RNA–Protein interactions for RNA: ENST00000516907.1

RN7SKP260-201, Transcript of RNA, 7SK small nuclear pseudogene 260, humanhuman

BASIC

Gene RN7SKP260, Length 149 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP260-201ENST00000516907 CEP170Q5SW79 1584 aa8.45□□□□□ -1.06
RN7SKP260-201ENST00000516907 CYB5RLQ6IPT4 315 aa8.45□□□□□ -1.06
RN7SKP260-201ENST00000516907 JPH4Q96JJ6 628 aa8.44□□□□□ -1.06
RN7SKP260-201ENST00000516907 RUSC2Q8N2Y8 1516 aa8.44□□□□□ -1.06
RN7SKP260-201ENST00000516907 CSRNP3Q8WYN3 585 aa8.43□□□□□ -1.06
RN7SKP260-201ENST00000516907 PRG4Q92954 1404 aaPredicted RBP8.43□□□□□ -1.06
RN7SKP260-201ENST00000516907 IQGAP2Q13576 1575 aa8.41□□□□□ -1.06
RN7SKP260-201ENST00000516907 ARAP1Q96P48 1450 aa8.41□□□□□ -1.06
RN7SKP260-201ENST00000516907 NPM1P06748 294 aaKnown RBP eCLIP8.41□□□□□ -1.06
RN7SKP260-201ENST00000516907 SHROOM2Q13796 1616 aa8.4□□□□□ -1.06
RN7SKP260-201ENST00000516907 GOLGA3Q08378 1498 aa8.4□□□□□ -1.06
RN7SKP260-201ENST00000516907 PRXQ9BXM0 1461 aa8.39□□□□□ -1.07
RN7SKP260-201ENST00000516907 TNIKQ9UKE5 1360 aa8.37□□□□□ -1.07
RN7SKP260-201ENST00000516907 PTPRGP23470 1445 aa8.36□□□□□ -1.07
RN7SKP260-201ENST00000516907 TRHP20396 242 aaPredicted RBP8.35□□□□□ -1.07
RN7SKP260-201ENST00000516907 UGGT2Q9NYU1 1516 aa8.34□□□□□ -1.07
RN7SKP260-201ENST00000516907 UBTFP17480 764 aaKnown RBP8.33□□□□□ -1.08
RN7SKP260-201ENST00000516907 CTTNBP2Q8WZ74 1663 aa8.33□□□□□ -1.08
RN7SKP260-201ENST00000516907 KIF21BO75037 1637 aa8.32□□□□□ -1.08
RN7SKP260-201ENST00000516907 TTBK1Q5TCY1 1321 aaPredicted RBP8.31□□□□□ -1.08
RN7SKP260-201ENST00000516907 KIAA0556O60303 1618 aa8.3□□□□□ -1.08
RN7SKP260-201ENST00000516907 ERCC6L2Q5T890 1561 aa8.3□□□□□ -1.08
RN7SKP260-201ENST00000516907 UACAQ9BZF9 1416 aa8.29□□□□□ -1.08
RN7SKP260-201ENST00000516907 EFCAB5A4FU69 1503 aa8.29□□□□□ -1.08
RN7SKP260-201ENST00000516907 DISP1Q96F81 1524 aa8.29□□□□□ -1.08
RN7SKP260-201ENST00000516907 UHRF1BP1LA0JNW5 1464 aa8.28□□□□□ -1.08
RN7SKP260-201ENST00000516907 ABCC2Q92887 1545 aa8.27□□□□□ -1.09
RN7SKP260-201ENST00000516907 MAPKBP1O60336 1514 aa8.26□□□□□ -1.09
RN7SKP260-201ENST00000516907 PLB1Q6P1J6 1458 aa8.26□□□□□ -1.09
RN7SKP260-201ENST00000516907 FMN1Q68DA7 1419 aa8.24□□□□□ -1.09
RN7SKP260-201ENST00000516907 RANGAP1P46060 587 aaPredicted RBP8.24□□□□□ -1.09
RN7SKP260-201ENST00000516907 SAMD9Q5K651 1589 aa8.22□□□□□ -1.09
RN7SKP260-201ENST00000516907 ADCY10Q96PN6 1610 aa8.22□□□□□ -1.09
RN7SKP260-201ENST00000516907 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.22□□□□□ -1.09
RN7SKP260-201ENST00000516907 FAM69CQ0P6D2 419 aa8.22□□□□□ -1.09
RN7SKP260-201ENST00000516907 HNRNPUL2Q1KMD3 747 aaKnown RBP8.22□□□□□ -1.09
RN7SKP260-201ENST00000516907 P3H3Q8IVL6 736 aa8.22□□□□□ -1.09
RN7SKP260-201ENST00000516907 EHMT2Q96KQ7 1210 aa8.22□□□□□ -1.09
RN7SKP260-201ENST00000516907 KDM5BQ9UGL1 1544 aa8.22□□□□□ -1.09
RN7SKP260-201ENST00000516907 ABCC10Q5T3U5 1492 aa8.21□□□□□ -1.09
RN7SKP260-201ENST00000516907 CDK11AQ9UQ88 783 aaPredicted RBP8.21□□□□□ -1.1
RN7SKP260-201ENST00000516907 ASXL2Q76L83 1435 aa8.2□□□□□ -1.1
RN7SKP260-201ENST00000516907 FHOD3Q2V2M9 1422 aa8.19□□□□□ -1.1
RN7SKP260-201ENST00000516907 WDR7Q9Y4E6 1490 aa8.19□□□□□ -1.1
RN7SKP260-201ENST00000516907 ABCA8O94911 1581 aa8.18□□□□□ -1.1
RN7SKP260-201ENST00000516907 TEX14Q8IWB6 1497 aa8.18□□□□□ -1.1
RN7SKP260-201ENST00000516907 PLEKHD1A6NEE1 506 aa8.17□□□□□ -1.1
RN7SKP260-201ENST00000516907 ATP1B4Q9UN42 357 aaPredicted RBP8.17□□□□□ -1.1
RN7SKP260-201ENST00000516907 CLIP1P30622 1438 aa8.17□□□□□ -1.1
RN7SKP260-201ENST00000516907 RAPGEF6Q8TEU7 1601 aa8.17□□□□□ -1.1
RN7SKP260-201ENST00000516907 ZCCHC11Q5TAX3 1644 aaKnown RBP8.16□□□□□ -1.1
RN7SKP260-201ENST00000516907 HECW1Q76N89 1606 aa8.16□□□□□ -1.1
RN7SKP260-201ENST00000516907 DIP2BQ9P265 1576 aa8.16□□□□□ -1.1
RN7SKP260-201ENST00000516907 GLI2P10070 1586 aa8.15□□□□□ -1.1
RN7SKP260-201ENST00000516907 EPRSP07814 1512 aaKnown RBP8.14□□□□□ -1.11
RN7SKP260-201ENST00000516907 CCDC18Q5T9S5 1454 aa8.14□□□□□ -1.11
RN7SKP260-201ENST00000516907 ARHGAP35Q9NRY4 1499 aa8.14□□□□□ -1.11
RN7SKP260-201ENST00000516907 KCNH8Q96L42 1107 aa8.13□□□□□ -1.11
RN7SKP260-201ENST00000516907 NUP153P49790 1475 aaKnown RBP8.13□□□□□ -1.11
RN7SKP260-201ENST00000516907 PHLDB1Q86UU1 1377 aa8.12□□□□□ -1.11
RN7SKP260-201ENST00000516907 ARID3CA6NKF2 412 aa8.12□□□□□ -1.11
RN7SKP260-201ENST00000516907 ATP10BO94823 1461 aa8.12□□□□□ -1.11
RN7SKP260-201ENST00000516907 FYCO1Q9BQS8 1478 aa8.12□□□□□ -1.11
RN7SKP260-201ENST00000516907 CD109Q6YHK3 1445 aa8.12□□□□□ -1.11
RN7SKP260-201ENST00000516907 CASKIN1Q8WXD9 1431 aa8.12□□□□□ -1.11
RN7SKP260-201ENST00000516907 CEP162Q5TB80 1403 aa8.11□□□□□ -1.11
RN7SKP260-201ENST00000516907 APLP2Q06481 763 aa8.1□□□□□ -1.11
RN7SKP260-201ENST00000516907 CFAP43Q8NDM7 1665 aa8.09□□□□□ -1.11
RN7SKP260-201ENST00000516907 MAGI3Q5TCQ9 1506 aa8.08□□□□□ -1.12
RN7SKP260-201ENST00000516907 KIF13AQ9H1H9 1805 aa8.08□□□□□ -1.12
RN7SKP260-201ENST00000516907 KDM6BO15054 1643 aa8.07□□□□□ -1.12
RN7SKP260-201ENST00000516907 MAP3K4Q9Y6R4 1608 aa8.07□□□□□ -1.12
RN7SKP260-201ENST00000516907 NEO1Q92859 1461 aa8.06□□□□□ -1.12
RN7SKP260-201ENST00000516907 CFAP74Q9C0B2 1584 aa8.06□□□□□ -1.12
RN7SKP260-201ENST00000516907 TROQ12816 1431 aaPredicted RBP8.06□□□□□ -1.12
RN7SKP260-201ENST00000516907 KIF14Q15058 1648 aa8.06□□□□□ -1.12
RN7SKP260-201ENST00000516907 CDK13Q14004 1512 aaKnown RBP8.05□□□□□ -1.12
RN7SKP260-201ENST00000516907 ABCA9Q8IUA7 1624 aa8.05□□□□□ -1.12
RN7SKP260-201ENST00000516907 MTUS2Q5JR59 1369 aa8.05□□□□□ -1.12
RN7SKP260-201ENST00000516907 PCF11O94913 1555 aaKnown RBP8.05□□□□□ -1.12
RN7SKP260-201ENST00000516907 VPS8Q8N3P4 1428 aa8.03□□□□□ -1.12
RN7SKP260-201ENST00000516907 EFCAB2Q5VUJ9 269 aa8.03□□□□□ -1.12
RN7SKP260-201ENST00000516907 FANCAO15360 1455 aa8.02□□□□□ -1.13
RN7SKP260-201ENST00000516907 ARAP3Q8WWN8 1544 aa8.02□□□□□ -1.13
RN7SKP260-201ENST00000516907 TSPOAP1O95153 1857 aa8.01□□□□□ -1.13
RN7SKP260-201ENST00000516907 LOC105371045A0A1W2PR82 267 aa8.01□□□□□ -1.13
RN7SKP260-201ENST00000516907 PLCH2O75038 1416 aa8.01□□□□□ -1.13
RN7SKP260-201ENST00000516907 CCNB3Q8WWL7 1395 aa8□□□□□ -1.13
RN7SKP260-201ENST00000516907 EHBP1L1Q8N3D4 1523 aa8□□□□□ -1.13
RN7SKP260-201ENST00000516907 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8□□□□□ -1.13
RN7SKP260-201ENST00000516907 AEBP2Q6ZN18 517 aaPredicted RBP8□□□□□ -1.13
RN7SKP260-201ENST00000516907 DENND4BO75064 1496 aaPredicted RBP8□□□□□ -1.13
RN7SKP260-201ENST00000516907 ARHGAP5Q13017 1502 aa7.99□□□□□ -1.13
RN7SKP260-201ENST00000516907 AKNAQ7Z591 1439 aa7.99□□□□□ -1.13
RN7SKP260-201ENST00000516907 ADGRL1O94910 1474 aa7.99□□□□□ -1.13
RN7SKP260-201ENST00000516907 PLEKHH2Q8IVE3 1493 aa7.99□□□□□ -1.13
RN7SKP260-201ENST00000516907 MYT1LQ9UL68 1186 aa7.98□□□□□ -1.13
RN7SKP260-201ENST00000516907 TTC37Q6PGP7 1564 aa7.97□□□□□ -1.13
RN7SKP260-201ENST00000516907 CFDP1Q9UEE9 299 aaPredicted RBP7.97□□□□□ -1.13
RN7SKP260-201ENST00000516907 MAGI2Q86UL8 1455 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms