RNA–Protein interactions for RNA: ENST00000517325.5

CHMP7-203, Transcript of charged multivesicular body protein 7, humanhuman

TSL 2

Gene CHMP7, Length 2,639 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-203ENST00000517325 TDRD9Q8NDG6 1382 aaKnown RBP24.92■■□□□ 1.58
CHMP7-203ENST00000517325 P3H3Q8IVL6 736 aa24.92■■□□□ 1.58
CHMP7-203ENST00000517325 FHAD1B1AJZ9 1412 aa24.91■■□□□ 1.58
CHMP7-203ENST00000517325 ACIN1Q9UKV3 1341 aaKnown RBP24.91■■□□□ 1.58
CHMP7-203ENST00000517325 CCNB3Q8WWL7 1395 aa24.9■■□□□ 1.58
CHMP7-203ENST00000517325 CTTNBP2Q8WZ74 1663 aa24.89■■□□□ 1.57
CHMP7-203ENST00000517325 PCF11O94913 1555 aaKnown RBP24.89■■□□□ 1.57
CHMP7-203ENST00000517325 FHOD3Q2V2M9 1422 aa24.88■■□□□ 1.57
CHMP7-203ENST00000517325 GAPVD1Q14C86 1478 aa24.87■■□□□ 1.57
CHMP7-203ENST00000517325 EFCAB5A4FU69 1503 aa24.86■■□□□ 1.57
CHMP7-203ENST00000517325 LRRC9Q6ZRR7 1453 aa24.86■■□□□ 1.57
CHMP7-203ENST00000517325 DIEXFQ68CQ4 756 aaKnown RBP24.84■■□□□ 1.57
CHMP7-203ENST00000517325 CFAP43Q8NDM7 1665 aa24.83■■□□□ 1.56
CHMP7-203ENST00000517325 DHX57Q6P158 1386 aaKnown RBP24.82■■□□□ 1.56
CHMP7-203ENST00000517325 TARBP1Q13395 1621 aaKnown RBP24.8■■□□□ 1.56
CHMP7-203ENST00000517325 ZNF316A6NFI3 1004 aaPredicted RBP24.79■■□□□ 1.56
CHMP7-203ENST00000517325 FYCO1Q9BQS8 1478 aa24.77■■□□□ 1.56
CHMP7-203ENST00000517325 GTF3C3Q9Y5Q9 886 aa24.77■■□□□ 1.56
CHMP7-203ENST00000517325 PHLDB1Q86UU1 1377 aa24.75■■□□□ 1.55
CHMP7-203ENST00000517325 CASKIN1Q8WXD9 1431 aa24.75■■□□□ 1.55
CHMP7-203ENST00000517325 ATP1B4Q9UN42 357 aaPredicted RBP24.75■■□□□ 1.55
CHMP7-203ENST00000517325 CLSPNQ9HAW4 1339 aa24.74■■□□□ 1.55
CHMP7-203ENST00000517325 AQRO60306 1485 aaKnown RBP eCLIP24.74■■□□□ 1.553e-6■■■■□ 23
CHMP7-203ENST00000517325 ITGAEP38570 1179 aa24.74■■□□□ 1.55
CHMP7-203ENST00000517325 SAMD9Q5K651 1589 aa24.69■■□□□ 1.54
CHMP7-203ENST00000517325 FMN1Q68DA7 1419 aa24.68■■□□□ 1.54
CHMP7-203ENST00000517325 MRC2Q9UBG0 1479 aa24.68■■□□□ 1.54
CHMP7-203ENST00000517325 SNAPC4Q5SXM2 1469 aa24.67■■□□□ 1.54
CHMP7-203ENST00000517325 PBRM1Q86U86 1689 aa24.64■■□□□ 1.53
CHMP7-203ENST00000517325 RAB3GAP2Q9H2M9 1393 aa24.6■■□□□ 1.53
CHMP7-203ENST00000517325 FAM50AQ14320 339 aaKnown RBP24.58■■□□□ 1.53
CHMP7-203ENST00000517325 ADAMTS12P58397 1594 aa24.56■■□□□ 1.52
CHMP7-203ENST00000517325 LRRIQ1Q96JM4 1722 aa24.55■■□□□ 1.52
CHMP7-203ENST00000517325 CENPBP07199 599 aaPredicted RBP24.54■■□□□ 1.52
CHMP7-203ENST00000517325 GRIN2BQ13224 1484 aa24.54■■□□□ 1.52
CHMP7-203ENST00000517325 SETD5Q9C0A6 1442 aa24.53■■□□□ 1.52
CHMP7-203ENST00000517325 WDR62O43379 1518 aa24.51■■□□□ 1.51
CHMP7-203ENST00000517325 ZNF608Q9ULD9 1512 aaPredicted RBP24.49■■□□□ 1.51
CHMP7-203ENST00000517325 MTUS2Q5JR59 1369 aa24.49■■□□□ 1.51
CHMP7-203ENST00000517325 IFT140Q96RY7 1462 aa24.48■■□□□ 1.51
CHMP7-203ENST00000517325 MAPKBP1O60336 1514 aa24.48■■□□□ 1.51
CHMP7-203ENST00000517325 THOC2Q8NI27 1593 aaKnown RBP24.48■■□□□ 1.51
CHMP7-203ENST00000517325 IQGAP2Q13576 1575 aa24.47■■□□□ 1.51
CHMP7-203ENST00000517325 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.47■■□□□ 1.51
CHMP7-203ENST00000517325 FGD6Q6ZV73 1430 aa24.46■■□□□ 1.51
CHMP7-203ENST00000517325 NCOA2Q15596 1464 aa24.4■■□□□ 1.5
CHMP7-203ENST00000517325 EHBP1L1Q8N3D4 1523 aa24.38■■□□□ 1.49
CHMP7-203ENST00000517325 MIER1Q8N108 512 aa24.37■■□□□ 1.49
CHMP7-203ENST00000517325 MAGI3Q5TCQ9 1506 aa24.36■■□□□ 1.49
CHMP7-203ENST00000517325 SUPT6HQ7KZ85 1726 aaKnown RBP24.36■■□□□ 1.49
CHMP7-203ENST00000517325 YTHDC1Q96MU7 727 aaKnown RBP24.35■■□□□ 1.49
CHMP7-203ENST00000517325 MYT1Q01538 1121 aa24.34■■□□□ 1.49
CHMP7-203ENST00000517325 CCDC18Q5T9S5 1454 aa24.34■■□□□ 1.49
CHMP7-203ENST00000517325 MYOM3Q5VTT5 1437 aa24.34■■□□□ 1.49
CHMP7-203ENST00000517325 EIF4G3O43432 1585 aaKnown RBP24.34■■□□□ 1.49
CHMP7-203ENST00000517325 ERCC6Q03468 1493 aa24.33■■□□□ 1.49
CHMP7-203ENST00000517325 HECW1Q76N89 1606 aa24.33■■□□□ 1.49
CHMP7-203ENST00000517325 UGGT2Q9NYU1 1516 aa24.33■■□□□ 1.49
CHMP7-203ENST00000517325 PTPRKQ15262 1439 aa24.31■■□□□ 1.48
CHMP7-203ENST00000517325 ARHGEF11O15085 1522 aa24.3■■□□□ 1.48
CHMP7-203ENST00000517325 EPRSP07814 1512 aaKnown RBP24.28■■□□□ 1.48
CHMP7-203ENST00000517325 KIAA0586Q9BVV6 1533 aa24.27■■□□□ 1.48
CHMP7-203ENST00000517325 GRIN2AQ12879 1464 aa24.26■■□□□ 1.47
CHMP7-203ENST00000517325 CDK13Q14004 1512 aaKnown RBP24.25■■□□□ 1.47
CHMP7-203ENST00000517325 SIN3AQ96ST3 1273 aa24.24■■□□□ 1.47
CHMP7-203ENST00000517325 PTPN23Q9H3S7 1636 aa24.24■■□□□ 1.47
CHMP7-203ENST00000517325 HFM1A2PYH4 1435 aa24.23■■□□□ 1.47
CHMP7-203ENST00000517325 DISP1Q96F81 1524 aa24.23■■□□□ 1.47
CHMP7-203ENST00000517325 KIAA0556O60303 1618 aa24.22■■□□□ 1.47
CHMP7-203ENST00000517325 ARID3CA6NKF2 412 aa24.19■■□□□ 1.46
CHMP7-203ENST00000517325 NAIPQ13075 1403 aa24.17■■□□□ 1.46
CHMP7-203ENST00000517325 MAGI1Q96QZ7 1491 aaPredicted RBP24.17■■□□□ 1.46
CHMP7-203ENST00000517325 TCOF1Q13428 1488 aaKnown RBP24.16■■□□□ 1.46
CHMP7-203ENST00000517325 UACAQ9BZF9 1416 aa24.12■■□□□ 1.45
CHMP7-203ENST00000517325 SYNJ2O15056 1496 aa24.12■■□□□ 1.45
CHMP7-203ENST00000517325 CEP170Q5SW79 1584 aa24.11■■□□□ 1.45
CHMP7-203ENST00000517325 NUP153P49790 1475 aaKnown RBP24.1■■□□□ 1.45
CHMP7-203ENST00000517325 CHMP7Q8WUX9 453 aaPredicted RBP24.1■■□□□ 1.45
CHMP7-203ENST00000517325 TIMELESSQ9UNS1 1208 aa24.08■■□□□ 1.45
CHMP7-203ENST00000517325 RAPGEF6Q8TEU7 1601 aa24.08■■□□□ 1.45
CHMP7-203ENST00000517325 MIA2Q96PC5 1412 aa24.08■■□□□ 1.44
CHMP7-203ENST00000517325 FBLN2P98095 1184 aa24.04■■□□□ 1.44
CHMP7-203ENST00000517325 CHIC2Q9UKJ5 165 aa24.04■■□□□ 1.44
CHMP7-203ENST00000517325 RRP7BPQ9NSQ0 103 aa24.03■■□□□ 1.44
CHMP7-203ENST00000517325 GCC2Q8IWJ2 1684 aa24.02■■□□□ 1.44
CHMP7-203ENST00000517325 NUP160Q12769 1436 aa24.01■■□□□ 1.43
CHMP7-203ENST00000517325 PPP1R15AO75807 674 aaPredicted RBP24■■□□□ 1.43
CHMP7-203ENST00000517325 AKNAQ7Z591 1439 aa23.99■■□□□ 1.43
CHMP7-203ENST00000517325 PLB1Q6P1J6 1458 aa23.97■■□□□ 1.43
CHMP7-203ENST00000517325 KDM6BO15054 1643 aa23.96■■□□□ 1.43
CHMP7-203ENST00000517325 TONSLQ96HA7 1378 aa23.95■■□□□ 1.42
CHMP7-203ENST00000517325 JPH4Q96JJ6 628 aa23.94■■□□□ 1.42
CHMP7-203ENST00000517325 CDK11AQ9UQ88 783 aaPredicted RBP23.93■■□□□ 1.42
CHMP7-203ENST00000517325 CARMIL2Q6F5E8 1435 aa23.92■■□□□ 1.42
CHMP7-203ENST00000517325 PRG4Q92954 1404 aaPredicted RBP23.92■■□□□ 1.42
CHMP7-203ENST00000517325 DENND4BO75064 1496 aaPredicted RBP23.91■■□□□ 1.42
CHMP7-203ENST00000517325 DAPK1P53355 1430 aa23.91■■□□□ 1.42
CHMP7-203ENST00000517325 TROQ12816 1431 aaPredicted RBP23.9■■□□□ 1.42
CHMP7-203ENST00000517325 ZNF644Q9H582 1327 aaPredicted RBP23.9■■□□□ 1.42
CHMP7-203ENST00000517325 DNMT1P26358 1616 aaKnown RBP23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms