RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 JPH4Q96JJ6 628 aa8.77□□□□□ -1.01
SCARNA16.4-201ENST00000516956 NUP160Q12769 1436 aa8.77□□□□□ -1.01
SCARNA16.4-201ENST00000516956 DNAJC5Q9H3Z4 198 aa8.76□□□□□ -1.01
SCARNA16.4-201ENST00000516956 CEP170Q5SW79 1584 aa8.75□□□□□ -1.01
SCARNA16.4-201ENST00000516956 CARMIL2Q6F5E8 1435 aa8.75□□□□□ -1.01
SCARNA16.4-201ENST00000516956 TTBK1Q5TCY1 1321 aaPredicted RBP8.75□□□□□ -1.01
SCARNA16.4-201ENST00000516956 IQGAP2Q13576 1575 aa8.73□□□□□ -1.01
SCARNA16.4-201ENST00000516956 CLASP1Q7Z460 1538 aa8.73□□□□□ -1.01
SCARNA16.4-201ENST00000516956 PRG4Q92954 1404 aaPredicted RBP8.72□□□□□ -1.01
SCARNA16.4-201ENST00000516956 CTTNBP2Q8WZ74 1663 aa8.72□□□□□ -1.01
SCARNA16.4-201ENST00000516956 LOC105371045A0A1W2PR82 267 aa8.72□□□□□ -1.01
SCARNA16.4-201ENST00000516956 P3H3Q8IVL6 736 aa8.7□□□□□ -1.02
SCARNA16.4-201ENST00000516956 TNIKQ9UKE5 1360 aa8.7□□□□□ -1.02
SCARNA16.4-201ENST00000516956 CYB5RLQ6IPT4 315 aa8.68□□□□□ -1.02
SCARNA16.4-201ENST00000516956 ARHGEF11O15085 1522 aa8.68□□□□□ -1.02
SCARNA16.4-201ENST00000516956 NPM1P06748 294 aaKnown RBP eCLIP8.67□□□□□ -1.02
SCARNA16.4-201ENST00000516956 PTPRGP23470 1445 aa8.67□□□□□ -1.02
SCARNA16.4-201ENST00000516956 UGGT2Q9NYU1 1516 aa8.67□□□□□ -1.02
SCARNA16.4-201ENST00000516956 SHROOM2Q13796 1616 aa8.66□□□□□ -1.02
SCARNA16.4-201ENST00000516956 ATP1B4Q9UN42 357 aaPredicted RBP8.66□□□□□ -1.02
SCARNA16.4-201ENST00000516956 RIMBP3CA6NJZ7 1639 aa8.65□□□□□ -1.02
SCARNA16.4-201ENST00000516956 RIMBP3BA6NNM3 1639 aa8.65□□□□□ -1.02
SCARNA16.4-201ENST00000516956 RIMBP3Q9UFD9 1639 aa8.65□□□□□ -1.02
SCARNA16.4-201ENST00000516956 CLIP1P30622 1438 aa8.65□□□□□ -1.02
SCARNA16.4-201ENST00000516956 EFCAB5A4FU69 1503 aa8.64□□□□□ -1.03
SCARNA16.4-201ENST00000516956 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.63□□□□□ -1.03
SCARNA16.4-201ENST00000516956 HNRNPUL2Q1KMD3 747 aaKnown RBP8.63□□□□□ -1.03
SCARNA16.4-201ENST00000516956 KIAA0556O60303 1618 aa8.62□□□□□ -1.03
SCARNA16.4-201ENST00000516956 DISP1Q96F81 1524 aa8.62□□□□□ -1.03
SCARNA16.4-201ENST00000516956 CEP162Q5TB80 1403 aa8.62□□□□□ -1.03
SCARNA16.4-201ENST00000516956 ERCC6L2Q5T890 1561 aa8.61□□□□□ -1.03
SCARNA16.4-201ENST00000516956 FHOD3Q2V2M9 1422 aa8.61□□□□□ -1.03
SCARNA16.4-201ENST00000516956 FMN1Q68DA7 1419 aa8.61□□□□□ -1.03
SCARNA16.4-201ENST00000516956 ARAP1Q96P48 1450 aa8.6□□□□□ -1.03
SCARNA16.4-201ENST00000516956 APLP2Q06481 763 aa8.6□□□□□ -1.03
SCARNA16.4-201ENST00000516956 SAMD9Q5K651 1589 aa8.6□□□□□ -1.03
SCARNA16.4-201ENST00000516956 UACAQ9BZF9 1416 aa8.59□□□□□ -1.03
SCARNA16.4-201ENST00000516956 ARHGAP35Q9NRY4 1499 aa8.58□□□□□ -1.04
SCARNA16.4-201ENST00000516956 ARID3CA6NKF2 412 aa8.57□□□□□ -1.04
SCARNA16.4-201ENST00000516956 CDK11AQ9UQ88 783 aaPredicted RBP8.56□□□□□ -1.04
SCARNA16.4-201ENST00000516956 PLB1Q6P1J6 1458 aa8.54□□□□□ -1.04
SCARNA16.4-201ENST00000516956 ABCC2Q92887 1545 aa8.54□□□□□ -1.04
SCARNA16.4-201ENST00000516956 UHRF1BP1LA0JNW5 1464 aa8.53□□□□□ -1.04
SCARNA16.4-201ENST00000516956 PLEKHD1A6NEE1 506 aa8.53□□□□□ -1.04
SCARNA16.4-201ENST00000516956 RAPGEF6Q8TEU7 1601 aa8.53□□□□□ -1.04
SCARNA16.4-201ENST00000516956 TRHP20396 242 aaPredicted RBP8.52□□□□□ -1.05
SCARNA16.4-201ENST00000516956 CASKIN1Q8WXD9 1431 aa8.52□□□□□ -1.05
SCARNA16.4-201ENST00000516956 HECW1Q76N89 1606 aa8.51□□□□□ -1.05
SCARNA16.4-201ENST00000516956 VPS8Q8N3P4 1428 aa8.51□□□□□ -1.05
SCARNA16.4-201ENST00000516956 ABCA8O94911 1581 aa8.51□□□□□ -1.05
SCARNA16.4-201ENST00000516956 FYCO1Q9BQS8 1478 aa8.51□□□□□ -1.05
SCARNA16.4-201ENST00000516956 KCNH8Q96L42 1107 aa8.5□□□□□ -1.05
SCARNA16.4-201ENST00000516956 ADCY10Q96PN6 1610 aa8.5□□□□□ -1.05
SCARNA16.4-201ENST00000516956 CCDC18Q5T9S5 1454 aa8.49□□□□□ -1.05
SCARNA16.4-201ENST00000516956 KDM5BQ9UGL1 1544 aa8.48□□□□□ -1.05
SCARNA16.4-201ENST00000516956 PCF11O94913 1555 aaKnown RBP8.48□□□□□ -1.05
SCARNA16.4-201ENST00000516956 ATP10BO94823 1461 aa8.47□□□□□ -1.05
SCARNA16.4-201ENST00000516956 NUP153P49790 1475 aaKnown RBP8.47□□□□□ -1.05
SCARNA16.4-201ENST00000516956 EPRSP07814 1512 aaKnown RBP8.47□□□□□ -1.05
SCARNA16.4-201ENST00000516956 MTUS2Q5JR59 1369 aa8.47□□□□□ -1.05
SCARNA16.4-201ENST00000516956 ZCCHC11Q5TAX3 1644 aaKnown RBP8.47□□□□□ -1.05
SCARNA16.4-201ENST00000516956 ASXL2Q76L83 1435 aa8.46□□□□□ -1.05
SCARNA16.4-201ENST00000516956 FAM69CQ0P6D2 419 aa8.46□□□□□ -1.06
SCARNA16.4-201ENST00000516956 CDK13Q14004 1512 aaKnown RBP8.44□□□□□ -1.06
SCARNA16.4-201ENST00000516956 WDR7Q9Y4E6 1490 aa8.44□□□□□ -1.06
SCARNA16.4-201ENST00000516956 MAPKBP1O60336 1514 aa8.44□□□□□ -1.06
SCARNA16.4-201ENST00000516956 TROQ12816 1431 aaPredicted RBP8.41□□□□□ -1.06
SCARNA16.4-201ENST00000516956 ABCC10Q5T3U5 1492 aa8.4□□□□□ -1.06
SCARNA16.4-201ENST00000516956 TIAM1Q13009 1591 aa8.39□□□□□ -1.07
SCARNA16.4-201ENST00000516956 MAP3K1Q13233 1512 aa8.39□□□□□ -1.07
SCARNA16.4-201ENST00000516956 KIF14Q15058 1648 aa8.39□□□□□ -1.07
SCARNA16.4-201ENST00000516956 CD109Q6YHK3 1445 aa8.38□□□□□ -1.07
SCARNA16.4-201ENST00000516956 CCNB3Q8WWL7 1395 aa8.38□□□□□ -1.07
SCARNA16.4-201ENST00000516956 PPARGC1BQ86YN6 1023 aaKnown RBP8.38□□□□□ -1.07
SCARNA16.4-201ENST00000516956 EHBP1L1Q8N3D4 1523 aa8.38□□□□□ -1.07
SCARNA16.4-201ENST00000516956 CFAP43Q8NDM7 1665 aa8.37□□□□□ -1.07
SCARNA16.4-201ENST00000516956 EFCAB2Q5VUJ9 269 aa8.37□□□□□ -1.07
SCARNA16.4-201ENST00000516956 ZNF777Q9ULD5 760 aaPredicted RBP8.37□□□□□ -1.07
SCARNA16.4-201ENST00000516956 LRRC9Q6ZRR7 1453 aa8.37□□□□□ -1.07
SCARNA16.4-201ENST00000516956 DIP2BQ9P265 1576 aa8.36□□□□□ -1.07
SCARNA16.4-201ENST00000516956 KANK4Q5T7N3 995 aaPredicted RBP8.36□□□□□ -1.07
SCARNA16.4-201ENST00000516956 CFDP1Q9UEE9 299 aaPredicted RBP8.36□□□□□ -1.07
SCARNA16.4-201ENST00000516956 TEX14Q8IWB6 1497 aa8.36□□□□□ -1.07
SCARNA16.4-201ENST00000516956 GLI2P10070 1586 aa8.35□□□□□ -1.07
SCARNA16.4-201ENST00000516956 SUPT6HQ7KZ85 1726 aaKnown RBP8.35□□□□□ -1.07
SCARNA16.4-201ENST00000516956 LRRIQ1Q96JM4 1722 aa8.35□□□□□ -1.07
SCARNA16.4-201ENST00000516956 MYT1LQ9UL68 1186 aa8.35□□□□□ -1.07
SCARNA16.4-201ENST00000516956 ARHGAP5Q13017 1502 aa8.33□□□□□ -1.08
SCARNA16.4-201ENST00000516956 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.33□□□□□ -1.08
SCARNA16.4-201ENST00000516956 PHLDB1Q86UU1 1377 aa8.33□□□□□ -1.08
SCARNA16.4-201ENST00000516956 ABCA9Q8IUA7 1624 aa8.32□□□□□ -1.08
SCARNA16.4-201ENST00000516956 NCOA2Q15596 1464 aa8.32□□□□□ -1.08
SCARNA16.4-201ENST00000516956 PLCH2O75038 1416 aa8.32□□□□□ -1.08
SCARNA16.4-201ENST00000516956 MAGI3Q5TCQ9 1506 aa8.32□□□□□ -1.08
SCARNA16.4-201ENST00000516956 TSPOAP1O95153 1857 aa8.31□□□□□ -1.08
SCARNA16.4-201ENST00000516956 MYO5CQ9NQX4 1742 aa8.31□□□□□ -1.08
SCARNA16.4-201ENST00000516956 FANCAO15360 1455 aa8.31□□□□□ -1.08
SCARNA16.4-201ENST00000516956 KIF13AQ9H1H9 1805 aa8.31□□□□□ -1.08
SCARNA16.4-201ENST00000516956 TTC37Q6PGP7 1564 aa8.31□□□□□ -1.08
SCARNA16.4-201ENST00000516956 CFAP74Q9C0B2 1584 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms