RNA–Protein interactions for RNA: ENST00000516907.1

RN7SKP260-201, Transcript of RNA, 7SK small nuclear pseudogene 260, humanhuman

BASIC

Gene RN7SKP260, Length 149 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP260-201ENST00000516907 NISCHQ9Y2I1 1504 aa12.16□□□□□ -0.46
RN7SKP260-201ENST00000516907 CCDC180Q9P1Z9 1646 aa10.84□□□□□ -0.67
RN7SKP260-201ENST00000516907 ABCC9O60706 1549 aa10.56□□□□□ -0.72
RN7SKP260-201ENST00000516907 RB1CC1Q8TDY2 1594 aa10.24□□□□□ -0.77
RN7SKP260-201ENST00000516907 NACADO15069 1562 aa10.22□□□□□ -0.77
RN7SKP260-201ENST00000516907 DCAF8L2P0C7V8 631 aa10.22□□□□□ -0.77
RN7SKP260-201ENST00000516907 MYO15BQ96JP2 1530 aa10.17□□□□□ -0.78
RN7SKP260-201ENST00000516907 ZCCHC6Q5VYS8 1495 aaKnown RBP10.13□□□□□ -0.79
RN7SKP260-201ENST00000516907 DCAF1Q9Y4B6 1507 aa10.11□□□□□ -0.79
RN7SKP260-201ENST00000516907 SHROOM4Q9ULL8 1493 aa9.9□□□□□ -0.83
RN7SKP260-201ENST00000516907 PABPN1Q86U42 306 aaKnown RBP eCLIP9.84□□□□□ -0.83
RN7SKP260-201ENST00000516907 SCRIBQ14160 1630 aa9.84□□□□□ -0.83
RN7SKP260-201ENST00000516907 UNC13AQ9UPW8 1703 aa9.79□□□□□ -0.84
RN7SKP260-201ENST00000516907 BICRAQ9NZM4 1560 aa9.77□□□□□ -0.85
RN7SKP260-201ENST00000516907 EIF4G1Q04637 1599 aaKnown RBP9.6□□□□□ -0.87
RN7SKP260-201ENST00000516907 DNAJC5BQ9UF47 199 aa9.54□□□□□ -0.88
RN7SKP260-201ENST00000516907 CECR2Q9BXF3 1484 aa9.53□□□□□ -0.88
RN7SKP260-201ENST00000516907 CC2D2AQ9P2K1 1620 aa9.53□□□□□ -0.88
RN7SKP260-201ENST00000516907 BAZ1AQ9NRL2 1556 aaPredicted RBP9.49□□□□□ -0.89
RN7SKP260-201ENST00000516907 SMARCA2P51531 1590 aa9.45□□□□□ -0.9
RN7SKP260-201ENST00000516907 SMARCA4P51532 1647 aa9.42□□□□□ -0.9
RN7SKP260-201ENST00000516907 NCAPD3P42695 1498 aa9.4□□□□□ -0.9
RN7SKP260-201ENST00000516907 HMGXB3Q12766 1538 aa9.38□□□□□ -0.91
RN7SKP260-201ENST00000516907 ATAD2BQ9ULI0 1458 aa9.38□□□□□ -0.91
RN7SKP260-201ENST00000516907 BAZ1BQ9UIG0 1483 aaKnown RBP9.37□□□□□ -0.91
RN7SKP260-201ENST00000516907 PEG3Q9GZU2 1588 aa9.34□□□□□ -0.91
RN7SKP260-201ENST00000516907 MROH2BQ7Z745 1585 aa9.31□□□□□ -0.92
RN7SKP260-201ENST00000516907 RSF1Q96T23 1441 aaPredicted RBP9.24□□□□□ -0.93
RN7SKP260-201ENST00000516907 ERCC6Q03468 1493 aa9.21□□□□□ -0.93
RN7SKP260-201ENST00000516907 TOP2AP11388 1531 aaKnown RBP9.2□□□□□ -0.94
RN7SKP260-201ENST00000516907 WIZO95785 1651 aa9.19□□□□□ -0.94
RN7SKP260-201ENST00000516907 LAMC3Q9Y6N6 1575 aa9.18□□□□□ -0.94
RN7SKP260-201ENST00000516907 PDS5BQ9NTI5 1447 aa9.17□□□□□ -0.94
RN7SKP260-201ENST00000516907 CADPSQ9ULU8 1353 aa9.14□□□□□ -0.95
RN7SKP260-201ENST00000516907 CUX2O14529 1486 aa9.1□□□□□ -0.95
RN7SKP260-201ENST00000516907 NESP48681 1621 aa9.08□□□□□ -0.96
RN7SKP260-201ENST00000516907 CFTRP13569 1480 aa9.07□□□□□ -0.96
RN7SKP260-201ENST00000516907 SUPT5HO00267 1087 aaKnown RBP9.06□□□□□ -0.96
RN7SKP260-201ENST00000516907 CEP164Q9UPV0 1460 aa9.05□□□□□ -0.96
RN7SKP260-201ENST00000516907 CCDC88BA6NC98 1476 aa9.03□□□□□ -0.96
RN7SKP260-201ENST00000516907 FANCD2Q9BXW9 1451 aa9.02□□□□□ -0.96
RN7SKP260-201ENST00000516907 MRC2Q9UBG0 1479 aa9.02□□□□□ -0.96
RN7SKP260-201ENST00000516907 ABCC8Q09428 1581 aa8.98□□□□□ -0.97
RN7SKP260-201ENST00000516907 THOC2Q8NI27 1593 aaKnown RBP8.97□□□□□ -0.97
RN7SKP260-201ENST00000516907 KIF21AQ7Z4S6 1674 aa8.97□□□□□ -0.97
RN7SKP260-201ENST00000516907 WDR62O43379 1518 aa8.96□□□□□ -0.97
RN7SKP260-201ENST00000516907 PRDM2Q13029 1718 aa8.94□□□□□ -0.98
RN7SKP260-201ENST00000516907 DNMBPQ6XZF7 1577 aa8.88□□□□□ -0.99
RN7SKP260-201ENST00000516907 URB2Q14146 1524 aaKnown RBP8.87□□□□□ -0.99
RN7SKP260-201ENST00000516907 IFT140Q96RY7 1462 aa8.87□□□□□ -0.99
RN7SKP260-201ENST00000516907 TOPBP1Q92547 1522 aa8.85□□□□□ -0.99
RN7SKP260-201ENST00000516907 WDR97A6NE52 1622 aa8.79□□□□□ -1
RN7SKP260-201ENST00000516907 SOGA1O94964 1423 aa8.79□□□□□ -1
RN7SKP260-201ENST00000516907 WRNQ14191 1432 aaPredicted RBP eCLIP8.79□□□□□ -1
RN7SKP260-201ENST00000516907 POLA1P09884 1462 aaPredicted RBP8.78□□□□□ -1
RN7SKP260-201ENST00000516907 FGD5Q6ZNL6 1462 aa8.77□□□□□ -1.01
RN7SKP260-201ENST00000516907 CUX1P39880 1505 aa8.75□□□□□ -1.01
RN7SKP260-201ENST00000516907 DNAJC5Q9H3Z4 198 aa8.74□□□□□ -1.01
RN7SKP260-201ENST00000516907 OSCARQ8IYS5 282 aa8.73□□□□□ -1.01
RN7SKP260-201ENST00000516907 TOP2BQ02880 1626 aa8.72□□□□□ -1.01
RN7SKP260-201ENST00000516907 EIF4G3O43432 1585 aaKnown RBP8.72□□□□□ -1.01
RN7SKP260-201ENST00000516907 TARBP1Q13395 1621 aaKnown RBP8.71□□□□□ -1.02
RN7SKP260-201ENST00000516907 GRIN2BQ13224 1484 aa8.7□□□□□ -1.02
RN7SKP260-201ENST00000516907 RAD54L2Q9Y4B4 1467 aa8.7□□□□□ -1.02
RN7SKP260-201ENST00000516907 ABCA10Q8WWZ4 1543 aa8.7□□□□□ -1.02
RN7SKP260-201ENST00000516907 ZNF608Q9ULD9 1512 aaPredicted RBP8.7□□□□□ -1.02
RN7SKP260-201ENST00000516907 BIVM-ERCC5R4GMW8 1640 aa8.7□□□□□ -1.02
RN7SKP260-201ENST00000516907 TDRD9Q8NDG6 1382 aaKnown RBP8.7□□□□□ -1.02
RN7SKP260-201ENST00000516907 MAGI1Q96QZ7 1491 aaPredicted RBP8.7□□□□□ -1.02
RN7SKP260-201ENST00000516907 AQRO60306 1485 aaKnown RBP eCLIP8.69□□□□□ -1.02
RN7SKP260-201ENST00000516907 GAPVD1Q14C86 1478 aa8.69□□□□□ -1.02
RN7SKP260-201ENST00000516907 FBLN2P98095 1184 aa8.68□□□□□ -1.02
RN7SKP260-201ENST00000516907 CHMP7Q8WUX9 453 aaPredicted RBP8.68□□□□□ -1.02
RN7SKP260-201ENST00000516907 SYNJ1O43426 1573 aa8.66□□□□□ -1.02
RN7SKP260-201ENST00000516907 SYNJ2O15056 1496 aa8.64□□□□□ -1.03
RN7SKP260-201ENST00000516907 SNAPC4Q5SXM2 1469 aa8.64□□□□□ -1.03
RN7SKP260-201ENST00000516907 KIF27Q86VH2 1401 aa8.64□□□□□ -1.03
RN7SKP260-201ENST00000516907 ERICH3Q5RHP9 1530 aa8.63□□□□□ -1.03
RN7SKP260-201ENST00000516907 ABCA5Q8WWZ7 1642 aa8.62□□□□□ -1.03
RN7SKP260-201ENST00000516907 TRIM41Q8WV44 630 aa8.62□□□□□ -1.03
RN7SKP260-201ENST00000516907 FHAD1B1AJZ9 1412 aa8.61□□□□□ -1.03
RN7SKP260-201ENST00000516907 PBRM1Q86U86 1689 aa8.59□□□□□ -1.03
RN7SKP260-201ENST00000516907 GRIN2AQ12879 1464 aa8.57□□□□□ -1.04
RN7SKP260-201ENST00000516907 ADAMTS12P58397 1594 aa8.56□□□□□ -1.04
RN7SKP260-201ENST00000516907 CHIC1Q5VXU3 224 aa8.56□□□□□ -1.04
RN7SKP260-201ENST00000516907 CHD1O14646 1710 aa8.55□□□□□ -1.04
RN7SKP260-201ENST00000516907 CUL7Q14999 1698 aa8.55□□□□□ -1.04
RN7SKP260-201ENST00000516907 EEA1Q15075 1411 aa8.53□□□□□ -1.04
RN7SKP260-201ENST00000516907 FAM9AQ8IZU1 332 aaPredicted RBP8.52□□□□□ -1.05
RN7SKP260-201ENST00000516907 IGF1RP08069 1367 aa8.51□□□□□ -1.05
RN7SKP260-201ENST00000516907 CARMIL1Q5VZK9 1371 aa8.51□□□□□ -1.05
RN7SKP260-201ENST00000516907 ARHGEF11O15085 1522 aa8.51□□□□□ -1.05
RN7SKP260-201ENST00000516907 NUP160Q12769 1436 aa8.51□□□□□ -1.05
RN7SKP260-201ENST00000516907 CLASP1Q7Z460 1538 aa8.5□□□□□ -1.05
RN7SKP260-201ENST00000516907 RAPGEF2Q9Y4G8 1499 aa8.47□□□□□ -1.05
RN7SKP260-201ENST00000516907 KIAA0586Q9BVV6 1533 aa8.47□□□□□ -1.05
RN7SKP260-201ENST00000516907 RIMBP3CA6NJZ7 1639 aa8.47□□□□□ -1.05
RN7SKP260-201ENST00000516907 RIMBP3BA6NNM3 1639 aa8.47□□□□□ -1.05
RN7SKP260-201ENST00000516907 RIMBP3Q9UFD9 1639 aa8.47□□□□□ -1.05
RN7SKP260-201ENST00000516907 CARMIL2Q6F5E8 1435 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms