RNA–Protein interactions for RNA: ENST00000515859.5

TUSC3-213, Transcript of tumor suppressor candidate 3, humanhuman

TSL 5

Gene TUSC3, Length 1,627 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-213ENST00000515859 NUP160Q12769 1436 aa39.77■■■■□ 3.96
TUSC3-213ENST00000515859 CHD1O14646 1710 aa39.74■■■■□ 3.95
TUSC3-213ENST00000515859 KIAA0586Q9BVV6 1533 aa39.72■■■■□ 3.95
TUSC3-213ENST00000515859 CLIP1P30622 1438 aa39.7■■■■□ 3.95
TUSC3-213ENST00000515859 CEP170Q5SW79 1584 aa39.69■■■■□ 3.94
TUSC3-213ENST00000515859 IQGAP2Q13576 1575 aa39.65■■■■□ 3.94
TUSC3-213ENST00000515859 RANGAP1P46060 587 aaPredicted RBP39.64■■■■□ 3.94
TUSC3-213ENST00000515859 EFCAB5A4FU69 1503 aa39.5■■■■□ 3.91
TUSC3-213ENST00000515859 ARHGAP35Q9NRY4 1499 aa39.49■■■■□ 3.91
TUSC3-213ENST00000515859 UGGT2Q9NYU1 1516 aa39.48■■■■□ 3.91
TUSC3-213ENST00000515859 JPH4Q96JJ6 628 aa39.44■■■■□ 3.9
TUSC3-213ENST00000515859 OSCARQ8IYS5 282 aa39.41■■■■□ 3.9
TUSC3-213ENST00000515859 SAMD9Q5K651 1589 aa39.39■■■■□ 3.9
TUSC3-213ENST00000515859 CLASP1Q7Z460 1538 aa39.37■■■■□ 3.89
TUSC3-213ENST00000515859 ARAP1Q96P48 1450 aa39.35■■■■□ 3.89
TUSC3-213ENST00000515859 P3H3Q8IVL6 736 aa39.31■■■■□ 3.88
TUSC3-213ENST00000515859 DISP1Q96F81 1524 aa39.28■■■■□ 3.88
TUSC3-213ENST00000515859 CARMIL2Q6F5E8 1435 aa39.28■■■■□ 3.88
TUSC3-213ENST00000515859 SHROOM2Q13796 1616 aa39.26■■■■□ 3.88
TUSC3-213ENST00000515859 FHOD3Q2V2M9 1422 aa39.26■■■■□ 3.87
TUSC3-213ENST00000515859 VPS8Q8N3P4 1428 aa39.26■■■■□ 3.87
TUSC3-213ENST00000515859 KIAA0556O60303 1618 aa39.23■■■■□ 3.87
TUSC3-213ENST00000515859 PRG4Q92954 1404 aaPredicted RBP39.21■■■■□ 3.87
TUSC3-213ENST00000515859 FMN1Q68DA7 1419 aa39.17■■■■□ 3.86
TUSC3-213ENST00000515859 CASKIN1Q8WXD9 1431 aa38.97■■■■□ 3.83
TUSC3-213ENST00000515859 ERCC6L2Q5T890 1561 aa38.94■■■■□ 3.82
TUSC3-213ENST00000515859 PTPRGP23470 1445 aa38.93■■■■□ 3.82
TUSC3-213ENST00000515859 FYCO1Q9BQS8 1478 aa38.93■■■■□ 3.82
TUSC3-213ENST00000515859 APLP2Q06481 763 aa38.91■■■■□ 3.82
TUSC3-213ENST00000515859 TTBK1Q5TCY1 1321 aaPredicted RBP38.9■■■■□ 3.82
TUSC3-213ENST00000515859 PCF11O94913 1555 aaKnown RBP38.9■■■■□ 3.82
TUSC3-213ENST00000515859 ATP1B4Q9UN42 357 aaPredicted RBP38.82■■■■□ 3.81
TUSC3-213ENST00000515859 RAPGEF6Q8TEU7 1601 aa38.77■■■■□ 3.8
TUSC3-213ENST00000515859 PLB1Q6P1J6 1458 aa38.76■■■■□ 3.8
TUSC3-213ENST00000515859 MAP3K1Q13233 1512 aa38.76■■■■□ 3.79
TUSC3-213ENST00000515859 HECW1Q76N89 1606 aa38.75■■■■□ 3.79
TUSC3-213ENST00000515859 ABCA8O94911 1581 aa38.73■■■■□ 3.79
TUSC3-213ENST00000515859 UACAQ9BZF9 1416 aa38.7■■■■□ 3.79
TUSC3-213ENST00000515859 CCDC18Q5T9S5 1454 aa38.68■■■■□ 3.78
TUSC3-213ENST00000515859 ARHGEF11O15085 1522 aa38.67■■■■□ 3.78
TUSC3-213ENST00000515859 NUP153P49790 1475 aaKnown RBP38.67■■■■□ 3.78
TUSC3-213ENST00000515859 TIAM1Q13009 1591 aa38.65■■■■□ 3.78
TUSC3-213ENST00000515859 EPRSP07814 1512 aaKnown RBP38.63■■■■□ 3.77
TUSC3-213ENST00000515859 CFAP43Q8NDM7 1665 aa38.59■■■■□ 3.77
TUSC3-213ENST00000515859 UHRF1BP1LA0JNW5 1464 aa38.57■■■■□ 3.77
TUSC3-213ENST00000515859 ABCC2Q92887 1545 aa38.57■■■■□ 3.76
TUSC3-213ENST00000515859 PPARGC1BQ86YN6 1023 aaKnown RBP38.56■■■■□ 3.76
TUSC3-213ENST00000515859 LRRIQ1Q96JM4 1722 aa38.55■■■■□ 3.76
TUSC3-213ENST00000515859 KANK4Q5T7N3 995 aaPredicted RBP38.53■■■■□ 3.76
TUSC3-213ENST00000515859 LRRC9Q6ZRR7 1453 aa38.51■■■■□ 3.76
TUSC3-213ENST00000515859 RIMBP3CA6NJZ7 1639 aa38.5■■■■□ 3.75
TUSC3-213ENST00000515859 RIMBP3BA6NNM3 1639 aa38.5■■■■□ 3.75
TUSC3-213ENST00000515859 RIMBP3Q9UFD9 1639 aa38.5■■■■□ 3.75
TUSC3-213ENST00000515859 CDK13Q14004 1512 aaKnown RBP38.49■■■■□ 3.75
TUSC3-213ENST00000515859 ARID3CA6NKF2 412 aa38.49■■■■□ 3.75
TUSC3-213ENST00000515859 CDK11AQ9UQ88 783 aaPredicted RBP38.48■■■■□ 3.75
TUSC3-213ENST00000515859 ATP10BO94823 1461 aa38.47■■■■□ 3.75
TUSC3-213ENST00000515859 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.46■■■■□ 3.75
TUSC3-213ENST00000515859 HNRNPUL2Q1KMD3 747 aaKnown RBP38.46■■■■□ 3.75
TUSC3-213ENST00000515859 MTUS2Q5JR59 1369 aa38.43■■■■□ 3.74
TUSC3-213ENST00000515859 KDM5BQ9UGL1 1544 aa38.38■■■■□ 3.73
TUSC3-213ENST00000515859 ADCY10Q96PN6 1610 aa38.38■■■■□ 3.73
TUSC3-213ENST00000515859 EHBP1L1Q8N3D4 1523 aa38.36■■■■□ 3.73
TUSC3-213ENST00000515859 CYB5RLQ6IPT4 315 aa38.33■■■■□ 3.73
TUSC3-213ENST00000515859 PLEKHD1A6NEE1 506 aa38.32■■■■□ 3.73
TUSC3-213ENST00000515859 MAGI3Q5TCQ9 1506 aa38.31■■■■□ 3.72
TUSC3-213ENST00000515859 TROQ12816 1431 aaPredicted RBP38.27■■■■□ 3.72
TUSC3-213ENST00000515859 ZCCHC11Q5TAX3 1644 aaKnown RBP38.25■■■■□ 3.71
TUSC3-213ENST00000515859 NPM1P06748 294 aaKnown RBP eCLIP38.24■■■■□ 3.71
TUSC3-213ENST00000515859 SUPT6HQ7KZ85 1726 aaKnown RBP38.19■■■■□ 3.7
TUSC3-213ENST00000515859 TRIM26Q12899 539 aaPredicted RBP38.19■■■■□ 3.7
TUSC3-213ENST00000515859 NCOA2Q15596 1464 aa38.16■■■■□ 3.7
TUSC3-213ENST00000515859 PHLDB1Q86UU1 1377 aa38.08■■■■□ 3.69
TUSC3-213ENST00000515859 DNAJC5Q9H3Z4 198 aa38.08■■■■□ 3.69
TUSC3-213ENST00000515859 KIF14Q15058 1648 aa38.05■■■■□ 3.68
TUSC3-213ENST00000515859 WDR7Q9Y4E6 1490 aa38.03■■■■□ 3.68
TUSC3-213ENST00000515859 ASXL2Q76L83 1435 aa38.01■■■■□ 3.68
TUSC3-213ENST00000515859 MYOM3Q5VTT5 1437 aa37.98■■■■□ 3.67
TUSC3-213ENST00000515859 RRBP1Q9P2E9 1410 aaKnown RBP37.98■■■■□ 3.67
TUSC3-213ENST00000515859 CCNB3Q8WWL7 1395 aa37.96■■■■□ 3.67
TUSC3-213ENST00000515859 KCNH8Q96L42 1107 aa37.95■■■■□ 3.67
TUSC3-213ENST00000515859 ABCC10Q5T3U5 1492 aa37.94■■■■□ 3.66
TUSC3-213ENST00000515859 MAPKBP1O60336 1514 aa37.93■■■■□ 3.66
TUSC3-213ENST00000515859 FGD6Q6ZV73 1430 aa37.9■■■■□ 3.66
TUSC3-213ENST00000515859 MIA2Q96PC5 1412 aa37.88■■■■□ 3.65
TUSC3-213ENST00000515859 PCGF6Q9BYE7 350 aa37.87■■■■□ 3.65
TUSC3-213ENST00000515859 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.86■■■■□ 3.659e-7■■■□□ 17.5
TUSC3-213ENST00000515859 GPATCH8Q9UKJ3 1502 aaKnown RBP37.86■■■■□ 3.65
TUSC3-213ENST00000515859 ITSN2Q9NZM3 1697 aa37.81■■■■□ 3.64
TUSC3-213ENST00000515859 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.81■■■■□ 3.64
TUSC3-213ENST00000515859 CFDP1Q9UEE9 299 aaPredicted RBP37.79■■■■□ 3.64
TUSC3-213ENST00000515859 TTC37Q6PGP7 1564 aa37.77■■■■□ 3.64
TUSC3-213ENST00000515859 CDC42BPAQ5VT25 1732 aa37.74■■■■□ 3.63
TUSC3-213ENST00000515859 FAM50AQ14320 339 aaKnown RBP37.74■■■■□ 3.63
TUSC3-213ENST00000515859 ABCA9Q8IUA7 1624 aa37.73■■■■□ 3.63
TUSC3-213ENST00000515859 PTPN23Q9H3S7 1636 aa37.73■■■■□ 3.63
TUSC3-213ENST00000515859 TCOF1Q13428 1488 aaKnown RBP37.72■■■■□ 3.63
TUSC3-213ENST00000515859 PLCH2O75038 1416 aa37.7■■■■□ 3.63
TUSC3-213ENST00000515859 PREX2Q70Z35 1606 aa37.68■■■■□ 3.62
TUSC3-213ENST00000515859 MYO5CQ9NQX4 1742 aa37.67■■■■□ 3.62
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms