ABCA5Q8WWZ7 1642 aa11.3□□□□□ -0.6
UBXN8-204ENST00000518059 NCBP3Q53F19 620 aaKnown RBP11.29□□□□□ -0.6
UBXN8-204ENST00000518059 CNKSR2Q8WXI2 1034 aa11.29□□□□□ -0.6
UBXN8-204ENST00000518059 MRC2Q9UBG0 1479 aa11.28□□□□□ -0.6
UBXN8-204ENST00000518059 CCER1Q8TC90 406 aaPredicted RBP11.28□□□□□ -0.6
UBXN8-204ENST00000518059 EFCAB5A4FU69 1503 aa11.28□□□□□ -0.6
UBXN8-204ENST00000518059 CTTNBP2Q8WZ74 1663 aa11.27□□□□□ -0.6
UBXN8-204ENST00000518059 GAPVD1Q14C86 1478 aa11.27□□□□□ -0.6
UBXN8-204ENST00000518059 FHAD1B1AJZ9 1412 aa11.26□□□□□ -0.61
UBXN8-204ENST00000518059 DMRT2Q9Y5R5 561 aa11.26□□□□□ -0.61
UBXN8-204ENST00000518059 MAP3K1Q13233 1512 aa11.25□□□□□ -0.61
UBXN8-204ENST00000518059 DNAJC5BQ9UF47 199 aa11.24□□□□□ -0.61
UBXN8-204ENST00000518059 TARBP1Q13395 1621 aaKnown RBP11.24□□□□□ -0.61
UBXN8-204ENST00000518059 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.23□□□□□ -0.61
UBXN8-204ENST00000518059 TDRD9Q8NDG6 1382 aaKnown RBP11.21□□□□□ -0.61
UBXN8-204ENST00000518059 PBRM1Q86U86 1689 aa11.2□□□□□ -0.62
UBXN8-204ENST00000518059 TIAM1Q13009 1591 aa11.2□□□□□ -0.62
UBXN8-204ENST00000518059 CFAP43Q8NDM7 1665 aa11.19□□□□□ -0.62
UBXN8-204ENST00000518059 WDR62O43379 1518 aa11.19□□□□□ -0.62
UBXN8-204ENST00000518059 IFT140Q96RY7 1462 aa11.19□□□□□ -0.62
UBXN8-204ENST00000518059 FYCO1Q9BQS8 1478 aa11.19□□□□□ -0.62
UBXN8-204ENST00000518059 AQRO60306 1485 aaKnown RBP eCLIP11.18□□□□□ -0.622e-6■■■■■ 26.9
UBXN8-204ENST00000518059 PCF11O94913 1555 aaKnown RBP11.17□□□□□ -0.62
UBXN8-204ENST00000518059 HNRNPUL2Q1KMD3 747 aaKnown RBP11.17□□□□□ -0.62
UBXN8-204ENST00000518059 RRBP1Q9P2E9 1410 aaKnown RBP11.17□□□□□ -0.62
UBXN8-204ENST00000518059 ERCC6Q03468 1493 aa11.16□□□□□ -0.62
UBXN8-204ENST00000518059 GRIN2BQ13224 1484 aa11.16□□□□□ -0.62
UBXN8-204ENST00000518059 FHOD3Q2V2M9 1422 aa11.16□□□□□ -0.62
UBXN8-204ENST00000518059 FMN1Q68DA7 1419 aa11.16□□□□□ -0.62
UBXN8-204ENST00000518059 ADAMTS12P58397 1594 aa11.16□□□□□ -0.62
UBXN8-204ENST00000518059 KANK4Q5T7N3 995 aaPredicted RBP11.15□□□□□ -0.62
UBXN8-204ENST00000518059 CASKIN1Q8WXD9 1431 aa11.15□□□□□ -0.62
UBXN8-204ENST00000518059 SAMD9Q5K651 1589 aa11.14□□□□□ -0.63
UBXN8-204ENST00000518059 LRRC9Q6ZRR7 1453 aa11.13□□□□□ -0.63
UBXN8-204ENST00000518059 CCNB3Q8WWL7 1395 aa11.13□□□□□ -0.63
UBXN8-204ENST00000518059 NPM3O75607 178 aaKnown RBP11.12□□□□□ -0.63
UBXN8-204ENST00000518059 P3H3Q8IVL6 736 aa11.11□□□□□ -0.63
UBXN8-204ENST00000518059 THOC2Q8NI27 1593 aaKnown RBP11.11□□□□□ -0.63
UBXN8-204ENST00000518059 IQGAP2Q13576 1575 aa11.1□□□□□ -0.63
UBXN8-204ENST00000518059 RNF216Q9NWF9 866 aaPredicted RBP11.08□□□□□ -0.64
UBXN8-204ENST00000518059 SNAPC4Q5SXM2 1469 aa11.07□□□□□ -0.64
UBXN8-204ENST00000518059 ATP1B4Q9UN42 357 aaPredicted RBP11.07□□□□□ -0.64
UBXN8-204ENST00000518059 EIF4G3O43432 1585 aaKnown RBP11.07□□□□□ -0.64
UBXN8-204ENST00000518059 HOXD11P31277 338 aaPredicted RBP11.06□□□□□ -0.64
UBXN8-204ENST00000518059 CLSPNQ9HAW4 1339 aa11.06□□□□□ -0.64
UBXN8-204ENST00000518059 ZNF608Q9ULD9 1512 aaPredicted RBP11.04□□□□□ -0.64
UBXN8-204ENST00000518059 CCDC18Q5T9S5 1454 aa11.04□□□□□ -0.64
UBXN8-204ENST00000518059 MAGI1Q96QZ7 1491 aaPredicted RBP11.04□□□□□ -0.64
UBXN8-204ENST00000518059 HECW1Q76N89 1606 aa11.03□□□□□ -0.64
UBXN8-204ENST00000518059 UGGT2Q9NYU1 1516 aa11.03□□□□□ -0.64
UBXN8-204ENST00000518059 MTUS2Q5JR59 1369 aa11.03□□□□□ -0.64
UBXN8-204ENST00000518059 EHBP1L1Q8N3D4 1523 aa11.02□□□□□ -0.65
UBXN8-204ENST00000518059 PHLDB1Q86UU1 1377 aa11.02□□□□□ -0.65
UBXN8-204ENST00000518059 GRIN2AQ12879 1464 aa11.01□□□□□ -0.65
UBXN8-204ENST00000518059 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.01□□□□□ -0.65
UBXN8-204ENST00000518059 KIAA0586Q9BVV6 1533 aa11□□□□□ -0.65
UBXN8-204ENST00000518059 SUPT6HQ7KZ85 1726 aaKnown RBP10.99□□□□□ -0.65
UBXN8-204ENST00000518059 FAM50AQ14320 339 aaKnown RBP10.98□□□□□ -0.65
UBXN8-204ENST00000518059 DHX57Q6P158 1386 aaKnown RBP10.98□□□□□ -0.65
UBXN8-204ENST00000518059 SYNJ2O15056 1496 aa10.98□□□□□ -0.65
UBXN8-204ENST00000518059 KIAA0556O60303 1618 aa10.97□□□□□ -0.65
UBXN8-204ENST00000518059 LRRIQ1Q96JM4 1722 aa10.96□□□□□ -0.65
UBXN8-204ENST00000518059 FGD6Q6ZV73 1430 aa10.96□□□□□ -0.65
UBXN8-204ENST00000518059 ITGAEP38570 1179 aa10.96□□□□□ -0.65
UBXN8-204ENST00000518059 SETD5Q9C0A6 1442 aa10.95□□□□□ -0.66
UBXN8-204ENST00000518059 NCOA2Q15596 1464 aa10.94□□□□□ -0.66
UBXN8-204ENST00000518059 CHMP7Q8WUX9 453 aaPredicted RBP10.94□□□□□ -0.66
UBXN8-204ENST00000518059 MYOM3Q5VTT5 1437 aa10.93□□□□□ -0.66
UBXN8-204ENST00000518059 RAB3GAP2Q9H2M9 1393 aa10.93□□□□□ -0.66
UBXN8-204ENST00000518059 EPRSP07814 1512 aaKnown RBP10.93□□□□□ -0.66
UBXN8-204ENST00000518059 ZNF316A6NFI3 1004 aaPredicted RBP10.92□□□□□ -0.66
UBXN8-204ENST00000518059 DISP1Q96F81 1524 aa10.92□□□□□ -0.66
UBXN8-204ENST00000518059 NUP160Q12769 1436 aa10.91□□□□□ -0.66
UBXN8-204ENST00000518059 CARMIL2Q6F5E8 1435 aa10.91□□□□□ -0.66
UBXN8-204ENST00000518059 CEP170Q5SW79 1584 aa10.9□□□□□ -0.66
UBXN8-204ENST00000518059 ARHGEF11O15085 1522 aa10.9□□□□□ -0.66
UBXN8-204ENST00000518059 RAPGEF6Q8TEU7 1601 aa10.9□□□□□ -0.66
UBXN8-204ENST00000518059 PTPN23Q9H3S7 1636 aa10.89□□□□□ -0.67
UBXN8-204ENST00000518059 DIEXFQ68CQ4 756 aaKnown RBP10.88□□□□□ -0.67
UBXN8-204ENST00000518059 CDK13Q14004 1512 aaKnown RBP10.88□□□□□ -0.67
UBXN8-204ENST00000518059 FBLN2P98095 1184 aa10.87□□□□□ -0.67
UBXN8-204ENST00000518059 CDK11AQ9UQ88 783 aaPredicted RBP10.87□□□□□ -0.67
UBXN8-204ENST00000518059 MAGI3Q5TCQ9 1506 aa10.87□□□□□ -0.67
UBXN8-204ENST00000518059 TCOF1Q13428 1488 aaKnown RBP10.87□□□□□ -0.67
UBXN8-204ENST00000518059 MIA2Q96PC5 1412 aa10.86□□□□□ -0.67
UBXN8-204ENST00000518059 NUP153P49790 1475 aaKnown RBP10.84□□□□□ -0.67
UBXN8-204ENST00000518059 MAPKBP1O60336 1514 aa10.84□□□□□ -0.67
UBXN8-204ENST00000518059 HFM1A2PYH4 1435 aa10.84□□□□□ -0.67
UBXN8-204ENST00000518059 AKNAQ7Z591 1439 aa10.82□□□□□ -0.68
UBXN8-204ENST00000518059 JPH4Q96JJ6 628 aa10.81□□□□□ -0.68
UBXN8-204ENST00000518059 GCC2Q8IWJ2 1684 aa10.8□□□□□ -0.68
UBXN8-204ENST00000518059 ITSN2Q9NZM3 1697 aa10.8□□□□□ -0.68
UBXN8-204ENST00000518059 TROQ12816 1431 aaPredicted RBP10.8□□□□□ -0.68
UBXN8-204ENST00000518059 ACIN1Q9UKV3 1341 aaKnown RBP10.8□□□□□ -0.68
UBXN8-204ENST00000518059 ADCY10Q96PN6 1610 aa10.79□□□□□ -0.68
UBXN8-204ENST00000518059 NAIPQ13075 1403 aa10.78□□□□□ -0.68
UBXN8-204ENST00000518059 UACAQ9BZF9 1416 aa10.78□□□□□ -0.68
UBXN8-204ENST00000518059 ARID3CA6NKF2 412 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms